Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3622 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 7.6e-192 673.7 350 100.0
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 1.4e-97 360.5 341 58.4
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 5.3e-92 342.0 345 54.8
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 1.7e-90 337.0 325 56.3
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 2.9e-90 336.3 341 54.0
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 8.4e-90 334.7 345 53.0
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 8.1e-85 318.2 340 50.9
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 1.4e-84 317.4 340 51.8
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 1.5e-83 313.9 340 50.0
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 1.5e-83 313.9 353 48.2
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 9.9e-83 311.2 345 50.7
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 1.3e-82 310.8 345 48.1
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 1.7e-82 310.5 336 51.5
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 1.7e-82 310.5 336 51.5
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 4.9e-82 308.9 345 49.9
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 4.9e-82 308.9 344 50.0
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 4.2e-81 305.8 346 51.4
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 7.1e-81 305.1 350 49.4
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 2.1e-80 303.5 345 47.5
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 1.8e-79 300.4 340 49.4
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 2.3e-79 300.1 345 49.0
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 3.9e-79 299.3 345 49.3
Peaxi162Scf00848g00012 Petunia axillaris HOM05D004671 ORTHO05D005638 5.1e-79 298.9 339 49.3
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 2.8e-77 293.1 344 46.5
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 2.8e-77 293.1 341 47.8
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 3.7e-77 292.7 371 46.6
ClCG05G008100 Citrullus lanatus HOM05D004671 ORTHO05D005638 2.4e-76 290.0 345 48.1
Solyc06g036000.4 Solanum lycopersicum HOM05D004671 ORTHO05D005638 3.1e-76 289.7 340 47.9
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 5.3e-76 288.9 341 46.6
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 6.9e-76 288.5 350 46.9
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 9.0e-76 288.1 337 51.0
Sopen06g011780 Solanum pennellii HOM05D004671 ORTHO05D005638 1.5e-75 287.3 336 48.2
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 2.0e-75 287.0 340 47.9
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 3.4e-75 286.2 340 47.9
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 3.4e-75 286.2 336 50.6
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 7.6e-75 285.0 350 48.0
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 1.3e-74 284.3 344 47.7
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 1.3e-74 284.3 344 47.7
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 2.2e-74 283.5 348 46.6
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 2.9e-74 283.1 343 46.4
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 2.9e-74 283.1 346 47.1
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 4.9e-74 282.3 347 47.6
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 1.1e-73 281.2 337 45.7
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 1.4e-73 280.8 337 46.0
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 3.2e-73 279.6 351 45.3
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 7.1e-73 278.5 294 53.1
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 2.1e-72 276.9 352 42.9
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 3.5e-72 276.2 347 45.8
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 6.0e-72 275.4 353 42.5
Sed0027520 Sechium edule HOM05D004671 ORTHO05D005638 2.3e-71 273.5 343 45.5
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 3.9e-71 272.7 343 45.8
HPP92_020192 Vanilla planifolia HOM05D004671 ORTHO05D005638 6.7e-71 271.9 341 45.2
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 8.7e-71 271.6 347 43.8
QL09p013914 Quercus lobata HOM05D004671 ORTHO05D005638 8.7e-71 271.6 282 54.6
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 1.1e-70 271.2 334 44.9
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 1.9e-70 270.4 338 44.7
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 1.9e-70 270.4 357 45.1
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 4.3e-70 269.2 344 44.2
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 1.3e-69 267.7 347 45.2
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 1.6e-69 267.3 347 42.7
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 2.1e-69 266.9 349 43.3
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 3.7e-69 266.2 347 45.0
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 3.7e-69 266.2 348 44.8
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.4e-68 264.2 348 44.5
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 1.4e-68 264.2 348 42.5
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 3.1e-68 263.1 350 44.3
TWI14G0685 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 3.1e-68 263.1 341 46.6
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 9.0e-68 261.5 345 44.1
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 1.2e-67 261.2 346 42.8
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.5e-67 260.8 361 43.8
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.5e-67 260.8 354 44.4
