Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0079 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 1.4e-201 706.1 364 100.0
TAR629G1471 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.2e-150 537.0 351 77.2
TAR629G2660 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.2e-150 537.0 351 77.2
GSVIVG01012214001 Vitis vinifera HOM05D001391 ORTHO05D005432 1.7e-149 533.1 364 75.0
Ciclev10031905m.g Citrus clementina HOM05D001391 ORTHO05D005432 9.5e-145 517.3 354 73.7
Sopen05g007170 Solanum pennellii HOM05D001391 ORTHO05D005432 1.6e-144 516.5 356 73.3
Zm00001eb393170 Zea mays HOM05D001391 ORTHO05D005432 1.6e-144 516.5 339 78.5
QL03p072323 Quercus lobata HOM05D001391 ORTHO05D005432 2.1e-144 516.2 335 75.8
CiPaw.06G092300 Carya illinoinensis HOM05D001391 ORTHO05D005432 2.8e-144 515.8 359 72.7
QL03p071791 Quercus lobata HOM05D001391 ORTHO05D005432 2.8e-144 515.8 335 76.1
Cc11_g12040 Coffea canephora HOM05D001391 ORTHO05D005432 6.1e-144 514.6 363 74.1
Aqoxy3G03632 Aquilegia oxysepala HOM05D001391 ORTHO05D005432 8.0e-144 514.2 334 76.9
Lj3C1030G23 Lonicera japonica HOM05D001391 ORTHO05D005432 8.0e-144 514.2 333 76.9
Manes.01G028100 Manihot esculenta HOM05D001391 ORTHO05D005432 8.0e-144 514.2 327 78.0
QL03p071836 Quercus lobata HOM05D001391 ORTHO05D005432 2.3e-143 512.7 335 75.5
Sabra10G0120500 Salix brachista HOM05D001391 ORTHO05D005432 2.3e-143 512.7 347 74.4
SGA_v2.0_scaffold16G07780 Striga asiatica HOM05D001391 ORTHO05D005432 3.1e-143 512.3 362 72.1
CSS0007431 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 5.2e-143 511.5 330 77.9
CSS0028231 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 5.2e-143 511.5 330 77.9
Potri.010G158700 Populus trichocarpa HOM05D001391 ORTHO05D005432 2.0e-142 509.6 346 73.7
Lj4g0006249 Lotus japonicus HOM05D001391 ORTHO05D005432 3.4e-142 508.8 332 75.9
MD16G1061600 Malus domestica HOM05D001391 ORTHO05D005432 3.4e-142 508.8 328 76.2
MELO3C011425.2 Cucumis melo HOM05D001391 ORTHO05D005432 4.4e-142 508.4 362 70.4
QL03p071994 Quercus lobata HOM05D001391 ORTHO05D005432 4.4e-142 508.4 335 75.2
QL03p072348 Quercus lobata HOM05D001391 ORTHO05D005432 7.5e-142 507.7 341 73.6
Ca_18800_v3 Cicer arietinum L. HOM05D001391 ORTHO05D005432 9.8e-142 507.3 352 72.4
Duzib248G0196 Durio zibethinus HOM05D001391 ORTHO05D005432 9.8e-142 507.3 334 75.4
ATR0064G010 Amborella trichopoda HOM05D001391 ORTHO05D005432 1.3e-141 506.9 302 81.8
PSO017G5650 Papaver somniferum HOM05D001391 ORTHO05D005432 1.7e-141 506.5 334 75.1
PSO478G1327 Papaver somniferum HOM05D001391 ORTHO05D005432 2.2e-141 506.1 334 75.1
FvH4_4g30104 Fragaria vesca HOM05D001391 ORTHO05D005432 3.7e-141 505.4 353 72.8
Glyma.20G025600 Glycine max HOM05D001391 ORTHO05D005432 3.7e-141 505.4 352 72.4
