Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3547 Ceratophyllum demersum HOM05D007155 ORTHO05D003034 3.1e-67 260.0 418 100.0
MD10G1226600 Malus domestica HOM05D007155 ORTHO05D003034 2.2e-12 77.8 70 48.6
Oeu046920.2 Olea europaea HOM05D007155 ORTHO05D003034 6.4e-12 76.3 67 47.8
DCAR_001266 Daucus carota HOM05D007155 ORTHO05D003034 1.4e-11 75.1 81 43.2
QL10p022098 Quercus lobata HOM05D007155 ORTHO05D003034 1.4e-11 75.1 67 47.8
RcHm_v2.0_Chr5g0021261 Rosa chinensis HOM05D007155 ORTHO05D003034 1.9e-11 74.7 67 47.8
Dinv26303 Davidia involucrata HOM05D007155 ORTHO05D003034 2.4e-11 74.3 67 46.3
Eucgr.D00014 Eucalyptus grandis HOM05D007155 ORTHO05D003034 3.2e-11 73.9 79 44.3
Solyc02g081860.3 Solanum lycopersicum HOM05D007155 ORTHO05D003034 3.2e-11 73.9 81 45.7
Sopen02g026480 Solanum pennellii HOM05D007155 ORTHO05D003034 5.4e-11 73.2 80 46.2
GSVIVG01012156001 Vitis vinifera HOM05D007155 ORTHO05D003034 7.1e-11 72.8 67 47.8
Manes.09G079638 Manihot esculenta HOM05D007155 ORTHO05D003034 9.3e-11 72.4 80 43.8
PGSC0003DMG400007329 Solanum tuberosum HOM05D007155 ORTHO05D003034 9.3e-11 72.4 69 49.3
Lj2P342T43 Lonicera japonica HOM05D007155 ORTHO05D003034 1.2e-10 72.0 67 47.8
SalBow7G4478 Salvia bowleyana HOM05D007155 ORTHO05D003034 1.2e-10 72.0 63 44.4
CAN.G809.50 Capsicum annuum HOM05D007155 ORTHO05D003034 1.6e-10 71.6 72 45.8
Cc09_g05030 Coffea canephora HOM05D007155 ORTHO05D003034 1.6e-10 71.6 68 47.1
MBI02_g21862_MAGBIO Magnolia biondii HOM05D007155 ORTHO05D003034 1.6e-10 71.6 63 49.2
CSS0001449 Camellia sinensis var. sinensis HOM05D007155 ORTHO05D003034 2.7e-10 70.9 62 50.0
CSS0034942 Camellia sinensis var. sinensis HOM05D007155 ORTHO05D003034 2.7e-10 70.9 62 50.0
Cfa001139 Carpinus fangiana HOM05D007155 ORTHO05D003034 3.5e-10 70.5 67 44.8
CiPaw.09G138700 Carya illinoinensis HOM05D007155 ORTHO05D003034 3.5e-10 70.5 67 46.3
Ciclev10014519m.g Citrus clementina HOM05D007155 ORTHO05D003034 3.5e-10 70.5 67 43.3
Nitab4.5_0000844g0300 Nicotiana tabacum HOM05D007155 ORTHO05D003034 3.5e-10 70.5 64 51.6
Potri.001G075900 Populus trichocarpa HOM05D007155 ORTHO05D003034 3.5e-10 70.5 67 44.8
Actinidia34693 Actinidia chinensis HOM05D007155 ORTHO05D003034 4.6e-10 70.1 68 44.1
Rhsim10G0011200 Rhododendron simsii HOM05D007155 ORTHO05D003034 4.6e-10 70.1 67 44.8
Thecc.02G002900 Theobroma cacao HOM05D007155 ORTHO05D003034 4.6e-10 70.1 67 43.3
Manes.13G075956 Manihot esculenta HOM05D007155 ORTHO05D003034 6.0e-10 69.7 80 42.5
