Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3422 Ceratophyllum demersum HOM05D005802 ORTHO05D006992 1.9e-139 499.2 261 100.0
TAR375G0577 Trochodendron aralioides HOM05D005802 ORTHO05D006992 4.3e-83 312.0 285 60.7
Nn6g34003 Nelumbo nucifera HOM05D005802 ORTHO05D006992 1.2e-80 303.9 287 58.9
PSO017G7043 Papaver somniferum HOM05D005802 ORTHO05D006992 4.5e-80 302.0 288 59.4
PSO478G1061 Papaver somniferum HOM05D005802 ORTHO05D006992 5.9e-80 301.6 288 59.4
Potri.014G060000 Populus trichocarpa HOM05D005802 ORTHO05D006992 3.9e-76 288.9 286 58.4
Sabra14G0043900 Salix brachista HOM05D005802 ORTHO05D006992 1.1e-75 287.3 286 57.3
Cpa.g.sc49.162 Carica papaya HOM05D005802 ORTHO05D006992 2.5e-75 286.2 287 58.5
PGR042G3152 Punica granatum HOM05D005802 ORTHO05D006992 7.4e-75 284.6 287 55.1
Duzib133G1160 Durio zibethinus HOM05D005802 ORTHO05D006992 9.7e-75 284.3 289 56.4
COL.COLO4_12497 Corchorus olitorius HOM05D005802 ORTHO05D006992 1.7e-74 283.5 287 56.4
GSVIVG01027639001 Vitis vinifera HOM05D005802 ORTHO05D006992 1.1e-73 280.8 287 56.4
Gohir.A12G094400 Gossypium hirsutum HOM05D005802 ORTHO05D006992 5.3e-73 278.5 287 56.1
vmacro21028 Vaccinium macrocarpon HOM05D005802 ORTHO05D006992 9.1e-73 277.7 268 59.3
Gohir.D12G097200 Gossypium hirsutum HOM05D005802 ORTHO05D006992 1.5e-72 276.9 287 55.4
Prupe.2G138600 Prunus persica HOM05D005802 ORTHO05D006992 2.0e-72 276.6 284 54.9
Ciclev10021687m.g Citrus clementina HOM05D005802 ORTHO05D006992 3.4e-72 275.8 287 55.7
Aqoxy7G00743 Aquilegia oxysepala HOM05D005802 ORTHO05D006992 1.0e-71 274.2 288 53.8
QL04p039160 Quercus lobata HOM05D005802 ORTHO05D006992 1.0e-71 274.2 282 57.4
Thecc.01G381900 Theobroma cacao HOM05D005802 ORTHO05D006992 1.7e-71 273.5 290 54.8
Eucgr.D02489 Eucalyptus grandis HOM05D005802 ORTHO05D006992 2.2e-71 273.1 287 54.4
Gorai.008G105800 Gossypium raimondii HOM05D005802 ORTHO05D006992 3.8e-71 272.3 287 55.4
TWI23G1076 Tripterygium wilfordii HOM05D005802 ORTHO05D006992 1.1e-70 270.8 276 56.2
CiPaw.13G033000 Carya illinoinensis HOM05D005802 ORTHO05D006992 1.4e-70 270.4 287 54.7
Lj3g0015572 Lotus japonicus HOM05D005802 ORTHO05D006992 1.4e-70 270.4 289 54.0
AUR62013665 Chenopodium quinoa HOM05D005802 ORTHO05D006992 1.9e-70 270.0 288 53.1
Manes.05G048500 Manihot esculenta HOM05D005802 ORTHO05D006992 3.2e-70 269.2 287 54.7
Rhsim01G0150000 Rhododendron simsii HOM05D005802 ORTHO05D006992 4.2e-70 268.9 288 54.5
Atru.chr5.259 Acer truncatum HOM05D005802 ORTHO05D006992 5.5e-70 268.5 288 56.2
Haze_02673 Corylus avellana HOM05D005802 ORTHO05D006992 9.4e-70 267.7 291 54.0