FAN07G1596 Fragaria x ananassa HOM05D001391 ORTHO05D005432 4.9e-141 505.0 323 77.4
PGR102G1705 Punica granatum HOM05D001391 ORTHO05D005432 4.9e-141 505.0 321 78.2
QL06p022506 Quercus lobata HOM05D001391 ORTHO05D005432 4.9e-141 505.0 327 76.1
Dinv34072 Davidia involucrata HOM05D001391 ORTHO05D005432 6.4e-141 504.6 332 77.4
FAN17G2247 Fragaria x ananassa HOM05D001391 ORTHO05D002605 6.4e-141 504.6 354 72.3
Sed0003297 Sechium edule HOM05D001391 ORTHO05D005432 6.4e-141 504.6 333 74.5
DCAR_007192 Daucus carota HOM05D001391 ORTHO05D005432 1.1e-140 503.8 362 70.7
RcHm_v2.0_Chr4g0438441 Rosa chinensis HOM05D001391 ORTHO05D005432 1.1e-140 503.8 319 78.4
Prupe.1G286500 Prunus persica HOM05D001391 ORTHO05D005432 1.4e-140 503.4 326 76.7
Atru.chr11.1633 Acer truncatum HOM05D001391 ORTHO05D005432 2.4e-140 502.7 333 75.1
Medtr4g083100 Medicago truncatula HOM05D001391 ORTHO05D005432 3.2e-140 502.3 334 75.1
QL03p072246 Quercus lobata HOM05D001391 ORTHO05D005432 4.1e-140 501.9 320 77.5
Psat7g134560 Pisum sativum HOM05D001391 ORTHO05D005432 5.4e-140 501.5 328 75.6
MD13G1063100 Malus domestica HOM05D001391 ORTHO05D005432 1.2e-139 500.4 351 72.1
TWI31G1273 Tripterygium wilfordii HOM05D001391 ORTHO05D005432 1.2e-139 500.4 346 73.4
HanXRQChr15g0477081 Helianthus annuus HOM05D001391 ORTHO05D005432 1.6e-139 500.0 334 72.5
arahy.Tifrunner.gnm1.ann1.52K398 Arachis hypogaea HOM05D001391 ORTHO05D005432 2.0e-139 499.6 333 74.5
Lalb_Chr05g0219941 Lupinus albus HOM05D001391 ORTHO05D005432 2.7e-139 499.2 334 74.3
arahy.Tifrunner.gnm1.ann1.G55KBL Arachis hypogaea HOM05D001391 ORTHO05D005432 4.6e-139 498.4 332 74.7
Eucgr.B03154 Eucalyptus grandis HOM05D001391 ORTHO05D005432 4.6e-139 498.4 325 74.8
Actinidia16169 Actinidia chinensis HOM05D001391 ORTHO05D005432 7.8e-139 497.7 316 77.8
THA.LOC104824058 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 1.0e-138 497.3 331 73.4
Sed0027135 Sechium edule HOM05D001391 ORTHO05D005432 1.3e-138 496.9 353 70.5
QL03p071709 Quercus lobata HOM05D001391 ORTHO05D005432 3.0e-138 495.7 330 73.0
TPR.G34031 Trifolium pratense HOM05D001391 ORTHO05D005432 3.0e-138 495.7 354 70.6
ECA246G4329 Erigeron canadensis HOM05D001391 ORTHO05D005432 6.6e-138 494.6 337 71.2
FAN22G1389 Fragaria x ananassa HOM05D001391 ORTHO05D005432 6.6e-138 494.6 353 71.4
CAN.G616.39 Capsicum annuum HOM05D001391 ORTHO05D005432 8.6e-138 494.2 334 74.0
Oeu048144.1 Olea europaea HOM05D001391 ORTHO05D005432 2.5e-137 492.7 312 77.9
A09p24460 Brassica napus HOM05D001391 ORTHO05D005432 3.3e-137 492.3 350 70.6
RcHm_v2.0_Chr4g0438461 Rosa chinensis HOM05D001391 ORTHO05D005432 3.3e-137 492.3 328 75.0
Thecc.02G331500 Theobroma cacao HOM05D001391 ORTHO05D005432 3.3e-137 492.3 302 80.1
