Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3526 Ceratophyllum demersum HOM05D000108 ORTHO05D001378 5.5e-81 304.3 159 100.0
TAR376G0097 Trochodendron aralioides HOM05D000108 ORTHO05D001378 1.2e-43 180.3 178 59.0
Duzib248G1551 Durio zibethinus HOM05D000108 ORTHO05D001378 3.5e-43 178.7 179 57.5
Cpa.g.sc62.59 Carica papaya HOM05D000108 ORTHO05D001378 6.0e-43 177.9 178 56.7
Manes.15G144100 Manihot esculenta HOM05D000108 ORTHO05D001378 1.7e-42 176.4 176 57.4
RcHm_v2.0_Chr6g0259391 Rosa chinensis HOM05D000108 ORTHO05D001378 2.3e-42 176.0 177 56.5
FvH4_2g07030 Fragaria vesca HOM05D000108 ORTHO05D001378 3.0e-42 175.6 178 55.6
CsaV3_2G014220 Cucumis sativus L. HOM05D000108 ORTHO05D001378 2.5e-41 172.6 174 55.2
ClCG09G017600 Citrullus lanatus HOM05D000108 ORTHO05D001378 4.3e-41 171.8 174 55.7
Gohir.D02G211800 Gossypium hirsutum HOM05D000108 ORTHO05D001378 4.3e-41 171.8 173 58.4
Gorai.005G239700 Gossypium raimondii HOM05D000108 ORTHO05D001378 5.6e-41 171.4 174 58.0
QL11p038632 Quercus lobata HOM05D000108 ORTHO05D001378 5.6e-41 171.4 178 55.1
Actinidia27937 Actinidia chinensis HOM05D000108 ORTHO05D001378 7.3e-41 171.0 176 56.2
Thecc.02G094900 Theobroma cacao HOM05D000108 ORTHO05D001378 9.5e-41 170.6 169 58.0
Gohir.A03G190800 Gossypium hirsutum HOM05D000108 ORTHO05D001378 1.2e-40 170.2 172 57.6
MELO3C021920.2 Cucumis melo HOM05D000108 ORTHO05D001378 2.1e-40 169.5 174 55.2
Aqoxy5G01420 Aquilegia oxysepala HOM05D000108 ORTHO05D001378 3.6e-40 168.7 173 55.5
Ciclev10027659m.g Citrus clementina HOM05D000108 ORTHO05D001378 6.2e-40 167.9 178 52.8
PGSC0003DMG400025904 Solanum tuberosum HOM05D000108 ORTHO05D001378 6.2e-40 167.9 173 56.1
CAN.G322.42 Capsicum annuum HOM05D000108 ORTHO05D001378 8.1e-40 167.5 172 56.4
MSTRG.20132 Avicennia marina HOM05D000108 ORTHO05D001378 1.4e-39 166.8 176 54.0
Hma1.2p1_1543F.1_g289800 Hydrangea macrophylla HOM05D000108 ORTHO05D001378 1.4e-39 166.8 203 51.2
Peaxi162Scf00016g01521 Petunia axillaris HOM05D000108 ORTHO05D001378 1.4e-39 166.8 173 56.6
Potri.004G145800 Populus trichocarpa HOM05D000108 ORTHO05D001378 1.4e-39 166.8 178 55.1
Sed0010848 Sechium edule HOM05D000108 ORTHO05D001378 1.8e-39 166.4 173 55.5
ATR0225G014 Amborella trichopoda HOM05D000108 ORTHO05D001378 2.3e-39 166.0 172 56.4
vmacro19467 Vaccinium macrocarpon HOM05D000108 ORTHO05D001378 2.3e-39 166.0 176 54.5
MD10G1088400 Malus domestica HOM05D000108 ORTHO05D001378 3.1e-39 165.6 178 54.5
CANSAT25G3251 Cannabis sativa HOM05D000108 ORTHO05D001378 4.0e-39 165.2 172 52.3