arahy.Tifrunner.gnm1.ann1.I9SF1K Arachis hypogaea HOM05D005802 ORTHO05D006992 1.2e-69 267.3 284 54.6
MD02G1209900 Malus domestica HOM05D005802 ORTHO05D006992 1.2e-69 267.3 284 53.5
Medtr4g026180 Medicago truncatula HOM05D005802 ORTHO05D006992 1.6e-69 266.9 289 53.6
CSS0000774 Camellia sinensis var. sinensis HOM05D005802 ORTHO05D006992 4.7e-69 265.4 287 54.0
CANSAT56G0664 Cannabis sativa HOM05D005802 ORTHO05D006992 6.1e-69 265.0 289 53.3
THA.LOC104802463 Tarenaya hassleriana HOM05D005802 ORTHO05D006992 6.1e-69 265.0 292 53.8
RcHm_v2.0_Chr5g0028911 Rosa chinensis HOM05D005802 ORTHO05D006992 2.3e-68 263.1 289 52.6
Sc02g0002770 Simmondsia chinensis HOM05D005802 ORTHO05D006992 3.0e-68 262.7 287 52.6
Aa31LG10G14950 Aethionema arabicum HOM05D005802 ORTHO05D006992 3.9e-68 262.3 289 53.6
CARHR171060 Cardamine hirsuta HOM05D005802 ORTHO05D006992 6.7e-68 261.5 289 53.6
BolC8t51149H Brassica oleracea HOM05D005802 ORTHO05D006992 2.0e-67 260.0 287 53.3
Glyma.01G137000 Glycine max HOM05D005802 ORTHO05D006992 2.0e-67 260.0 292 51.7
C08p35600 Brassica napus HOM05D005802 ORTHO05D006992 2.6e-67 259.6 288 53.1
Phvul.010G077700 Phaseolus vulgaris HOM05D005802 ORTHO05D006992 3.3e-67 259.2 293 52.2
TPR.G5024 Trifolium pratense HOM05D005802 ORTHO05D006992 3.3e-67 259.2 289 52.2
Actinidia12678 Actinidia chinensis HOM05D005802 ORTHO05D006992 4.4e-67 258.8 282 53.5
A09p52850 Brassica napus HOM05D005802 ORTHO05D006992 4.4e-67 258.8 288 52.8
AL5G42970 Arabidopsis lyrata HOM05D005802 ORTHO05D006992 1.7e-66 256.9 288 53.5
AT3G60660 Arabidopsis thaliana HOM05D005802 ORTHO05D006992 2.2e-66 256.5 292 52.7
BcaC07g40584 Brassica carinata HOM05D005802 ORTHO05D006992 2.8e-66 256.1 290 53.4
Thhalv10006164m.g Eutrema salsugineum HOM05D005802 ORTHO05D006992 2.8e-66 256.1 288 53.8
Lsat_1_v5_gn_4_44621 Lactuca sativa HOM05D005802 ORTHO05D006992 3.7e-66 255.8 287 52.6
Cfa011175 Carpinus fangiana HOM05D005802 ORTHO05D006992 4.8e-66 255.4 277 53.4
ClCG09G008930 Citrullus lanatus HOM05D005802 ORTHO05D006992 6.3e-66 255.0 290 52.4
FAN06G1875 Fragaria x ananassa HOM05D005802 ORTHO05D006992 8.2e-66 254.6 303 49.2
MSTRG.17165 Avicennia marina HOM05D005802 ORTHO05D006992 1.8e-65 253.4 285 50.2
Sed0027573 Sechium edule HOM05D005802 ORTHO05D006992 4.1e-65 252.3 289 51.9
Sp5g02580 Schrenkiella parvula HOM05D005802 ORTHO05D006992 7.0e-65 251.5 288 53.1
FAN06G3617 Fragaria x ananassa HOM05D005802 ORTHO05D006992 1.2e-64 250.8 288 50.7
arahy.Tifrunner.gnm1.ann1.GQKS8P Arachis hypogaea HOM05D005802 ORTHO05D006992 1.6e-64 250.4 319 48.0
FAN10G1300 Fragaria x ananassa HOM05D005802 ORTHO05D006992 1.6e-64 250.4 288 51.0
Psat7g217800 Pisum sativum HOM05D005802 ORTHO05D006992 2.6e-64 249.6 290 50.0
