Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 3.7e-55 218.0 112 100.0
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 1.3e-47 193.0 112 91.1
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 1.4e-22 109.8 81 69.1
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 1.8e-22 109.4 104 60.6
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 3.1e-22 108.6 108 55.6
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 1.6e-21 106.3 91 60.4
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 2.6e-21 105.5 114 53.5
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 2.6e-21 105.5 105 59.0
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 3.5e-21 105.1 89 65.2
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 4.5e-21 104.8 85 67.1
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 5.9e-21 104.4 82 68.3
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 5.9e-21 104.4 82 68.3
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 7.7e-21 104.0 104 54.8
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 7.7e-21 104.0 106 53.8
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 7.7e-21 104.0 82 68.3
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 7.7e-21 104.0 90 64.4
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 1.0e-20 103.6 105 58.1
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 1.3e-20 103.2 112 52.7
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 1.3e-20 103.2 77 67.5
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 1.7e-20 102.8 81 69.1
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 1.7e-20 102.8 95 62.1
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 2.2e-20 102.4 101 59.4
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 2.2e-20 102.4 111 54.1
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 2.9e-20 102.1 76 64.5
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 2.9e-20 102.1 76 64.5
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 2.9e-20 102.1 76 64.5
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 2.9e-20 102.1 81 70.4
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 3.8e-20 101.7 77 67.5
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 3.8e-20 101.7 77 66.2
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 3.8e-20 101.7 94 61.7
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 3.8e-20 101.7 94 61.7
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 6.5e-20 100.9 77 66.2
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 6.5e-20 100.9 81 66.7
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.1e-19 100.1 94 61.7
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.1e-19 100.1 82 67.1
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.1e-19 100.1 102 59.8
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 1.1e-19 100.1 85 56.5
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 1.1e-19 100.1 84 64.3
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 1.5e-19 99.8 112 52.7
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 1.5e-19 99.8 82 67.1
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 1.5e-19 99.8 91 57.1
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 1.9e-19 99.4 77 64.9
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 1.9e-19 99.4 76 64.5
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 1.9e-19 99.4 83 63.9
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.9e-19 99.4 94 60.6
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 1.9e-19 99.4 81 67.9
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.5e-19 99.0 94 60.6
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 2.5e-19 99.0 83 61.4
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 3.2e-19 98.6 76 63.2
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 3.2e-19 98.6 84 65.5
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 4.2e-19 98.2 127 48.0
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 5.5e-19 97.8 76 64.5
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 7.2e-19 97.4 110 51.8
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 9.4e-19 97.1 84 64.3
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 9.4e-19 97.1 98 52.0
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 9.4e-19 97.1 76 61.8
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 9.4e-19 97.1 98 52.0
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 9.4e-19 97.1 98 52.0
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 9.4e-19 97.1 81 63.0
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 9.4e-19 97.1 84 59.5
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 9.4e-19 97.1 76 63.2
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 1.6e-18 96.3 76 63.2
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 1.6e-18 96.3 86 61.6
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 2.7e-18 95.5 113 48.7
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 2.7e-18 95.5 81 61.7
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 3.6e-18 95.1 100 50.0
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 4.7e-18 94.7 76 60.5
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 4.7e-18 94.7 99 56.6
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 4.7e-18 94.7 88 60.2
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 4.7e-18 94.7 82 63.4
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 6.1e-18 94.4 76 61.8
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 8.0e-18 94.0 76 60.5
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 8.0e-18 94.0 76 61.8
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 1.0e-17 93.6 76 60.5
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 1.4e-17 93.2 76 60.5
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 1.4e-17 93.2 109 52.3
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 1.4e-17 93.2 105 53.3
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 1.4e-17 93.2 104 51.9
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 1.8e-17 92.8 81 59.3
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 2.3e-17 92.4 77 59.7
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 2.3e-17 92.4 112 47.3
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 3.0e-17 92.0 77 61.0
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 3.0e-17 92.0 81 61.7
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 4.0e-17 91.7 77 61.0
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 4.0e-17 91.7 71 66.2
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 4.0e-17 91.7 83 62.7
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 5.2e-17 91.3 106 53.8
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 6.7e-17 90.9 75 60.0
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 6.7e-17 90.9 74 59.5
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 8.8e-17 90.5 77 61.0
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 2.6e-16 89.0 74 60.8
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 4.4e-16 88.2 82 54.9
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 5.7e-16 87.8 80 55.0
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 5.7e-16 87.8 83 60.2
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 7.5e-16 87.4 98 52.0
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 7.5e-16 87.4 108 50.9
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 9.7e-16 87.0 105 50.5
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 1.3e-15 86.7 70 65.7
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 1.7e-15 86.3 108 50.0
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 2.2e-15 85.9 82 56.1
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 3.7e-15 85.1 65 69.2
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 3.7e-15 85.1 65 69.2
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 3.7e-15 85.1 65 69.2
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 6.3e-15 84.3 62 69.4
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 1.1e-14 83.6 62 67.7
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 2.4e-14 82.4 77 55.8
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 2.4e-14 82.4 82 48.8
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 4.1e-14 81.6 62 67.7
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 5.3e-14 81.3 81 55.6
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 5.3e-14 81.3 81 49.4
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 1.2e-13 80.1 96 54.2
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 3.5e-13 78.6 102 44.1
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 3.6e-10 68.6 54 66.7
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 1.4e-09 66.6 84 42.9
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 1.8e-09 66.2 58 60.3
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 4.8e-07 58.2 50 48.0
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 2.4e-06 55.8 67 43.3


User provided reference genes

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