Nitab4.5_0001401g0070 Nicotiana tabacum HOM05D000108 ORTHO05D001378 4.0e-39 165.2 175 56.6
Nn5g29375 Nelumbo nucifera HOM05D000108 ORTHO05D001378 6.8e-39 164.5 177 55.9
Phvul.003G293500 Phaseolus vulgaris HOM05D000108 ORTHO05D001378 6.8e-39 164.5 173 55.5
Nitab4.5_0003726g0080 Nicotiana tabacum HOM05D000108 ORTHO05D001378 1.2e-38 163.7 173 55.5
GSVIVG01031809001 Vitis vinifera HOM05D000108 ORTHO05D001378 1.2e-38 163.7 173 57.2
Lj4g0019708 Lotus japonicus HOM05D000108 ORTHO05D001378 2.6e-38 162.5 173 55.5
TWI79G0871 Tripterygium wilfordii HOM05D000108 ORTHO05D001378 4.4e-38 161.8 178 51.7
VMungo0251G2641 Vigna mungo HOM05D000108 ORTHO05D001378 7.5e-38 161.0 173 54.9
PSO170G6186 Papaver somniferum HOM05D000108 ORTHO05D001378 1.3e-37 160.2 162 55.6
Psat7g123720 Pisum sativum HOM05D000108 ORTHO05D001378 1.7e-37 159.8 173 51.4
Glyma.02G135700 Glycine max HOM05D000108 ORTHO05D001378 2.2e-37 159.5 173 53.8
Sopen01g050890 Solanum pennellii HOM05D000108 ORTHO05D001378 3.7e-37 158.7 173 53.8
Ca_18653_v3 Cicer arietinum L. HOM05D000108 ORTHO05D001378 1.1e-36 157.1 173 51.4
CiPaw.05G056700 Carya illinoinensis HOM05D000108 ORTHO05D001378 1.4e-36 156.8 176 51.1
Lalb_Chr09g0328141 Lupinus albus HOM05D000108 ORTHO05D001378 1.4e-36 156.8 168 55.4
Glyma.07G209300 Glycine max HOM05D000108 ORTHO05D001378 2.4e-36 156.0 174 53.4
Sc18g0004930 Simmondsia chinensis HOM05D000108 ORTHO05D001378 3.2e-36 155.6 177 50.3
SEGI_27554 Sequoiadendron giganteum HOM05D000108 ORTHO05D001378 4.1e-36 155.2 189 47.6
Solyc01g108670.4 Solanum lycopersicum HOM05D000108 ORTHO05D001378 4.1e-36 155.2 188 50.0
AUR62011421 Chenopodium quinoa HOM05D000108 ORTHO05D001378 5.4e-36 154.8 177 50.3
Oeu010585.1 Olea europaea HOM05D000108 ORTHO05D001378 2.1e-35 152.9 169 53.8
AUR62016639 Chenopodium quinoa HOM05D000108 ORTHO05D001378 4.6e-35 151.8 177 49.7
Dinv42117 Davidia involucrata HOM05D000108 ORTHO05D001378 4.6e-35 151.8 188 50.5
Dinv23596 Davidia involucrata HOM05D005562 ORTHO05D001378 1.7e-34 149.8 185 50.8
Medtr4g087040 Medicago truncatula HOM05D000108 ORTHO05D001378 2.3e-34 149.4 173 49.1
MBI16_g19904_MAGBIO Magnolia biondii HOM05D000108 ORTHO05D001378 5.1e-34 148.3 151 55.6
Ah.01g020020 Amaranthus hybridus HOM05D000108 ORTHO05D001378 8.6e-34 147.5 195 46.7
EL10Ac9g21810 Beta vulgaris HOM05D000108 ORTHO05D001378 1.9e-33 146.4 178 48.3
Migut.B00303 Erythranthe guttata HOM05D000108 ORTHO05D001378 1.9e-33 146.4 174 49.4
Eucgr.I01183 Eucalyptus grandis HOM05D000108 ORTHO05D001378 7.3e-33 144.4 180 50.0