Hund27376 Selenicereus undatus HOM05D005802 ORTHO05D006992 2.6e-64 249.6 288 51.4
FAN03G1851 Fragaria x ananassa HOM05D005802 ORTHO05D006992 3.5e-64 249.2 288 50.3
SalBow5G5068 Salvia bowleyana HOM05D005802 ORTHO05D006992 3.5e-64 249.2 287 51.2
HanXRQChr03g0088101 Helianthus annuus HOM05D005802 ORTHO05D006992 5.9e-64 248.4 288 49.0
DCAR_025098 Daucus carota HOM05D005802 ORTHO05D006992 7.7e-64 248.1 280 50.4
Peaxi162Scf01052g00014 Petunia axillaris HOM05D005802 ORTHO05D006992 1.0e-63 247.7 287 51.2
Migut.B01600 Erythranthe guttata HOM05D005802 ORTHO05D006992 1.7e-63 246.9 285 50.2
Dinv44124 Davidia involucrata HOM05D005802 ORTHO05D006992 2.9e-63 246.1 279 51.6
FAN10G3200 Fragaria x ananassa HOM05D005802 ORTHO05D006992 3.8e-63 245.7 288 50.3
CsaV3_7G026130 Cucumis sativus L. HOM05D005802 ORTHO05D006992 5.0e-63 245.4 290 51.4
ATR1153G072 Amborella trichopoda HOM05D005802 ORTHO05D006992 8.5e-63 244.6 287 49.8
TAR375G0251 Trochodendron aralioides HOM05D005802 ORTHO05D006992 8.5e-63 244.6 207 62.3
Carub.0005s2750 Capsella rubella HOM05D005802 ORTHO05D006992 1.2e-61 240.7 279 51.3
Solyc05g050900.4 Solanum lycopersicum HOM05D005802 ORTHO05D006992 1.6e-61 240.4 287 48.4
PGSC0003DMG400007022 Solanum tuberosum HOM05D005802 ORTHO05D006992 1.6e-61 240.4 287 48.4
CAN.G106.25 Capsicum annuum HOM05D005802 ORTHO05D006992 2.7e-61 239.6 295 48.5
AUR62004168 Chenopodium quinoa HOM05D005802 ORTHO05D006992 2.7e-61 239.6 288 50.0
Cc02_g24280 Coffea canephora HOM05D005802 ORTHO05D006992 6.1e-61 238.4 286 47.9
Sopen05g029380 Solanum pennellii HOM05D005802 ORTHO05D006992 6.1e-61 238.4 287 48.1
FAN01G2984 Fragaria x ananassa HOM05D005802 ORTHO05D006992 1.4e-60 237.3 303 48.5
ECA234G0875 Erigeron canadensis HOM05D005802 ORTHO05D006992 2.3e-60 236.5 282 48.6
Os07g0484500 Oryza sativa ssp. japonica HOM05D005802 ORTHO05D006992 1.5e-59 233.8 294 46.6
EL10Ac1g00841 Beta vulgaris HOM05D005802 ORTHO05D006992 2.6e-59 233.0 261 51.3
BraA09t40717Z Brassica rapa HOM05D005802 ORTHO05D006992 5.7e-59 231.9 353 42.8
FvH4_7g11150 Fragaria vesca HOM05D005802 ORTHO05D006992 7.5e-59 231.5 262 50.4
Carub.0005s2739 Capsella rubella HOM05D005802 ORTHO05D006992 1.7e-58 230.3 279 50.5
Zm00001eb321530 Zea mays HOM05D005802 ORTHO05D006992 1.7e-58 230.3 283 45.9
VMungo0331G0187 Vigna mungo HOM05D005802 ORTHO05D006992 2.8e-58 229.6 267 50.6
Ca_02431_v3 Cicer arietinum L. HOM05D005802 ORTHO05D006992 4.8e-58 228.8 251 51.0
Actinidia28320 Actinidia chinensis HOM05D005802 ORTHO05D006992 5.0e-55 218.8 213 57.7
Nitab4.5_0001329g0060 Nicotiana tabacum HOM05D005802 ORTHO05D006992 7.2e-54 214.9 277 45.5
