Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0083 Ceratophyllum demersum HOM05D002569 ORTHO05D020107 4.4e-49 197.6 96 100.0
MBI19_g25424_MAGBIO Magnolia biondii HOM05D002569 ORTHO05D006728 1.1e-20 103.2 51 90.2
AUR62000100 Chenopodium quinoa HOM05D002569 ORTHO05D006728 2.5e-20 102.1 52 90.4
AUR62019274 Chenopodium quinoa HOM05D002569 ORTHO05D006728 2.5e-20 102.1 52 90.4
Lj3g0027520 Lotus japonicus HOM05D002569 ORTHO05D006728 4.3e-20 101.3 52 90.4
Migut.D00584 Erythranthe guttata HOM05D002569 ORTHO05D006728 5.6e-20 100.9 52 88.5
TAR369G0083 Trochodendron aralioides HOM05D002569 ORTHO05D006728 7.3e-20 100.5 52 88.5
TAR376G0263 Trochodendron aralioides HOM05D002569 ORTHO05D006728 7.3e-20 100.5 52 88.5
AagrBONN_evm.TU.Sc2ySwM_117.1129 Anthoceros agrestis HOM05D002569 ORTHO05D006728 9.5e-20 100.1 52 86.5
Lj1A347T9 Lonicera japonica HOM05D002569 ORTHO05D006728 1.2e-19 99.8 52 90.4
Ca_01289_v3 Cicer arietinum L. HOM05D002569 ORTHO05D006728 1.6e-19 99.4 52 88.5
Mapoly0001s0065 Marchantia polymorpha HOM05D002569 ORTHO05D006728 1.6e-19 99.4 56 80.4
Medtr2g098110 Medicago truncatula HOM05D002569 ORTHO05D006728 1.6e-19 99.4 52 88.5
Cc07_g19440 Coffea canephora HOM05D002569 ORTHO05D006728 2.1e-19 99.0 52 90.4
Zm00001eb236320 Zea mays HOM05D002569 ORTHO05D006728 2.1e-19 99.0 52 84.6
CBR_g49553 Chara braunii HOM05D002569 ORTHO05D006728 2.8e-19 98.6 52 82.7
Prupe.6G023900 Prunus persica HOM05D002569 ORTHO05D006728 2.8e-19 98.6 52 88.5
Pp3c3_3200 Physcomitrium patens HOM05D002569 ORTHO05D006728 6.2e-19 97.4 52 82.7
GSVIVG01025300001 Vitis vinifera HOM05D002569 ORTHO05D006728 6.2e-19 97.4 52 86.5
Carub.0006s1797 Capsella rubella HOM05D002569 ORTHO05D006728 8.1e-19 97.1 52 86.5
Hma1.2p1_0027F.1_g017160 Hydrangea macrophylla HOM05D002569 ORTHO05D006728 8.1e-19 97.1 51 86.3
SMO351G0337 Selaginella moellendorffii HOM05D002569 ORTHO05D006728 8.1e-19 97.1 52 84.6
Eucgr.J00787 Eucalyptus grandis HOM05D002569 ORTHO05D006728 1.1e-18 96.7 52 86.5
TPR.G6861 Trifolium pratense HOM05D002569 ORTHO05D006728 1.1e-18 96.7 52 86.5
AL6G31130 Arabidopsis lyrata HOM05D002569 ORTHO05D006728 1.4e-18 96.3 52 86.5
AT5G19620 Arabidopsis thaliana HOM05D002569 ORTHO05D006728 1.4e-18 96.3 52 86.5
FvH4_3g43030 Fragaria vesca HOM05D002569 ORTHO05D006728 1.4e-18 96.3 52 86.5
FAN17G2435 Fragaria x ananassa HOM05D002569 ORTHO05D006728 1.4e-18 96.3 52 86.5
FAN25G0456 Fragaria x ananassa HOM05D002569 ORTHO05D006728 1.4e-18 96.3 52 86.5
MD11G1029600 Malus domestica HOM05D002569 ORTHO05D006728 1.4e-18 96.3 52 84.6
PGR119G1481 Punica granatum HOM05D002569 ORTHO05D006728 1.4e-18 96.3 52 86.5