AagrBONN_evm.TU.Sc2ySwM_228.1667 Anthoceros agrestis HOM05D000108 ORTHO05D001378 2.8e-32 142.5 164 48.2
THA.LOC104803444 Tarenaya hassleriana HOM05D000108 ORTHO05D001378 6.2e-32 141.4 174 49.4
Cc02_g18360 Coffea canephora HOM05D000108 ORTHO05D001378 8.1e-32 141.0 175 48.0
Pp3c11_6950 Physcomitrium patens HOM05D000108 ORTHO05D001378 1.2e-30 137.1 164 47.6
Mapoly0029s0045 Marchantia polymorpha HOM05D000108 ORTHO05D001378 1.5e-30 136.7 178 44.9
PGR142G0773 Punica granatum HOM05D000108 ORTHO05D001378 1.5e-30 136.7 179 48.0
arahy.Tifrunner.gnm1.ann1.S11XWG Arachis hypogaea HOM05D000108 ORTHO05D001378 3.4e-30 135.6 167 48.5
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 3.4e-30 135.6 190 47.9
HanXRQChr03g0072141 Helianthus annuus HOM05D000108 ORTHO05D001378 3.4e-30 135.6 170 47.1
Haze_01877 Corylus avellana HOM05D000108 ORTHO05D001378 2.2e-29 132.9 172 51.2
Pp3c1_6090 Physcomitrium patens HOM05D000108 ORTHO05D001378 8.4e-29 131.0 164 48.8
Rhsim05G0079800 Rhododendron simsii HOM05D000108 ORTHO05D001378 1.9e-28 129.8 147 50.3
FAN27G0356 Fragaria x ananassa HOM05D000108 ORTHO05D001378 7.1e-28 127.9 152 50.0
Prupe.8G115500 Prunus persica HOM05D000108 ORTHO05D001378 1.6e-27 126.7 163 47.2
Pp3c5_4080 Physcomitrium patens HOM05D000108 ORTHO05D001378 6.0e-27 124.8 177 43.5
Pp3c27_4630 Physcomitrium patens HOM05D000108 ORTHO05D001378 7.8e-27 124.4 176 44.9
Pp3c5_1180 Physcomitrium patens HOM05D000108 ORTHO05D001378 1.3e-26 123.6 164 45.1
Pp3c5_5310 Physcomitrium patens HOM05D000108 ORTHO05D001378 5.1e-26 121.7 172 41.9
Lj9C361T16 Lonicera japonica HOM05D000108 ORTHO05D001378 6.6e-26 121.3 147 47.6
Pp3c15_1830 Physcomitrium patens HOM05D000108 ORTHO05D001378 1.9e-25 119.8 164 42.1
Pp3c15_1832 Physcomitrium patens HOM05D000108 ORTHO05D001378 1.9e-25 119.8 164 42.1
Hund00314 Selenicereus undatus HOM05D000108 ORTHO05D001378 3.3e-25 119.0 179 43.0
Atru.chr5.2828 Acer truncatum HOM05D000108 ORTHO05D001378 7.3e-25 117.9 86 68.6
Pp3c9_1920 Physcomitrium patens HOM05D000108 ORTHO05D001378 1.1e-23 114.0 165 40.6
ECA240G0498 Erigeron canadensis HOM05D000108 ORTHO05D001378 1.8e-23 113.2 155 45.8
unitig_60.g25451 Utricularia gibba HOM05D000108 ORTHO05D001378 8.9e-23 110.9 176 42.0
Zm00001eb135060 Zea mays HOM05D000108 ORTHO05D001378 4.4e-22 108.6 166 43.4
arahy.Tifrunner.gnm1.ann1.I9YSCG Arachis hypogaea HOM05D000108 ORTHO05D001378 9.9e-22 107.5 147 44.9
FAN15G1080 Fragaria x ananassa HOM05D005562 ORTHO05D001378 1.7e-21 106.7 137 47.4
