Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3746 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 8.9e-183 643.7 370 100.0
CDE07G0842 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 6.4e-165 584.3 352 95.2
Nn8g40460 Nelumbo nucifera HOM05D004327 ORTHO05D005032 1.8e-154 549.7 368 84.2
TAR343G0001 Trochodendron aralioides HOM05D004327 ORTHO05D005032 1.4e-151 540.0 368 79.9
Dinv42719 Davidia involucrata HOM05D004327 ORTHO05D005032 1.3e-149 533.5 366 77.9
GSVIVG01029211001 Vitis vinifera HOM05D004327 ORTHO05D005032 1.3e-149 533.5 367 80.7
CSS0007595 Camellia sinensis var. sinensis HOM05D004327 ORTHO05D005032 1.7e-149 533.1 366 80.6
Dinv43382 Davidia involucrata HOM05D004327 ORTHO05D005032 3.8e-149 531.9 367 77.7
Thecc.09G176900 Theobroma cacao HOM05D004327 ORTHO05D005032 4.9e-149 531.6 367 79.8
Cpa.g.sc233.7 Carica papaya HOM05D004327 ORTHO05D005032 8.4e-149 530.8 367 77.9
Duzib150G0132 Durio zibethinus HOM05D004327 ORTHO05D005032 3.2e-148 528.9 367 81.7
VMungo1215G1888 Vigna mungo HOM05D004327 ORTHO05D005032 1.6e-147 526.6 367 76.8
ATR0580G352 Amborella trichopoda HOM05D004327 ORTHO05D005032 2.1e-147 526.2 366 81.4
Potri.018G092000 Populus trichocarpa HOM05D004327 ORTHO05D005032 2.7e-147 525.8 367 79.8
Gohir.D08G093800 Gossypium hirsutum HOM05D004327 ORTHO05D005032 3.5e-147 525.4 367 80.4
PSO170G3199 Papaver somniferum HOM05D004327 ORTHO05D005032 3.5e-147 525.4 371 80.1
Manes.14G154300 Manihot esculenta HOM05D004327 ORTHO05D005032 4.6e-147 525.0 367 77.4
PSO063G6085 Papaver somniferum HOM05D004327 ORTHO05D005032 4.6e-147 525.0 371 78.4
Gohir.A08G084200 Gossypium hirsutum HOM05D004327 ORTHO05D005032 1.0e-146 523.9 367 80.1
Hma1.2p1_1025F.1_g249340 Hydrangea macrophylla HOM05D004327 ORTHO05D005032 1.3e-146 523.5 366 78.1
Gorai.004G099500 Gossypium raimondii HOM05D004327 ORTHO05D005032 8.7e-146 520.8 378 77.8
Ciclev10008675m.g Citrus clementina HOM05D004327 ORTHO05D005032 1.1e-145 520.4 367 80.1
Glyma.17G062900 Glycine max HOM05D004327 ORTHO05D005032 1.9e-145 519.6 367 76.0
Phvul.003G145300 Phaseolus vulgaris HOM05D004327 ORTHO05D005032 2.5e-145 519.2 367 75.5
Glyma.13G096600 Glycine max HOM05D004327 ORTHO05D005032 7.4e-145 517.7 366 76.0
QL02p097831 Quercus lobata HOM05D004327 ORTHO05D005032 7.4e-145 517.7 367 78.5
CiPaw.07G192500 Carya illinoinensis HOM05D004327 ORTHO05D005032 9.6e-145 517.3 368 75.5
CANSAT11G1121 Cannabis sativa HOM05D004327 ORTHO05D005032 2.8e-144 515.8 368 73.9
Duzib168G0099 Durio zibethinus HOM05D004327 ORTHO05D005032 6.2e-144 514.6 369 78.3
arahy.Tifrunner.gnm1.ann1.UF0NDT Arachis hypogaea HOM05D004327 ORTHO05D005032 1.8e-143 513.1 368 76.1
COL.COLO4_37716 Corchorus olitorius HOM05D004327 ORTHO05D005032 4.0e-143 511.9 367 78.2
Atru.chr7.613 Acer truncatum HOM05D004327 ORTHO05D005032 5.3e-143 511.5 369 75.6
