Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0078 Ceratophyllum demersum HOM05D005693 ORTHO05D006826 2.9e-67 258.5 132 100.0
CDE05G1621 Ceratophyllum demersum HOM05D005693 ORTHO05D006826 2.1e-57 225.7 131 87.0
Aqoxy1G00128 Aquilegia oxysepala HOM05D005693 ORTHO05D006826 7.9e-25 117.5 127 53.5
Dinv24066 Davidia involucrata HOM05D005693 ORTHO05D006826 1.5e-23 113.2 132 53.0
TAR623G1103 Trochodendron aralioides HOM05D005693 ORTHO05D006826 5.7e-23 111.3 134 52.2
Ah.13g075810 Amaranthus hybridus HOM05D005693 ORTHO05D006826 1.4e-21 106.7 120 50.8
GSVIVG01033491001 Vitis vinifera HOM05D005693 ORTHO05D006826 1.4e-21 106.7 126 52.4
Duzib128G0858 Durio zibethinus HOM05D005693 ORTHO05D006826 4.1e-21 105.1 122 54.1
COL.COLO4_33976 Corchorus olitorius HOM05D005693 ORTHO05D006826 5.3e-21 104.8 119 52.1
Haze_20000 Corylus avellana HOM05D005693 ORTHO05D006826 5.3e-21 104.8 124 52.4
RcHm_v2.0_Chr3g0479521 Rosa chinensis HOM05D005693 ORTHO05D006826 1.5e-20 103.2 117 53.0
CiPaw.09G046600 Carya illinoinensis HOM05D005693 ORTHO05D006826 4.5e-20 101.7 119 50.4
Haze_20002 Corylus avellana HOM05D005693 ORTHO05D006826 4.5e-20 101.7 124 51.6
MD12G1056600 Malus domestica HOM05D005693 ORTHO05D006826 5.9e-20 101.3 120 51.7
MD14G1055100 Malus domestica HOM05D005693 ORTHO05D006826 1.0e-19 100.5 120 53.3
Prupe.7G077600 Prunus persica HOM05D005693 ORTHO05D006826 1.0e-19 100.5 119 52.9
Thecc.05G172100 Theobroma cacao HOM05D005693 ORTHO05D006826 1.3e-19 100.1 122 53.3
Sed0000696 Sechium edule HOM05D005693 ORTHO05D006826 2.9e-19 99.0 124 49.2
EL10Ac3g06910 Beta vulgaris HOM05D005693 ORTHO05D006826 3.8e-19 98.6 117 50.4
CSS0003318 Camellia sinensis var. sinensis HOM05D005693 ORTHO05D006826 3.8e-19 98.6 136 43.4
CSS0050183 Camellia sinensis var. sinensis HOM05D005693 ORTHO05D006826 3.8e-19 98.6 136 43.4
PSO339G5051 Papaver somniferum HOM05D005693 ORTHO05D006826 6.5e-19 97.8 123 46.3
Potri.016G045200 Populus trichocarpa HOM05D005693 ORTHO05D006826 6.5e-19 97.8 119 50.4
MELO3C009620.2 Cucumis melo HOM05D005693 ORTHO05D006826 8.5e-19 97.4 127 48.0
CsaV3_3G038750 Cucumis sativus L. HOM05D005693 ORTHO05D006826 8.5e-19 97.4 127 48.0
Gohir.A01G191200 Gossypium hirsutum HOM05D005693 ORTHO05D006826 1.4e-18 96.7 117 51.3
Manes.09G035800 Manihot esculenta HOM05D005693 ORTHO05D006826 1.4e-18 96.7 132 45.5
ClCG10G017580 Citrullus lanatus HOM05D005693 ORTHO05D006826 1.9e-18 96.3 127 47.2
Hund24794 Selenicereus undatus HOM05D005693 ORTHO05D006826 1.9e-18 96.3 136 45.6
AUR62012025 Chenopodium quinoa HOM05D005693 ORTHO05D006826 2.5e-18 95.9 120 47.5
Hma1.2p1_0648F.1_g195113 Hydrangea macrophylla HOM05D005693 ORTHO05D006826 4.2e-18 95.1 121 47.9
Medtr7g093290 Medicago truncatula HOM05D005693 ORTHO05D006826 4.2e-18 95.1 123 48.0
Nitab4.5_0001137g0070 Nicotiana tabacum HOM05D005693 ORTHO05D006826 4.2e-18 95.1 121 49.6
AUR62015362 Chenopodium quinoa HOM05D005693 ORTHO05D006826 5.5e-18 94.7 120 48.3