RcHm_v2.0_Chr5g0077091 Rosa chinensis HOM05D002569 ORTHO05D006728 1.4e-18 96.3 52 86.5
ClCG02G023340 Citrullus lanatus HOM05D002569 ORTHO05D006728 1.8e-18 95.9 52 84.6
Aa31LG1G18950 Aethionema arabicum HOM05D002569 ORTHO05D006728 3.1e-18 95.1 52 84.6
Lsat_1_v5_gn_6_47261 Lactuca sativa HOM05D002569 ORTHO05D006728 3.1e-18 95.1 52 86.5
CAN.G288.3 Capsicum annuum HOM05D002569 ORTHO05D006728 4.0e-18 94.7 52 86.5
Solyc10g079290.2 Solanum lycopersicum HOM05D002569 ORTHO05D006728 4.0e-18 94.7 52 86.5
Sopen10g029940 Solanum pennellii HOM05D002569 ORTHO05D006728 4.0e-18 94.7 52 86.5
PGSC0003DMG400008142 Solanum tuberosum HOM05D002569 ORTHO05D006728 4.0e-18 94.7 52 86.5
Peaxi162Scf00029g02913 Petunia axillaris HOM05D002569 ORTHO05D006728 5.2e-18 94.4 52 84.6
Rhsim13G0223300 Rhododendron simsii HOM05D002569 ORTHO05D006728 5.2e-18 94.4 52 84.6
Solyc11g062070.3 Solanum lycopersicum HOM05D002569 ORTHO05D006728 5.2e-18 94.4 52 86.5
Sopen11g024050 Solanum pennellii HOM05D002569 ORTHO05D006728 5.2e-18 94.4 52 86.5
vmacro04196 Vaccinium macrocarpon HOM05D002569 ORTHO05D020107 5.2e-18 94.4 52 84.6
CSS0021823 Camellia sinensis var. sinensis HOM05D002569 ORTHO05D006728 6.8e-18 94.0 52 82.7
CSS0039826 Camellia sinensis var. sinensis HOM05D002569 ORTHO05D006728 6.8e-18 94.0 52 82.7
Potri.003G204900 Populus trichocarpa HOM05D002569 ORTHO05D006728 6.8e-18 94.0 52 86.5
Duzib150G1640 Durio zibethinus HOM05D002569 ORTHO05D006728 8.9e-18 93.6 55 80.0
Sabra03G0151500 Salix brachista HOM05D002569 ORTHO05D006728 8.9e-18 93.6 52 86.5
ATR0605G270 Amborella trichopoda HOM05D002569 ORTHO05D006728 1.2e-17 93.2 53 81.1
COL.COLO4_24854 Corchorus olitorius HOM05D002569 ORTHO05D006728 1.2e-17 93.2 52 84.6
CsaV3_4G024160 Cucumis sativus L. HOM05D002569 ORTHO05D006728 1.2e-17 93.2 55 76.4
Gohir.A05G068400 Gossypium hirsutum HOM05D002569 ORTHO05D006728 1.2e-17 93.2 52 84.6
Gohir.D05G071400 Gossypium hirsutum HOM05D002569 ORTHO05D006728 1.2e-17 93.2 52 84.6
Gorai.009G072400 Gossypium raimondii HOM05D002569 ORTHO05D006728 1.2e-17 93.2 52 84.6
MD03G1024500 Malus domestica HOM05D002569 ORTHO05D006728 1.2e-17 93.2 52 84.6
Nn7g36161 Nelumbo nucifera HOM05D002569 ORTHO05D006728 1.2e-17 93.2 52 84.6
Atru.chr3.2604 Acer truncatum HOM05D002569 ORTHO05D006728 1.5e-17 92.8 52 84.6
Nitab4.5_0000492g0100 Nicotiana tabacum HOM05D002569 ORTHO05D006728 1.5e-17 92.8 51 86.3
THA.LOC104799090 Tarenaya hassleriana HOM05D002569 ORTHO05D006728 1.5e-17 92.8 52 84.6
CANSAT54G1339 Cannabis sativa HOM05D002569 ORTHO05D006728 2.0e-17 92.4 52 80.8
Ciclev10014959m.g Citrus clementina HOM05D002569 ORTHO05D006728 2.0e-17 92.4 54 79.6