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 2.0e-67 260.4 347 42.9
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 2.0e-67 260.4 345 46.1
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 5.8e-67 258.8 317 47.0
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 7.6e-67 258.5 347 44.4
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 1.3e-66 257.7 337 43.9
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 1.7e-66 257.3 337 45.7
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 2.2e-66 256.9 340 45.0
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 6.5e-66 255.4 349 41.0
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 4.2e-65 252.7 347 42.4
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 7.1e-65 251.9 343 42.6
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 2.7e-64 250.0 342 41.2
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 7.9e-64 248.4 338 42.6
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 1.0e-63 248.1 349 39.8
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 3.9e-63 246.1 345 42.0
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 5.1e-63 245.7 338 43.2
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 6.7e-63 245.4 347 42.9
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 8.7e-63 245.0 349 39.3
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 7.4e-62 241.9 349 39.3
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 1.3e-61 241.1 345 42.6
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 2.2e-61 240.4 351 39.6
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 2.2e-61 240.4 348 41.4
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 2.8e-61 240.0 357 40.6
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 2.8e-61 240.0 371 41.0
Lj5g0019412 Lotus japonicus HOM05D004671 ORTHO05D005638 4.8e-61 239.2 346 41.9
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 8.2e-61 238.4 349 39.8
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 1.8e-60 237.3 349 39.8
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 1.8e-60 237.3 349 39.8
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 4.1e-60 236.1 349 39.5
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 1.2e-59 234.6 251 51.0
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 1.7e-58 230.7 349 38.7
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 3.8e-58 229.6 349 38.4
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 6.5e-58 228.8 300 44.7
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 1.4e-57 227.6 351 38.2
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 1.9e-57 227.3 349 39.0
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 1.9e-57 227.3 338 41.4
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 3.2e-57 226.5 355 39.2
MD07G1271300 Malus domestica HOM05D004671 ORTHO05D005638 4.2e-57 226.1 271 46.9
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea HOM05D004671 ORTHO05D005638 7.2e-57 225.3 346 38.7
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 4.6e-56 222.6 339 41.0
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 7.9e-56 221.9 351 39.6
AUR62021173 Chenopodium quinoa HOM05D004671 ORTHO05D005638 6.7e-55 218.8 345 40.0
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 2.5e-54 216.9 364 38.7
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis HOM05D004671 ORTHO05D005638 5.7e-54 215.7 360 38.1
Oeu004097.1 Olea europaea HOM05D004671 ORTHO05D005638 5.7e-54 215.7 216 53.2
Ah.13g068640 Amaranthus hybridus HOM05D004671 ORTHO05D005638 1.1e-49 201.4 343 35.0
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 3.2e-49 199.9 351 35.6
Migut.K01220 Erythranthe guttata HOM05D004671 ORTHO05D005638 4.2e-49 199.5 262 45.0
arahy.Tifrunner.gnm1.ann1.4LKL39 Arachis hypogaea HOM05D004671 ORTHO05D005638 2.7e-48 196.8 296 38.5
Zm00001eb160040 Zea mays HOM05D004671 ORTHO05D005638 1.4e-47 194.5 343 36.2
Sed0007536 Sechium edule HOM05D004671 ORTHO05D005638 6.7e-47 192.2 257 44.7
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 1.7e-45 187.6 346 38.2
Ah.13g076510 Amaranthus hybridus HOM05D004671 ORTHO05D007692 3.7e-45 186.4 302 37.4
CSS0035516 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 4.1e-44 183.0 222 47.7
Os01g0679000 Oryza sativa ssp. japonica HOM05D004671 ORTHO05D005638 7.2e-41 172.2 338 34.0
Sc13g0008680 Simmondsia chinensis HOM05D004671 ORTHO05D005638 7.4e-38 162.2 281 39.5
BolC8t50021H Brassica oleracea HOM05D004671 ORTHO05D005638 2.0e-30 137.5 153 41.8
C08p23970 Brassica napus HOM05D004671 ORTHO05D005638 3.4e-30 136.7 153 42.5
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 9.7e-30 135.2 300 35.0
BcaC07g39376 Brassica carinata HOM05D004671 ORTHO05D005638 4.1e-28 129.8 146 41.8
BcaB01g00761 Brassica carinata HOM05D004671 ORTHO05D005638 5.3e-28 129.4 212 34.9
CBR_g5701 Chara braunii HOM05D004671 ORTHO05D005638 1.6e-27 127.9 199 35.2
HanXRQChr06g0163701 Helianthus annuus HOM05D001754 ORTHO05D005638 1.6e-27 127.9 302 32.1
SMO276G0042 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 7.2e-25 119.0 254 35.4
Cre16.g673900 Chlamydomonas reinhardtii HOM05D004671 ORTHO05D005638 4.0e-23 113.2 297 30.3
Oeu002719.1 Olea europaea HOM05D004671 ORTHO05D005638 8.3e-21 105.5 177 40.7
MCO01G383 Micromonas commoda HOM05D004671 ORTHO05D005638 4.2e-17 93.2 350 25.7
AL5G14400 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 1.6e-11 74.7 251 27.9
CBR_g26425 Chara braunii HOM05D004671 ORTHO05D005638 1.3e-10 71.6 96 38.5


User provided reference genes

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