BraA09t38039Z Brassica rapa HOM05D001391 ORTHO05D005432 4.3e-137 491.9 350 70.6
VMungo0251G0716 Vigna mungo HOM05D001391 ORTHO05D005432 4.3e-137 491.9 358 70.1
BcaB07g30667 Brassica carinata HOM05D001391 ORTHO05D005432 5.6e-137 491.5 330 73.0
THA.LOC104805193 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 5.6e-137 491.5 357 69.7
PGSC0003DMG400028375 Solanum tuberosum HOM05D001391 ORTHO05D005432 1.2e-136 490.3 320 76.2
Aa31LG2G7090 Aethionema arabicum HOM05D001391 ORTHO05D005432 4.7e-136 488.4 330 72.7
BcaC04g21485 Brassica carinata HOM05D001391 ORTHO05D005432 4.7e-136 488.4 330 72.7
C09p31260 Brassica napus HOM05D001391 ORTHO05D005432 4.7e-136 488.4 330 72.7
BolC9t55982H Brassica oleracea HOM05D001391 ORTHO05D005432 4.7e-136 488.4 330 72.7
CANSAT64G0915 Cannabis sativa HOM05D001391 ORTHO05D005432 4.7e-136 488.4 337 70.9
Thhalv10004477m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 4.7e-136 488.4 330 72.7
Ah.02g126880 Amaranthus hybridus HOM05D001391 ORTHO05D005432 6.2e-136 488.0 355 69.3
HanXRQChr12g0375271 Helianthus annuus HOM05D001391 ORTHO05D005432 6.2e-136 488.0 340 69.7
Zm00001eb020150 Zea mays HOM05D001391 ORTHO05D005432 6.2e-136 488.0 337 75.1
AL5G13280 Arabidopsis lyrata HOM05D001391 ORTHO05D005432 8.0e-136 487.6 353 69.4
Sp2g14420 Schrenkiella parvula HOM05D001391 ORTHO05D005432 1.1e-135 487.3 330 72.1
HPP92_020445 Vanilla planifolia HOM05D001391 ORTHO05D005432 3.1e-135 485.7 347 72.0
CARHR145860 Cardamine hirsuta HOM05D001391 ORTHO05D005432 4.0e-135 485.3 330 72.1
BcaC03g17224 Brassica carinata HOM05D001391 ORTHO05D005432 8.9e-135 484.2 346 69.7
C02p51560 Brassica napus HOM05D001391 ORTHO05D005432 8.9e-135 484.2 346 69.7
BolC2t11243H Brassica oleracea HOM05D001391 ORTHO05D005432 8.9e-135 484.2 346 69.7
COL.COLO4_27891 Corchorus olitorius HOM05D001391 ORTHO05D005432 8.9e-135 484.2 332 72.3
AUR62003104 Chenopodium quinoa HOM05D001391 ORTHO05D005432 2.0e-134 483.0 316 73.7
EL10Ac6g14993 Beta vulgaris HOM05D001391 ORTHO05D005432 2.6e-134 482.6 319 74.0
Carub.0005s0265 Capsella rubella HOM05D001391 ORTHO05D005432 5.8e-134 481.5 330 71.5
AT2G03510 Arabidopsis thaliana HOM05D001391 ORTHO05D005432 7.5e-134 481.1 330 71.2
unitig_22.g6493 Utricularia gibba HOM05D001391 ORTHO05D005432 1.9e-132 476.5 356 67.4
TAR622G0883 Trochodendron aralioides HOM05D001391 ORTHO05D005432 3.2e-132 475.7 375 67.7
SMO364G0146 Selaginella moellendorffii HOM05D001391 ORTHO05D005432 9.2e-132 474.2 299 77.6
Haze_11913 Corylus avellana HOM05D001391 ORTHO05D005432 2.1e-131 473.0 292 80.1
Lsat_1_v5_gn_3_53800 Lactuca sativa HOM05D001391 ORTHO05D005432 3.0e-130 469.2 340 67.4
PSO478G2440 Papaver somniferum HOM05D001391 ORTHO05D005432 1.9e-129 466.5 314 73.9
Pp3c1_8060 Physcomitrium patens HOM05D001391 ORTHO05D005432 2.5e-129 466.1 315 73.0