Medtr4g127970 Medicago truncatula HOM05D004327 ORTHO05D005032 5.3e-143 511.5 366 74.9
Prupe.1G085300 Prunus persica HOM05D004327 ORTHO05D005032 5.3e-143 511.5 368 74.2
arahy.Tifrunner.gnm1.ann1.IHC8NS Arachis hypogaea HOM05D004327 ORTHO05D005032 1.2e-142 510.4 368 75.8
Lalb_Chr07g0180501 Lupinus albus HOM05D004327 ORTHO05D005032 2.0e-142 509.6 363 75.5
CsaV3_2G008420 Cucumis sativus L. HOM05D004327 ORTHO05D005032 5.8e-142 508.1 367 73.8
Lj4g0017259 Lotus japonicus HOM05D004327 ORTHO05D005032 5.8e-142 508.1 364 75.3
MSTRG.26218 Avicennia marina HOM05D004327 ORTHO05D005032 7.6e-142 507.7 362 75.4
MBI14_g17374_MAGBIO Magnolia biondii HOM05D004327 ORTHO05D005032 7.6e-142 507.7 368 78.8
MD13G1253000 Malus domestica HOM05D004327 ORTHO05D005032 1.3e-141 506.9 368 73.4
ClCG11G012140 Citrullus lanatus HOM05D004327 ORTHO05D005032 1.7e-141 506.5 368 73.9
Rhsim03G0264600 Rhododendron simsii HOM05D004327 ORTHO05D005032 1.7e-141 506.5 366 80.1
Ca_21229_v3 Cicer arietinum L. HOM05D004327 ORTHO05D005032 2.2e-141 506.1 355 80.0
MD16G1257500 Malus domestica HOM05D004327 ORTHO05D005032 2.2e-141 506.1 368 73.1
TPR.G5449 Trifolium pratense HOM05D004327 ORTHO05D005032 2.2e-141 506.1 367 77.4
Cc06_g13210 Coffea canephora HOM05D004327 ORTHO05D005032 6.5e-141 504.6 365 77.8
Eucgr.C00153 Eucalyptus grandis HOM05D004327 ORTHO05D005032 3.2e-140 502.3 367 74.4
Peaxi162Scf00231g00726 Petunia axillaris HOM05D004327 ORTHO05D005032 2.1e-139 499.6 369 79.1
Solyc07g019530.3 Solanum lycopersicum HOM05D004327 ORTHO05D005032 2.1e-139 499.6 368 79.1
Sopen07g008040 Solanum pennellii HOM05D004327 ORTHO05D005032 2.1e-139 499.6 368 79.1
Aqoxy7G03046 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 3.5e-139 498.8 350 82.6
Sed0007507 Sechium edule HOM05D004327 ORTHO05D005032 3.9e-138 495.4 368 71.7
RcHm_v2.0_Chr4g0402371 Rosa chinensis HOM05D004327 ORTHO05D005032 6.7e-138 494.6 368 73.9
MSTRG.6222 Avicennia marina HOM05D004327 ORTHO05D005032 1.1e-137 493.8 363 74.9
HanXRQChr11g0322421 Helianthus annuus HOM05D004327 ORTHO05D005032 1.1e-137 493.8 367 77.7
THA.LOC104811786 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 1.1e-137 493.8 366 76.8
FAN22G1646 Fragaria x ananassa HOM05D004327 ORTHO05D005032 2.5e-137 492.7 369 76.4
vmacro06012 Vaccinium macrocarpon HOM05D004327 ORTHO05D005032 1.3e-136 490.3 354 73.7
FvH4_4g08170 Fragaria vesca HOM05D004327 ORTHO05D005032 1.6e-136 490.0 369 76.2
DCAR_017971 Daucus carota HOM05D004327 ORTHO05D005032 2.2e-136 489.6 347 75.2
Sabra18G0079100 Salix brachista HOM05D004327 ORTHO05D005032 2.2e-136 489.6 367 75.7
HPP92_019412 Vanilla planifolia HOM05D004327 ORTHO05D005032 3.7e-136 488.8 354 79.1
Migut.K00240 Erythranthe guttata HOM05D004327 ORTHO05D005032 2.4e-135 486.1 362 71.8
Carub.0008s1793 Capsella rubella HOM05D004327 ORTHO05D005032 4.1e-135 485.3 367 73.6