CBR_g88546 Chara braunii HOM05D000108 ORTHO05D001378 6.4e-21 104.8 174 42.0
Hund03853 Selenicereus undatus HOM05D000108 ORTHO05D001378 8.4e-21 104.4 146 42.5
FAN24G3180 Fragaria x ananassa HOM05D005562 ORTHO05D001378 1.9e-20 103.2 146 43.2
SGA_v2.0_scaffold58G20603 Striga asiatica HOM05D000108 ORTHO05D001378 2.4e-20 102.8 128 47.7
AL3G32440 Arabidopsis lyrata HOM05D000108 ORTHO05D001378 2.1e-19 99.8 176 38.6
FAN27G3443 Fragaria x ananassa HOM05D005562 ORTHO05D001378 6.0e-19 98.2 146 42.5
Sp3g17150 Schrenkiella parvula HOM05D000108 ORTHO05D001378 7.8e-19 97.8 176 38.1
DCAR_022068 Daucus carota HOM05D005562 ORTHO05D001378 1.0e-18 97.4 122 46.7
Os12g0590500 Oryza sativa ssp. japonica HOM05D000108 ORTHO05D001378 1.3e-18 97.1 144 42.4
CBR_g36 Chara braunii HOM05D000108 ORTHO05D001378 1.7e-18 96.7 148 42.6
AT3G19050 Arabidopsis thaliana HOM05D000108 ORTHO05D001378 6.6e-18 94.7 176 37.5
Carub.0003s1888 Capsella rubella HOM05D000108 ORTHO05D001378 8.7e-18 94.4 156 40.4
BcaC05g28528 Brassica carinata HOM05D000108 ORTHO05D001378 4.3e-17 92.0 156 38.5
CARHR094490 Cardamine hirsuta HOM05D000108 ORTHO05D001378 4.3e-17 92.0 176 37.5
SalBow6G5829 Salvia bowleyana HOM05D000108 ORTHO05D001378 2.1e-16 89.7 173 37.0
Lsat_1_v5_gn_9_108981 Lactuca sativa HOM05D000108 ORTHO05D001378 4.0e-15 85.5 148 41.9
Cpa.g.sc26.106 Carica papaya HOM05D005562 ORTHO05D007785 9.0e-15 84.3 118 43.2
ECA236G0887 Erigeron canadensis HOM05D000108 ORTHO05D001378 1.5e-14 83.6 67 67.2
BcaB06g25958 Brassica carinata HOM05D000108 ORTHO05D001378 9.9e-14 80.9 157 36.3
Oeu003690.1 Olea europaea HOM05D000108 ORTHO05D001378 9.9e-14 80.9 84 57.1
BolC5t33358H Brassica oleracea HOM05D000108 ORTHO05D001378 1.2e-11 73.9 156 34.6
BraA05t21894Z Brassica rapa HOM05D000108 ORTHO05D001378 1.2e-11 73.9 180 32.8
Pp3c7_20810 Physcomitrium patens HOM05D000108 ORTHO05D001378 1.6e-11 73.6 171 33.3
Hund11847 Selenicereus undatus HOM05D000108 ORTHO05D001378 2.3e-10 69.7 149 39.6
Lsat_1_v5_gn_7_87541 Lactuca sativa HOM05D000108 ORTHO05D001378 5.1e-10 68.6 61 55.7
Aa31LG8G5870 Aethionema arabicum HOM05D000108 ORTHO05D001378 2.5e-09 66.2 114 37.7
TAR636G1358 Trochodendron aralioides HOM05D000108 ORTHO05D001378 2.5e-09 66.2 81 48.1
Pp3c1_10680 Physcomitrium patens HOM05D000108 ORTHO05D001378 1.4e-07 60.5 149 34.2
Thhalv10019870m.g Eutrema salsugineum HOM05D000108 ORTHO05D001378 7.6e-06 54.7 94 39.4


User provided reference genes

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