Nitab4.5_0010610g0010 Nicotiana tabacum HOM05D007155 ORTHO05D003034 6.0e-10 69.7 81 43.2
PSO210G6432 Papaver somniferum HOM05D007155 ORTHO05D003034 6.0e-10 69.7 66 43.9
PSO832G3824 Papaver somniferum HOM05D007155 ORTHO05D003034 6.0e-10 69.7 67 43.3
FvH4_3g13070 Fragaria vesca HOM05D007155 ORTHO05D003034 7.8e-10 69.3 67 44.8
Migut.L00267 Erythranthe guttata HOM05D007155 ORTHO05D003034 1.0e-09 68.9 68 42.6
FAN11G2573 Fragaria x ananassa HOM05D007155 ORTHO05D003034 1.3e-09 68.6 67 44.8
Peaxi162Scf00036g00084 Petunia axillaris HOM05D007155 ORTHO05D003034 1.3e-09 68.6 72 44.4
Nn1g07043 Nelumbo nucifera HOM05D007155 ORTHO05D003034 1.7e-09 68.2 66 45.5
Potri.003G154800 Populus trichocarpa HOM05D007155 ORTHO05D003034 1.7e-09 68.2 67 43.3
COL.COLO4_25043 Corchorus olitorius HOM05D007155 ORTHO05D003034 2.3e-09 67.8 40 75.0
Haze_05252 Corylus avellana HOM05D007155 ORTHO05D003034 3.0e-09 67.4 67 43.3
Migut.L00974 Erythranthe guttata HOM05D007155 ORTHO05D003034 3.0e-09 67.4 64 43.8
Sabra03G0112000 Salix brachista HOM05D007155 ORTHO05D003034 3.0e-09 67.4 67 41.8
vmacro11017 Vaccinium macrocarpon HOM05D007155 ORTHO05D003034 3.0e-09 67.4 67 41.8
Sc17g0004280 Simmondsia chinensis HOM05D007155 ORTHO05D003034 3.9e-09 67.0 67 41.8
TAR624G1337 Trochodendron aralioides HOM05D007155 ORTHO05D003034 5.1e-09 66.6 68 45.6
Gorai.009G258000 Gossypium raimondii HOM05D007155 ORTHO05D003034 6.6e-09 66.2 66 39.4
Gohir.A05G245700 Gossypium hirsutum HOM05D007155 ORTHO05D003034 8.7e-09 65.9 66 39.4
SHI28075 Sapria himalayana HOM05D007155 ORTHO05D003034 8.7e-09 65.9 66 39.4
Duzib132G0118 Durio zibethinus HOM05D007155 ORTHO05D003034 1.5e-08 65.1 66 40.9
HanXRQChr01g0005921 Helianthus annuus HOM05D007155 ORTHO05D003034 1.5e-08 65.1 79 34.2
PGR142G0445 Punica granatum HOM05D007155 ORTHO05D003034 1.5e-08 65.1 64 46.9
Gohir.D05G247200 Gossypium hirsutum HOM05D007155 ORTHO05D003034 1.9e-08 64.7 66 37.9
Atru.chr10.291 Acer truncatum HOM05D007155 ORTHO05D003034 2.5e-08 64.3 67 40.3
MSTRG.22516 Avicennia marina HOM05D007155 ORTHO05D003034 3.3e-08 63.9 67 41.8
THA.LOC104811820 Tarenaya hassleriana HOM05D007155 ORTHO05D003034 3.3e-08 63.9 79 39.2
Ah.15g092760 Amaranthus hybridus HOM05D007155 ORTHO05D003034 4.3e-08 63.5 67 40.3
Lalb_Chr15g0083741 Lupinus albus HOM05D007155 ORTHO05D003034 7.3e-08 62.8 64 40.6
BcaNung06194 Brassica carinata HOM05D007155 ORTHO05D003034 9.6e-08 62.4 75 41.3
Lsat_1_v5_gn_5_153261 Lactuca sativa HOM05D007155 ORTHO05D003034 9.6e-08 62.4 73 34.2