Thhalv10013843m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 4.1e-135 485.3 365 75.1
CARHR271210 Cardamine hirsuta HOM05D004327 ORTHO05D005032 5.3e-135 485.0 367 74.4
SGA_v2.0_scaffold66G22446 Striga asiatica HOM05D004327 ORTHO05D005032 2.0e-134 483.0 362 77.3
AL8G33390 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 3.4e-134 482.3 367 71.1
SalBow6G1961 Salvia bowleyana HOM05D004327 ORTHO05D005032 4.5e-134 481.9 362 76.5
ECA240G0157 Erigeron canadensis HOM05D004327 ORTHO05D005032 7.7e-134 481.1 345 76.2
Zm00001eb178290 Zea mays HOM05D004327 ORTHO05D005032 7.7e-134 481.1 343 82.8
Sp6g19130 Schrenkiella parvula HOM05D004327 ORTHO05D005032 1.0e-133 480.7 367 74.4
Sc14g0001280 Simmondsia chinensis HOM05D004327 ORTHO05D005032 1.3e-133 480.3 351 76.6
CAN.G210.1 Capsicum annuum HOM05D004327 ORTHO05D005032 5.0e-133 478.4 354 78.0
Actinidia17317 Actinidia chinensis HOM05D004327 ORTHO05D005032 8.5e-133 477.6 365 77.5
BolC3t13942H Brassica oleracea HOM05D004327 ORTHO05D005032 1.1e-132 477.2 363 74.1
AT5G57410 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 1.4e-132 476.9 369 71.0
BraA03t10592Z Brassica rapa HOM05D004327 ORTHO05D005032 1.9e-132 476.5 363 74.1
Psat4g169000 Pisum sativum HOM05D004327 ORTHO05D005032 1.9e-132 476.5 350 73.1
THA.LOC104813521 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 7.2e-132 474.6 401 70.8
BcaB01g04457 Brassica carinata HOM05D004327 ORTHO05D005032 4.6e-131 471.9 343 76.4
Migut.J01485 Erythranthe guttata HOM05D004327 ORTHO05D005032 4.6e-131 471.9 347 72.3
Os08g0242900 Oryza sativa ssp. japonica HOM05D004327 ORTHO05D005032 6.1e-131 471.5 343 81.3
BcaC01g06496 Brassica carinata HOM05D004327 ORTHO05D005032 7.9e-131 471.1 367 73.6
A03p12840 Brassica napus HOM05D004327 ORTHO05D005032 1.8e-130 469.9 342 76.3
C03p15000 Brassica napus HOM05D004327 ORTHO05D005032 3.9e-130 468.8 342 76.0
unitig_0.g2679 Utricularia gibba HOM05D004327 ORTHO05D005032 2.0e-129 466.5 369 76.2
Lsat_1_v5_gn_7_54620 Lactuca sativa HOM05D004327 ORTHO05D005032 5.7e-129 464.9 331 81.0
PGR142G4100 Punica granatum HOM05D004327 ORTHO05D005032 7.4e-129 464.5 367 70.0
ECA236G3505 Erigeron canadensis HOM05D004327 ORTHO05D005032 2.2e-128 463.0 359 72.7
THA.LOC104803493 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 1.4e-127 460.3 366 74.6
Aa31LG3G13300 Aethionema arabicum HOM05D004327 ORTHO05D005032 1.8e-127 459.9 407 65.8
Hund09030 Selenicereus undatus HOM05D004327 ORTHO05D005032 5.3e-127 458.4 365 73.4
Carub.0003s3311 Capsella rubella HOM05D004327 ORTHO05D005032 1.3e-125 453.8 368 72.0
CARHR109440 Cardamine hirsuta HOM05D004327 ORTHO05D005032 3.8e-125 452.2 369 68.3
EL10Ac8g18287 Beta vulgaris HOM05D004327 ORTHO05D005032 1.1e-124 450.7 368 71.5
AUR62033220 Chenopodium quinoa HOM05D004327 ORTHO05D005032 7.2e-124 448.0 366 74.3