Ciclev10030987m.g Citrus clementina HOM05D002569 ORTHO05D006728 2.0e-17 92.4 52 84.6
FAN16G0653 Fragaria x ananassa HOM05D002569 ORTHO05D006728 2.0e-17 92.4 49 85.7
Sp6g24770 Schrenkiella parvula HOM05D002569 ORTHO05D006728 2.0e-17 92.4 52 84.6
Lalb_Chr14g0372161 Lupinus albus HOM05D002569 ORTHO05D006728 3.4e-17 91.7 52 84.6
QL01p005206 Quercus lobata HOM05D002569 ORTHO05D006728 3.4e-17 91.7 51 84.3
Sed0019540 Sechium edule HOM05D002569 ORTHO05D006728 3.4e-17 91.7 52 82.7
Thecc.09G228700 Theobroma cacao HOM05D002569 ORTHO05D006728 3.4e-17 91.7 55 78.2
PSO339G1449 Papaver somniferum HOM05D002569 ORTHO05D006728 4.4e-17 91.3 52 82.7
PSO384G3146 Papaver somniferum HOM05D002569 ORTHO05D006728 4.4e-17 91.3 52 82.7
SalBow8G4903 Salvia bowleyana HOM05D002569 ORTHO05D006728 4.4e-17 91.3 52 80.8
Aqoxy7G03862 Aquilegia oxysepala HOM05D002569 ORTHO05D006728 5.8e-17 90.9 52 82.7
arahy.Tifrunner.gnm1.ann1.24VX5E Arachis hypogaea HOM05D002569 ORTHO05D006728 5.8e-17 90.9 52 84.6
arahy.Tifrunner.gnm1.ann1.89IDD9 Arachis hypogaea HOM05D002569 ORTHO05D006728 5.8e-17 90.9 52 84.6
Thhalv10012770m.g Eutrema salsugineum HOM05D002569 ORTHO05D006728 5.8e-17 90.9 52 82.7
CARHR193290 Cardamine hirsuta HOM05D002569 ORTHO05D006728 7.6e-17 90.5 52 82.7
FAN21G0039 Fragaria x ananassa HOM05D002569 ORTHO05D006728 1.3e-16 89.7 47 87.2
Os02g0196300 Oryza sativa ssp. japonica HOM05D002569 ORTHO05D006728 1.3e-16 89.7 52 78.8
Zm00001eb205950 Zea mays HOM05D002569 ORTHO05D006728 1.3e-16 89.7 52 78.8
Actinidia16317 Actinidia chinensis HOM05D002569 ORTHO05D006728 1.7e-16 89.4 52 80.8
FAN11G1818 Fragaria x ananassa HOM05D002569 ORTHO05D006728 1.7e-16 89.4 47 85.1
arahy.Tifrunner.gnm1.ann1.IW7M0D Arachis hypogaea HOM05D002569 ORTHO05D006728 2.2e-16 89.0 51 84.3
arahy.Tifrunner.gnm1.ann1.VAJP8X Arachis hypogaea HOM05D002569 ORTHO05D006728 2.2e-16 89.0 51 84.3
Hund07529 Selenicereus undatus HOM05D002569 ORTHO05D020107 2.2e-16 89.0 52 76.9
SGA_v2.0_scaffold247G44859 Striga asiatica HOM05D002569 ORTHO05D006728 2.2e-16 89.0 52 80.8
DCAR_018962 Daucus carota HOM05D002569 ORTHO05D006728 2.9e-16 88.6 52 76.9
Ah.06g193680 Amaranthus hybridus HOM05D002569 ORTHO05D006728 4.9e-16 87.8 52 78.8
EL10Ac4g10295 Beta vulgaris HOM05D002569 ORTHO05D006728 4.9e-16 87.8 52 78.8
Cfa009745 Carpinus fangiana HOM05D002569 ORTHO05D006728 4.9e-16 87.8 54 75.9
Haze_23104 Corylus avellana HOM05D002569 ORTHO05D006728 4.9e-16 87.8 52 80.8
Haze_23108 Corylus avellana HOM05D002569 ORTHO05D006728 4.9e-16 87.8 52 80.8
Sc09g0000580 Simmondsia chinensis HOM05D002569 ORTHO05D006728 4.9e-16 87.8 52 78.8
BcaC04g24226 Brassica carinata HOM05D002569 ORTHO05D020107 8.3e-16 87.0 52 78.8