Gorai.013G093700 Gossypium raimondii HOM05D001391 ORTHO05D005432 3.3e-129 465.7 334 71.0
DCAR_030039 Daucus carota HOM05D001391 ORTHO05D005432 7.3e-129 464.5 326 70.9
Nitab4.5_0001487g0070 Nicotiana tabacum HOM05D001391 ORTHO05D005432 7.3e-129 464.5 341 70.1
Gohir.D13G081800 Gossypium hirsutum HOM05D001391 ORTHO05D005432 1.4e-127 460.3 334 69.5
Mapoly0041s0056 Marchantia polymorpha HOM05D001391 ORTHO05D005432 3.1e-127 459.1 324 70.1
Pp3c2_37740 Physcomitrium patens HOM05D001391 ORTHO05D005432 1.2e-126 457.2 320 70.9
Nitab4.5_0000231g0390 Nicotiana tabacum HOM05D001391 ORTHO05D005432 1.5e-126 456.8 333 70.6
CsaV3_6G032550 Cucumis sativus L. HOM05D001391 ORTHO05D005432 3.5e-123 445.7 353 66.0
QL03p071961 Quercus lobata HOM05D001391 ORTHO05D005432 3.5e-123 445.7 320 70.6
Hund05837 Selenicereus undatus HOM05D001391 ORTHO05D005432 3.5e-123 445.7 304 71.7
AagrBONN_evm.TU.Sc2ySwM_228.3454 Anthoceros agrestis HOM05D001391 ORTHO05D005432 1.0e-122 444.1 313 69.6
QL03p071737 Quercus lobata HOM05D001391 ORTHO05D005432 1.0e-122 444.1 338 66.9
vmacro01316 Vaccinium macrocarpon HOM05D001391 ORTHO05D005432 1.3e-122 443.7 362 65.5
Migut.L01194 Erythranthe guttata HOM05D001391 ORTHO05D005432 1.1e-121 440.7 301 72.8
Sabra08G0071900 Salix brachista HOM05D001391 ORTHO05D005432 5.6e-121 438.3 361 66.5
CBR_g22084 Chara braunii HOM05D001391 ORTHO05D005432 1.8e-119 433.3 329 66.6
Phvul.002G102100 Phaseolus vulgaris HOM05D001391 ORTHO05D005432 8.9e-119 431.0 305 71.8
Lj6C779T14 Lonicera japonica HOM05D001391 ORTHO05D005432 1.7e-117 426.8 396 58.1
Dinv16729 Davidia involucrata HOM05D001391 ORTHO05D005432 2.2e-117 426.4 279 76.7
Glyma.07G225600 Glycine max HOM05D001391 ORTHO05D005432 3.2e-116 422.5 268 78.4
Nn4g23419 Nelumbo nucifera HOM05D001391 ORTHO05D005432 2.8e-112 409.5 359 62.1
ClCG08G010360 Citrullus lanatus HOM05D001391 ORTHO05D005432 3.6e-112 409.1 323 67.2
CsaV3_6G033630 Cucumis sativus L. HOM05D001391 ORTHO05D005432 8.1e-112 407.9 358 61.7
CDE02G0606 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 2.6e-110 402.9 239 84.5
Cpa.g.sc1.121 Carica papaya HOM05D001391 ORTHO05D005432 5.8e-110 401.7 257 77.8
MBI16_g24179_MAGBIO Magnolia biondii HOM05D001391 ORTHO05D005432 8.4e-109 397.9 355 60.8
Sc11g0002420 Simmondsia chinensis HOM05D001391 ORTHO05D005432 3.9e-106 389.0 278 70.9
Thhalv10022792m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 5.1e-106 388.7 349 57.0
Thhalv10022979m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 5.1e-106 388.7 349 57.0
Rhsim12G0074900 Rhododendron simsii HOM05D001391 ORTHO05D005432 1.8e-103 380.2 304 64.8
Solyc05g012340.4 Solanum lycopersicum HOM05D001391 ORTHO05D005432 4.0e-103 379.0 239 79.1