AL3G53050 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 4.7e-123 445.3 367 66.5
SHI02909 Sapria himalayana HOM05D004327 ORTHO05D005032 3.9e-122 442.2 364 70.3
Sp3g32340 Schrenkiella parvula HOM05D004327 ORTHO05D005032 3.9e-122 442.2 368 69.8
BcaB07g31641 Brassica carinata HOM05D004327 ORTHO05D005032 6.7e-122 441.4 367 71.7
Aa31LG8G15970 Aethionema arabicum HOM05D004327 ORTHO05D005032 2.6e-121 439.5 368 72.0
Dinv41244 Davidia involucrata HOM05D004327 ORTHO05D005032 1.3e-120 437.2 299 81.3
BolC9t54328H Brassica oleracea HOM05D004327 ORTHO05D005032 1.4e-119 433.7 346 69.4
BcaC04g22882 Brassica carinata HOM05D004327 ORTHO05D005032 2.4e-119 433.0 367 71.4
C09p14270 Brassica napus HOM05D004327 ORTHO05D005032 2.4e-119 433.0 367 71.4
A09p12090 Brassica napus HOM05D004327 ORTHO05D005032 9.1e-119 431.0 374 68.4
Lalb_Chr13g0300201 Lupinus albus HOM05D004327 ORTHO05D005032 1.5e-118 430.3 353 68.0
BraA09t36853Z Brassica rapa HOM05D004327 ORTHO05D005032 2.0e-118 429.9 346 72.0
Thhalv10022742m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 4.5e-118 428.7 368 66.6
AagrBONN_evm.TU.Sc2ySwM_117.785 Anthoceros agrestis HOM05D004327 ORTHO05D005032 5.5e-116 421.8 366 63.4
Sed0007415 Sechium edule HOM05D004327 ORTHO05D005032 2.7e-115 419.5 369 63.1
AUR62021302 Chenopodium quinoa HOM05D004327 ORTHO05D005032 6.1e-115 418.3 347 73.8
CiPaw.08G036000 Carya illinoinensis HOM05D004327 ORTHO05D005032 1.5e-113 413.7 360 63.9
SMO352G0043 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 4.4e-113 412.1 353 63.5
Pp3c12_10100 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.4e-111 406.4 365 60.3
TAR636G3612 Trochodendron aralioides HOM05D000809 ORTHO05D001196 2.4e-111 406.4 292 81.8
Nitab4.5_0004572g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 2.7e-107 392.9 379 65.2
Pp3c5_23860 Physcomitrium patens HOM05D004327 ORTHO05D005032 6.1e-107 391.7 361 59.0
FAN17G0468 Fragaria x ananassa HOM05D004327 ORTHO05D005032 1.4e-106 390.6 330 69.1
Nitab4.5_0005945g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 2.2e-104 383.3 368 65.8
MELO3C004022.2 Cucumis melo HOM05D004327 ORTHO05D005032 3.5e-102 375.9 294 71.1
Pp3c3_22200 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.2e-101 373.2 358 57.3
Actinidia38633 Actinidia chinensis HOM05D004327 ORTHO05D005032 1.5e-100 370.5 286 70.6
Lj9A24G29 Lonicera japonica HOM05D004327 ORTHO05D005032 1.5e-97 360.5 267 73.0
SMO137G0257 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 2.0e-97 360.1 329 59.0
Pp3c10_16450 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.7e-96 357.1 316 60.4
Duzib170G0255 Durio zibethinus HOM05D004327 ORTHO05D005032 3.1e-95 352.8 221 85.5
Actinidia27011 Actinidia chinensis HOM05D004327 ORTHO05D005032 1.2e-94 350.9 307 71.0
Mapoly0023s0050 Marchantia polymorpha HOM05D004327 ORTHO05D005032 3.8e-93 345.9 361 54.6