Gohir.D01G178700 Gossypium hirsutum HOM05D005693 ORTHO05D006826 5.5e-18 94.7 120 49.2
vmacro07901 Vaccinium macrocarpon HOM05D005693 ORTHO05D006826 5.5e-18 94.7 128 48.4
TPR.G18210 Trifolium pratense HOM05D005693 ORTHO05D006826 7.2e-18 94.4 123 48.8
Cpa.g.sc85.51 Carica papaya HOM05D005693 ORTHO05D006826 1.2e-17 93.6 118 48.3
TWI53G1089 Tripterygium wilfordii HOM05D005693 ORTHO05D006826 1.2e-17 93.6 126 47.6
FvH4_6g22170 Fragaria vesca HOM05D005693 ORTHO05D006826 1.6e-17 93.2 116 48.3
Lalb_Chr18g0047901 Lupinus albus HOM05D005693 ORTHO05D006826 1.6e-17 93.2 121 48.8
Nitab4.5_0004458g0020 Nicotiana tabacum HOM05D005693 ORTHO05D006826 1.6e-17 93.2 118 49.2
Gorai.002G224200 Gossypium raimondii HOM05D005693 ORTHO05D006826 2.7e-17 92.4 117 49.6
PGR004G1521 Punica granatum HOM05D005693 ORTHO05D006826 2.7e-17 92.4 118 48.3
Sopen03g015940 Solanum pennellii HOM05D005693 ORTHO05D006826 2.7e-17 92.4 117 47.9
Sabra16G0049200 Salix brachista HOM05D005693 ORTHO05D006826 8.0e-17 90.9 118 47.5
PGSC0003DMG400014975 Solanum tuberosum HOM05D005693 ORTHO05D006826 8.0e-17 90.9 117 48.7
Actinidia32396 Actinidia chinensis HOM05D005693 ORTHO05D006826 1.0e-16 90.5 114 49.1
Psat3g068360 Pisum sativum HOM05D005693 ORTHO05D006826 1.4e-16 90.1 120 49.2
Solyc03g063320.3 Solanum lycopersicum HOM05D005693 ORTHO05D006826 1.4e-16 90.1 117 47.0
CARHR086660 Cardamine hirsuta HOM05D005693 ORTHO05D006826 3.0e-16 89.0 126 47.6
DCAR_013542 Daucus carota HOM05D005693 ORTHO05D006826 3.0e-16 89.0 135 45.2
FAN27G0418 Fragaria x ananassa HOM05D005693 ORTHO05D006826 3.0e-16 89.0 116 47.4
Sc19g0006040 Simmondsia chinensis HOM05D005693 ORTHO05D006826 3.0e-16 89.0 132 44.7
Lju124A25T35 Lonicera japonica HOM05D005693 ORTHO05D006826 6.7e-16 87.8 137 46.7
Cc06_g15820 Coffea canephora HOM05D005693 ORTHO05D006826 8.8e-16 87.4 117 43.6
Lj1g0019099 Lotus japonicus HOM05D005693 ORTHO05D006826 8.8e-16 87.4 125 48.0
Lsat_1_v5_gn_8_75420 Lactuca sativa HOM05D005693 ORTHO05D006826 1.5e-15 86.7 131 45.8
ATR0807G195 Amborella trichopoda HOM05D005693 ORTHO05D006826 2.0e-15 86.3 131 45.0
CANSAT64G1199 Cannabis sativa HOM05D005693 ORTHO05D006826 2.6e-15 85.9 121 47.1
Duzib093G0150 Durio zibethinus HOM05D005693 ORTHO05D006826 2.6e-15 85.9 119 49.6
arahy.Tifrunner.gnm1.ann1.C1QR5S Arachis hypogaea HOM05D005693 ORTHO05D006826 3.3e-15 85.5 117 48.7
arahy.Tifrunner.gnm1.ann1.F8DN54 Arachis hypogaea HOM05D005693 ORTHO05D006826 3.3e-15 85.5 117 48.7
FAN25G3535 Fragaria x ananassa HOM05D011417 ORTHO05D006826 3.3e-15 85.5 127 41.7
CAN.G87.1 Capsicum annuum HOM05D005693 ORTHO05D006826 5.7e-15 84.7 115 44.3
THA.LOC104799293 Tarenaya hassleriana HOM05D005693 ORTHO05D006826 5.7e-15 84.7 130 43.8
AL3G23730 Arabidopsis lyrata HOM05D005693 ORTHO05D006826 9.7e-15 84.0 126 46.8
QL93p0118_0004 Quercus lobata HOM05D005693 ORTHO05D006826 1.3e-14 83.6 113 48.7
QL07p023907 Quercus lobata HOM05D005693 ORTHO05D006826 2.2e-14 82.8 113 48.7
