Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 3.4e-74 281.6 143 100.0
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 4.0e-54 214.9 140 72.1
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 1.5e-53 213.0 141 73.8
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 1.5e-53 213.0 139 72.7
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 1.5e-53 213.0 140 72.9
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 2.6e-53 212.2 141 70.9
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 3.3e-53 211.8 139 71.9
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 3.3e-53 211.8 141 71.6
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 7.5e-53 210.7 140 70.7
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 7.5e-53 210.7 140 72.9
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 9.7e-53 210.3 141 71.6
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 9.7e-53 210.3 141 70.2
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 9.7e-53 210.3 141 70.2
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 1.7e-52 209.5 141 69.5
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 3.7e-52 208.4 140 70.0
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 3.7e-52 208.4 140 69.3
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 6.3e-52 207.6 141 69.5
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 8.2e-52 207.2 141 68.8
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 8.2e-52 207.2 142 73.2
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 1.1e-51 206.8 140 70.7
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 1.1e-51 206.8 140 69.3
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 1.4e-51 206.5 140 69.3
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 1.4e-51 206.5 141 70.2
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 1.8e-51 206.1 141 71.6
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 5.3e-51 204.5 140 68.6
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 7.0e-51 204.1 140 68.6
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 7.0e-51 204.1 138 68.8
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 7.0e-51 204.1 140 69.3
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 7.0e-51 204.1 140 69.3
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 9.1e-51 203.8 144 68.1
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 9.1e-51 203.8 140 68.6
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 9.1e-51 203.8 141 68.8
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 9.1e-51 203.8 140 69.3
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 1.2e-50 203.4 140 67.9
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 1.2e-50 203.4 140 70.0
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 1.6e-50 203.0 140 69.3
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 1.6e-50 203.0 140 67.9
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 1.6e-50 203.0 140 68.6
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 1.6e-50 203.0 140 69.3
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 3.5e-50 201.8 140 67.1
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 3.5e-50 201.8 141 67.4
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 3.5e-50 201.8 140 67.9
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 4.5e-50 201.4 140 67.9
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 5.9e-50 201.1 141 68.1
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 5.9e-50 201.1 140 69.3
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 1.0e-49 200.3 140 67.9
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 2.2e-49 199.1 150 66.0
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 3.8e-49 198.4 141 67.4
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 3.8e-49 198.4 141 67.4
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 3.8e-49 198.4 140 68.6
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 8.5e-49 197.2 140 67.9
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 8.5e-49 197.2 140 67.1
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 8.5e-49 197.2 141 69.5
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 1.1e-48 196.8 144 65.3
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 1.5e-48 196.4 141 69.5
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 1.9e-48 196.1 164 60.4
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 2.5e-48 195.7 141 66.0
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 2.5e-48 195.7 141 66.0
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 5.5e-48 194.5 141 66.0
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 7.2e-48 194.1 141 67.4
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 7.2e-48 194.1 144 67.4
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 7.2e-48 194.1 141 64.5
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 7.2e-48 194.1 144 66.0
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 1.2e-47 193.4 144 65.3
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 1.6e-47 193.0 143 67.1
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 1.6e-47 193.0 139 66.9
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 2.7e-47 192.2 148 63.5
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 4.7e-47 191.4 144 64.6
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 6.1e-47 191.0 144 63.9
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 8.0e-47 190.7 129 72.9
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 1.0e-46 190.3 141 63.8
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 1.8e-46 189.5 139 65.5
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 3.0e-46 188.7 143 66.4
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 5.2e-46 188.0 141 63.8
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 1.2e-45 186.8 146 63.7
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 1.2e-45 186.8 142 65.5
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 1.5e-45 186.4 144 64.6
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 1.5e-45 186.4 144 61.8
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 1.5e-45 186.4 144 61.8
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 3.4e-45 185.3 139 66.2
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 5.7e-45 184.5 141 63.1
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 7.5e-45 184.1 140 62.1
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 1.4e-43 179.9 137 62.8
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 4.2e-40 168.3 141 62.4
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 2.1e-39 166.0 139 56.1
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 1.5e-37 159.8 141 51.8
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 2.4e-35 152.5 141 54.6
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 4.4e-29 131.7 79 81.0
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 9.8e-29 130.6 141 49.6
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 3.0e-25 119.0 79 75.9
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 3.4e-21 105.5 69 73.9
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 3.4e-21 105.5 69 73.9
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 1.1e-16 90.5 141 39.0
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 1.1e-16 90.5 59 71.2
MCO14G094 Micromonas commoda HOM05D007406 ORTHO05D009434 9.5e-16 87.4 136 38.2
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 5.8e-13 78.2 68 57.4
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 7.5e-13 77.8 52 73.1
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 7.5e-13 77.8 52 73.1
PRCOL_00000641 Prasinoderma coloniale HOM05D007406 ORTHO05D009434 1.3e-12 77.0 89 50.6
Os03g0728600 Oryza sativa ssp. japonica HOM05D007406 ORTHO05D009434 3.7e-12 75.5 73 42.5
Cre10.g466400 Chlamydomonas reinhardtii HOM05D007406 ORTHO05D009434 3.3e-08 62.4 124 35.5


User provided reference genes

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