Pp3c16_10790 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.6e-91 340.5 367 52.3
CBR_g34541 Chara braunii HOM05D004327 ORTHO05D005032 2.8e-91 339.7 346 54.0
CBR_g4121 Chara braunii HOM05D004327 ORTHO05D005032 1.5e-89 334.0 374 56.4
AT2G18876 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 3.4e-89 332.8 249 73.9
Haze_22092 Corylus avellana HOM05D004327 ORTHO05D005032 7.5e-89 331.6 267 67.4
Actinidia02748 Actinidia chinensis HOM05D004327 ORTHO05D005032 2.8e-83 313.2 224 77.2
BcaB01g04461 Brassica carinata HOM05D004327 ORTHO05D005032 8.3e-80 301.6 309 59.2
BcaC01g06490 Brassica carinata HOM05D004327 ORTHO05D005032 3.4e-65 253.1 172 77.9
Aqoxy4G01695 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 9.6e-52 208.4 125 88.0
Oeu042171.1 Olea europaea HOM05D004327 ORTHO05D005032 2.6e-41 173.7 121 75.2
Haze_22093 Corylus avellana HOM05D004327 ORTHO05D005032 1.6e-38 164.5 133 69.9
FAN17G0800 Fragaria x ananassa HOM05D004327 ORTHO05D005032 5.6e-36 156.0 121 70.2
BcaC01g06489 Brassica carinata HOM05D004327 ORTHO05D005032 6.2e-35 152.5 142 65.5
SEGI_01506 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 6.0e-30 136.0 105 70.5
Lj9A25T20 Lonicera japonica HOM05D004327 ORTHO05D005032 6.7e-29 132.5 97 70.1
HanXRQChr08g0229701 Helianthus annuus HOM05D000502 ORTHO05D005032 4.8e-27 126.3 70 84.3
HanXRQChr09g0245491 Helianthus annuus HOM05D000502 ORTHO05D005032 4.8e-27 126.3 70 84.3
HanXRQChr13g0404041 Helianthus annuus HOM05D000502 ORTHO05D005032 6.9e-26 122.5 70 82.9
Aqoxy7G03035 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 1.3e-19 101.7 130 49.2
Pp3c26_7180 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.0e-16 92.0 97 46.4
CiPaw.01G111100 Carya illinoinensis HOM05D002292 ORTHO05D005032 2.9e-16 90.5 58 86.2
COL.COLO4_28287 Corchorus olitorius HOM05D004327 ORTHO05D005032 1.9e-15 87.8 57 84.2
SEGI_38031 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 4.2e-15 86.7 55 81.8
BraA02t05921Z Brassica rapa HOM05D004327 ORTHO05D005032 2.1e-14 84.3 81 58.0
BcaB05g22345 Brassica carinata HOM05D004327 ORTHO05D005032 4.6e-14 83.2 92 51.1
Pp3c25_9090 Physcomitrium patens HOM05D004327 ORTHO05D005032 3.9e-13 80.1 97 51.5
Oeu003512.1 Olea europaea HOM05D004327 ORTHO05D005032 2.8e-11 73.9 42 85.7
BolC9t54329H Brassica oleracea HOM05D004327 ORTHO05D005032 3.1e-10 70.5 59 69.5
Glyma.09G140000 Glycine max HOM05D004327 ORTHO05D005032 4.1e-10 70.1 74 48.6
C02p14250 Brassica napus HOM05D004327 ORTHO05D032179 5.9e-09 66.2 130 38.5
PRCOL_00002192 Prasinoderma coloniale HOM05D004327 ORTHO05D005032 3.2e-07 60.5 266 25.2
CiPaw.16G058000 Carya illinoinensis HOM05D002292 ORTHO05D003256 9.4e-07 58.9 38 84.2
BcaC03g14154 Brassica carinata HOM05D004327 ORTHO05D032179 1.6e-06 58.2 78 41.0


User provided reference genes

Program Settings