Carub.0007s2104 Capsella rubella HOM05D007155 ORTHO05D003034 1.3e-07 62.0 62 43.5
Phvul.009G243700 Phaseolus vulgaris HOM05D007155 ORTHO05D003034 1.3e-07 62.0 66 40.9
SGA_v2.0_scaffold341G49370 Striga asiatica HOM05D007155 ORTHO05D002534 1.3e-07 62.0 63 38.1
Haze_05243 Corylus avellana HOM05D007155 ORTHO05D003034 1.6e-07 61.6 35 74.3
AT4G20090 Arabidopsis thaliana HOM05D007155 ORTHO05D003034 2.1e-07 61.2 61 42.6
CARHR226930 Cardamine hirsuta HOM05D007155 ORTHO05D003034 2.1e-07 61.2 62 40.3
FAN25G3588 Fragaria x ananassa HOM05D007155 ORTHO05D003034 2.1e-07 61.2 61 45.9
Lalb_Chr02g0154101 Lupinus albus HOM05D007155 ORTHO05D003034 2.1e-07 61.2 64 40.6
Aqoxy1G03675 Aquilegia oxysepala HOM05D007155 ORTHO05D003034 2.8e-07 60.8 80 42.5
Thhalv10010168m.g Eutrema salsugineum HOM05D007155 ORTHO05D003034 2.8e-07 60.8 61 42.6
Sp7g18540 Schrenkiella parvula HOM05D007155 ORTHO05D003034 3.6e-07 60.5 61 42.6
CANSAT21G2211 Cannabis sativa HOM05D007155 ORTHO05D003034 4.8e-07 60.1 67 35.8
Aa31LG6G2510 Aethionema arabicum HOM05D007155 ORTHO05D003034 6.2e-07 59.7 61 45.9
AL7G33760 Arabidopsis lyrata HOM05D007155 ORTHO05D003034 6.2e-07 59.7 61 42.6
Psat1g150440 Pisum sativum HOM05D007155 ORTHO05D003034 6.2e-07 59.7 64 40.6
Ca_01983_v3 Cicer arietinum L. HOM05D007155 ORTHO05D003034 8.1e-07 59.3 64 39.1
Glyma.09G050500 Glycine max HOM05D007155 ORTHO05D003034 8.1e-07 59.3 64 37.5
VMungo1309G1642 Vigna mungo HOM05D007155 ORTHO05D003034 8.1e-07 59.3 66 39.4
Os06g0499301 Oryza sativa ssp. japonica HOM05D007155 ORTHO05D003034 1.1e-06 58.9 78 35.9
A01p11870 Brassica napus HOM05D007155 ORTHO05D003034 1.4e-06 58.5 61 42.6
BraA01t01129Z Brassica rapa HOM05D007155 ORTHO05D003034 1.4e-06 58.5 61 41.0
CANSAT35G0897 Cannabis sativa HOM05D007155 ORTHO05D003034 1.4e-06 58.5 67 35.8
C01p14070 Brassica napus HOM05D007155 ORTHO05D003034 1.8e-06 58.2 61 41.0
BolC1t01374H Brassica oleracea HOM05D007155 ORTHO05D003034 3.1e-06 57.4 61 41.0
ECA233G0666 Erigeron canadensis HOM05D007155 ORTHO05D003034 3.1e-06 57.4 81 32.1
Lj6g0001159 Lotus japonicus HOM05D007155 ORTHO05D003034 3.1e-06 57.4 64 37.5
TPR.G29692 Trifolium pratense HOM05D007155 ORTHO05D003034 3.1e-06 57.4 64 39.1
FAN16G0835 Fragaria x ananassa HOM05D007155 ORTHO05D003034 5.3e-06 56.6 59 44.1
Prupe.4G118800 Prunus persica HOM05D007155 ORTHO05D003034 6.9e-06 56.2 53 47.2
Zm00001eb064820 Zea mays HOM05D007155 ORTHO05D003034 6.9e-06 56.2 63 36.5


User provided reference genes

Program Settings