AT3G12100 Arabidopsis thaliana HOM05D005693 ORTHO05D006826 4.8e-14 81.6 126 44.4
Nn7g36005 Nelumbo nucifera HOM05D005693 ORTHO05D006826 6.3e-14 81.3 125 44.8
Migut.J01840 Erythranthe guttata HOM05D005693 ORTHO05D006826 1.1e-13 80.5 120 46.7
Thhalv10020889m.g Eutrema salsugineum HOM05D005693 ORTHO05D006826 1.1e-13 80.5 126 44.4
Atru.chr8.1120 Acer truncatum HOM05D005693 ORTHO05D006826 4.1e-13 78.6 119 45.4
Carub.0003s1144 Capsella rubella HOM05D005693 ORTHO05D006826 9.1e-13 77.4 126 42.9
Aa31LG3G6280 Aethionema arabicum HOM05D005693 ORTHO05D006826 1.2e-12 77.0 126 45.2
C05p55720 Brassica napus HOM05D005693 ORTHO05D006826 1.6e-12 76.6 126 40.5
Atru.chr5.2645 Acer truncatum HOM05D005693 ORTHO05D006826 2.6e-12 75.9 118 44.1
Atru.chr9.1297 Acer truncatum HOM05D005693 ORTHO05D006826 2.6e-12 75.9 118 44.1
BcaC05g29290 Brassica carinata HOM05D005693 ORTHO05D006826 2.6e-12 75.9 125 40.8
BolC5t34239H Brassica oleracea HOM05D005693 ORTHO05D006826 2.6e-12 75.9 125 40.8
HanXRQChr05g0132951 Helianthus annuus HOM05D005693 ORTHO05D006826 2.6e-12 75.9 149 40.3
A05p37250 Brassica napus HOM05D005693 ORTHO05D006826 4.5e-12 75.1 125 40.0
Sp3g10330 Schrenkiella parvula HOM05D005693 ORTHO05D006826 5.9e-12 74.7 119 45.4
Ca_08527_v3 Cicer arietinum L. HOM05D005693 ORTHO05D006826 7.7e-12 74.3 119 44.5
Eucgr.A02454 Eucalyptus grandis HOM05D005693 ORTHO05D006826 7.7e-12 74.3 129 45.0
Ciclev10011987m.g Citrus clementina HOM05D005693 ORTHO05D006826 1.0e-11 73.9 118 44.1
BcaB06g25545 Brassica carinata HOM05D005693 ORTHO05D006826 1.3e-11 73.6 128 41.4
VMungo1383G3018 Vigna mungo HOM05D005693 ORTHO05D006826 1.3e-11 73.6 118 44.1
MSTRG.6485 Avicennia marina HOM05D005693 ORTHO05D006826 2.2e-11 72.8 116 44.0
BraA05t22521Z Brassica rapa HOM05D005693 ORTHO05D006826 1.5e-10 70.1 126 38.9
SalBow6G0162 Salvia bowleyana HOM05D005693 ORTHO05D006826 1.5e-10 70.1 117 41.0
Phvul.001G142750 Phaseolus vulgaris HOM05D005693 ORTHO05D006826 2.5e-10 69.3 118 42.4
Oeu063873.1 Olea europaea HOM05D005693 ORTHO05D006826 5.5e-10 68.2 116 40.5
Glyma.03G145200 Glycine max HOM05D005693 ORTHO05D006826 7.2e-10 67.8 121 38.8
Peaxi162Scf00258g00724 Petunia axillaris HOM05D005693 ORTHO05D006826 1.2e-09 67.0 117 42.7
Glyma.19G148200 Glycine max HOM05D005693 ORTHO05D006826 4.7e-09 65.1 121 40.5
SEGI_14579 Sequoiadendron giganteum HOM05D005693 ORTHO05D006826 4.0e-08 62.0 149 34.2
Manes.11G017601 Manihot esculenta HOM05D005693 ORTHO05D006826 5.2e-08 61.6 57 56.1
Manes.17G026624 Manihot esculenta HOM05D005693 ORTHO05D006826 5.2e-08 61.6 57 56.1
PSO384G0754 Papaver somniferum HOM05D005693 ORTHO05D006826 5.7e-07 58.2 48 54.2
Zm00001eb190540 Zea mays HOM05D005693 ORTHO05D006826 2.8e-06 55.8 114 35.1
HPP92_009025 Vanilla planifolia HOM05D005693 ORTHO05D006826 3.7e-06 55.5 122 35.2
HPP92_009079 Vanilla planifolia HOM05D005693 ORTHO05D006826 3.7e-06 55.5 122 35.2


User provided reference genes

Program Settings