Peaxi162Scf00175g00121 Petunia axillaris HOM05D001391 ORTHO05D005432 1.5e-102 377.1 246 74.4
Eucgr.B03155 Eucalyptus grandis HOM05D001391 ORTHO05D005432 1.1e-100 370.9 243 75.3
AUR62007921 Chenopodium quinoa HOM05D001391 ORTHO05D005432 5.4e-100 368.6 314 59.6
Thecc.02G331800 Theobroma cacao HOM05D001391 ORTHO05D005432 2.5e-89 333.2 229 70.7
Nn3g17437 Nelumbo nucifera HOM05D001391 ORTHO05D005432 5.3e-87 325.5 347 54.5
Gohir.A13G082200 Gossypium hirsutum HOM05D001391 ORTHO05D005432 1.2e-83 314.3 210 72.9
CSS0036366 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.3e-82 310.8 233 69.5
Eucgr.B03159 Eucalyptus grandis HOM05D001391 ORTHO05D005432 1.7e-72 277.3 197 72.6
Gohir.D12G164650 Gossypium hirsutum HOM05D001391 ORTHO05D005432 6.5e-69 265.4 197 72.6
Hund25181 Selenicereus undatus HOM05D001391 ORTHO05D005432 5.7e-65 252.3 174 71.8
HanXRQChr08g0223901 Helianthus annuus HOM05D001391 ORTHO05D005432 2.9e-61 240.0 183 66.7
Gorai.008G177300 Gossypium raimondii HOM05D001391 ORTHO05D005432 2.8e-56 223.4 167 71.9
SEGI_41081 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 1.7e-40 171.0 129 67.4
SEGI_06703 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 6.3e-40 169.1 131 67.2
SEGI_37700 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.3e-37 160.6 120 66.7
CSS0025210 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 2.5e-36 157.1 127 63.8
Hma1.2p1_1826F.1_g304410 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 2.3e-29 134.0 125 58.4
Gorai.008G177400 Gossypium raimondii HOM05D001391 ORTHO05D005432 2.9e-29 133.7 83 73.5
QL03p071882 Quercus lobata HOM05D001391 ORTHO05D005432 5.0e-29 132.9 117 65.0
Hma1.2p1_3404F.1_g335810 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 1.5e-28 131.3 118 63.6
Mapoly0004s0019 Marchantia polymorpha HOM05D001391 ORTHO05D005432 1.6e-27 127.9 278 30.2
Hund25180 Selenicereus undatus HOM05D001391 ORTHO05D005432 4.7e-27 126.3 86 70.9
QL01p050908 Quercus lobata HOM05D001391 ORTHO05D005432 3.4e-25 120.2 119 53.8
Gohir.A13G082366 Gossypium hirsutum HOM05D001391 ORTHO05D005432 4.6e-22 109.8 88 65.9
SEGI_28419 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 1.9e-20 104.4 86 59.3
SEGI_10839 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 1.6e-19 101.3 75 66.7
Os03g0421400 Oryza sativa ssp. japonica HOM05D001391 ORTHO05D005432 2.1e-19 100.9 87 62.1
BcaB07g30295 Brassica carinata HOM05D001391 ORTHO05D005432 5.2e-18 96.3 79 69.6
SEGI_38290 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 7.5e-17 92.4 53 73.6
MD16G1164500 Malus domestica HOM05D001391 ORTHO05D005432 5.4e-15 86.3 52 71.2
QL01p050911 Quercus lobata HOM05D001391 ORTHO05D005432 5.4e-15 86.3 73 67.1


User provided reference genes

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