Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 2.3e-93 345.5 168 100.0
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 3.8e-88 328.2 163 97.5
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 1.5e-68 263.1 162 74.7
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 7.4e-68 260.8 162 73.5
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 9.6e-68 260.4 163 72.4
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 3.7e-67 258.5 167 71.3
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.8e-66 256.1 159 72.3
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 3.1e-66 255.4 165 72.1
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 3.1e-66 255.4 168 72.6
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 5.3e-66 254.6 163 73.0
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 5.3e-66 254.6 164 73.2
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 6.9e-66 254.2 168 69.6
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.5e-65 253.1 159 71.1
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 2.0e-65 252.7 161 71.4
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 2.6e-65 252.3 165 70.9
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 4.5e-65 251.5 163 70.6
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 5.9e-65 251.1 163 69.9
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 7.6e-65 250.8 165 69.7
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 7.6e-65 250.8 166 66.3
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 1.3e-64 250.0 157 72.0
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 1.3e-64 250.0 165 69.7
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 1.3e-64 250.0 163 69.3
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 1.7e-64 249.6 167 70.1
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 1.7e-64 249.6 163 70.6
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 2.2e-64 249.2 164 71.3
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 2.9e-64 248.8 165 70.3
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 2.9e-64 248.8 166 66.9
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 3.8e-64 248.4 165 68.5
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 3.8e-64 248.4 159 67.3
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 5.0e-64 248.1 166 68.7
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 6.5e-64 247.7 166 68.1
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 8.4e-64 247.3 167 69.5
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 8.4e-64 247.3 167 67.1
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 1.4e-63 246.5 164 70.1
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 1.4e-63 246.5 166 67.5
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 1.4e-63 246.5 167 69.5
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 1.9e-63 246.1 155 72.3
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 1.9e-63 246.1 168 66.7
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 1.9e-63 246.1 170 68.8
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 1.9e-63 246.1 168 66.1
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 2.5e-63 245.7 167 68.9
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 2.5e-63 245.7 163 66.9
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 2.5e-63 245.7 163 70.6
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 3.2e-63 245.4 164 68.9
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 3.2e-63 245.4 162 68.5
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 3.2e-63 245.4 163 69.9
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 4.2e-63 245.0 170 67.6
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 5.5e-63 244.6 158 71.5
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 9.3e-63 243.8 163 66.3
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 2.1e-62 242.7 163 69.3
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 2.1e-62 242.7 163 69.3
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 2.7e-62 242.3 165 69.1
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 2.7e-62 242.3 163 65.6
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 2.7e-62 242.3 160 68.1
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 2.7e-62 242.3 160 68.1
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 2.7e-62 242.3 161 67.1
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 3.5e-62 241.9 167 68.9
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 3.5e-62 241.9 161 68.9
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 3.5e-62 241.9 163 68.7
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 6.1e-62 241.1 163 69.9
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 6.1e-62 241.1 163 69.9
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 7.9e-62 240.7 162 66.7
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 1.0e-61 240.4 163 67.5
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 1.3e-61 240.0 163 69.3
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 5.1e-61 238.0 162 66.0
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 6.7e-61 237.7 162 66.0
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 6.7e-61 237.7 162 65.4
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 8.7e-61 237.3 163 67.5
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 1.5e-60 236.5 157 70.1
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 4.3e-60 235.0 156 64.7
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 4.3e-60 235.0 158 69.0
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 4.3e-60 235.0 163 66.9
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 7.4e-60 234.2 163 64.4
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 7.4e-60 234.2 155 71.6
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 1.6e-59 233.0 163 65.6
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 2.8e-59 232.3 156 67.3
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 3.7e-59 231.9 161 65.2
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 4.8e-59 231.5 161 64.6
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 1.1e-58 230.3 174 62.6
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 1.1e-58 230.3 165 65.5
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 3.1e-58 228.8 175 61.7
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 6.9e-58 227.6 164 64.6
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 1.2e-57 226.9 167 62.3
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 4.5e-57 224.9 160 62.5
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 7.7e-57 224.2 163 64.4
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 1.0e-56 223.8 153 64.7
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 1.3e-56 223.4 174 62.6
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 3.8e-56 221.9 166 62.0
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 1.1e-55 220.3 162 59.9
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.1e-55 220.3 196 56.6
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 5.5e-55 218.0 141 68.1
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 7.9e-54 214.2 143 69.9
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.4e-53 213.4 163 62.6
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 3.3e-52 208.8 166 60.8
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 4.3e-52 208.4 163 62.6
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 6.5e-48 194.5 266 41.4
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 1.6e-46 189.9 164 49.4
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 2.7e-46 189.1 156 59.6
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 3.0e-45 185.7 120 69.2
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 8.8e-45 184.1 161 50.9
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 1.0e-40 170.6 143 51.0
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 5.0e-40 168.3 134 62.7
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 9.7e-36 154.1 162 41.4
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 3.8e-32 142.1 158 42.4
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 1.0e-29 134.0 103 59.2
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 3.8e-24 115.5 66 77.3
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 9.4e-23 110.9 90 62.2
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 8.3e-19 97.8 140 36.4
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 8.3e-19 97.8 75 61.3
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 9.2e-18 94.4 167 34.1
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 1.3e-16 90.5 163 31.9
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-16 90.5 73 58.9
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 7.5e-12 74.7 106 42.5
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 1.1e-07 60.8 95 40.0
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 1.1e-07 60.8 94 38.3
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 1.1e-07 60.8 51 51.0


User provided reference genes

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