A10p20090 Brassica napus HOM05D002569 ORTHO05D006728 8.3e-16 87.0 52 78.8
C09p56560 Brassica napus HOM05D002569 ORTHO05D006728 8.3e-16 87.0 52 78.8
BolC9t58521H Brassica oleracea HOM05D002569 ORTHO05D006728 8.3e-16 87.0 52 78.8
BraA10t44083Z Brassica rapa HOM05D002569 ORTHO05D006728 8.3e-16 87.0 52 78.8
HPP92_006144 Vanilla planifolia HOM05D002569 ORTHO05D006728 8.3e-16 87.0 46 80.4
Glyma.13G340700 Glycine max HOM05D002569 ORTHO05D006728 1.1e-15 86.7 52 78.8
Glyma.15G033700 Glycine max HOM05D002569 ORTHO05D006728 1.1e-15 86.7 52 78.8
Lalb_Chr22g0352351 Lupinus albus HOM05D002569 ORTHO05D020107 3.2e-15 85.1 52 78.8
Phvul.L010043 Phaseolus vulgaris HOM05D002569 ORTHO05D006728 3.2e-15 85.1 52 76.9
VMungo1080G1486 Vigna mungo HOM05D002569 ORTHO05D006728 3.2e-15 85.1 52 76.9
Duzib170G0706 Durio zibethinus HOM05D002569 ORTHO05D006728 2.1e-14 82.4 52 73.1
Cre09.g388097 Chlamydomonas reinhardtii HOM05D002569 ORTHO05D006728 2.7e-14 82.0 50 68.0
Nn2g15442 Nelumbo nucifera HOM05D002569 ORTHO05D020107 6.6e-13 77.4 44 81.8
HanXRQChr17g0534151 Helianthus annuus HOM05D002569 ORTHO05D006728 1.1e-12 76.6 52 71.2
PRCOL_00003853 Prasinoderma coloniale HOM05D002569 ORTHO05D006728 2.5e-12 75.5 50 66.0
ECA233G6009 Erigeron canadensis HOM05D002569 ORTHO05D006728 7.3e-12 73.9 42 83.3
Cpa.g.sc84.73 Carica papaya HOM05D002569 ORTHO05D006728 9.6e-12 73.6 42 83.3
Gohir.D08G023700 Gossypium hirsutum HOM05D002569 ORTHO05D006728 9.6e-12 73.6 51 66.7
Gorai.004G019000 Gossypium raimondii HOM05D002569 ORTHO05D006728 9.6e-12 73.6 51 66.7
SEGI_21098 Sequoiadendron giganteum HOM05D002569 ORTHO05D009088 6.2e-11 70.9 52 53.8
Gohir.A08G013300 Gossypium hirsutum HOM05D002569 ORTHO05D006728 1.5e-09 66.2 51 60.8
MBI11_g15177_MAGBIO Magnolia biondii HOM05D002569 ORTHO05D009088 2.7e-06 55.5 48 50.0
vmacro21166 Vaccinium macrocarpon HOM05D002569 ORTHO05D020107 2.7e-06 55.5 39 66.7
SGA_v2.0_scaffold268G46207 Striga asiatica HOM05D002569 ORTHO05D009088 4.6e-06 54.7 54 44.4
Aqoxy3G01726 Aquilegia oxysepala HOM05D002569 ORTHO05D006728 6.0e-06 54.3 45 57.8
AT3G44160 Arabidopsis thaliana HOM05D002569 ORTHO05D009088 6.0e-06 54.3 47 51.1
BcaB01g01195 Brassica carinata HOM05D002569 ORTHO05D009088 6.0e-06 54.3 47 53.2
Carub.0005s0988 Capsella rubella HOM05D002569 ORTHO05D009088 7.8e-06 53.9 47 51.1
CARHR152940 Cardamine hirsuta HOM05D002569 ORTHO05D009088 7.8e-06 53.9 47 51.1
Thhalv10010440m.g Eutrema salsugineum HOM05D002569 ORTHO05D009088 7.8e-06 53.9 47 51.1
Gorai.006G116800 Gossypium raimondii HOM05D002569 ORTHO05D009088 7.8e-06 53.9 47 51.1


User provided reference genes

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