Lj7A534G38 Lonicera japonica HOM05D000908 ORTHO05D000789 4.7e-53 212.2 237 52.3
SGA_v2.0_scaffold153G36973 Striga asiatica HOM05D005802 ORTHO05D006992 2.6e-51 206.5 262 46.6
Lalb_Chr12g0208021 Lupinus albus HOM05D005802 ORTHO05D006992 1.4e-49 200.7 198 56.1
Pp3c6_12030 Physcomitrium patens HOM05D005802 ORTHO05D006992 1.1e-46 191.0 287 39.4
RcHm_v2.0_Chr1g0349231 Rosa chinensis HOM05D005802 ORTHO05D006992 1.5e-46 190.7 210 50.5
Oeu051925.1 Olea europaea HOM05D005802 ORTHO05D006992 1.6e-45 187.2 252 49.6
Nitab4.5_0005050g0030 Nicotiana tabacum HOM05D005802 ORTHO05D006992 6.1e-45 185.3 285 41.4
Oeu051926.1 Olea europaea HOM05D005802 ORTHO05D006992 3.0e-44 183.0 146 66.4
Mapoly0010s0189 Marchantia polymorpha HOM05D005802 ORTHO05D006992 8.8e-44 181.4 278 39.9
AagrBONN_evm.TU.Sc2ySwM_368.1567 Anthoceros agrestis HOM05D005802 ORTHO05D006992 2.4e-41 173.3 275 37.5
SMO347G0664 Selaginella moellendorffii HOM05D005802 ORTHO05D006992 2.0e-35 153.7 220 42.3
MELO3C021033.2 Cucumis melo HOM05D005802 ORTHO05D006992 4.4e-35 152.5 217 43.8
FAN03G0348 Fragaria x ananassa HOM05D005802 ORTHO05D006992 1.4e-33 147.5 123 65.0
FAN03G0906 Fragaria x ananassa HOM05D005802 ORTHO05D006992 5.4e-33 145.6 123 65.0
Ah.05g173880 Amaranthus hybridus HOM05D005802 ORTHO05D006992 1.1e-30 137.9 121 60.3
Actinidia33479 Actinidia chinensis HOM05D005802 ORTHO05D006992 1.6e-29 134.0 145 51.7
RcHm_v2.0_Chr1g0349251 Rosa chinensis HOM05D005802 ORTHO05D006992 2.6e-27 126.7 97 64.9
RcHm_v2.0_Chr1g0349201 Rosa chinensis HOM05D005802 ORTHO05D006992 1.2e-24 117.9 356 30.6
Cc00_g05160 Coffea canephora HOM05D005802 ORTHO05D006992 1.7e-23 114.0 121 55.4
Glyma.03G031466 Glycine max HOM05D005802 ORTHO05D006992 3.9e-23 112.8 97 58.8
Cc00_g05150 Coffea canephora HOM05D005802 ORTHO05D006992 8.6e-23 111.7 124 54.0
SHI22578 Sapria himalayana HOM05D005802 ORTHO05D006992 2.1e-21 107.1 116 50.9
CBR_g48776 Chara braunii HOM05D005802 ORTHO05D006992 4.0e-20 102.8 121 43.0
FAN10G4230 Fragaria x ananassa HOM05D005802 ORTHO05D006992 8.3e-18 95.1 56 76.8
C04p32020 Brassica napus HOM05D010895 ORTHO05D012939 2.4e-17 93.6 137 43.8
ECA240G2706 Erigeron canadensis HOM05D001255 ORTHO05D001246 5.4e-17 92.4 66 65.2
BolC4t24754H Brassica oleracea HOM05D005802 ORTHO05D006992 8.6e-15 85.1 116 46.6
RcHm_v2.0_Chr1g0349171 Rosa chinensis HOM05D005802 ORTHO05D006992 8.6e-15 85.1 58 75.9
Oeu055514.1 Olea europaea HOM05D005802 ORTHO05D006992 1.1e-14 84.7 132 41.7
Cre16.g672500 Chlamydomonas reinhardtii HOM05D005802 ORTHO05D006992 5.6e-14 82.4 132 34.1
RcHm_v2.0_Chr1g0349241 Rosa chinensis HOM05D005802 ORTHO05D006992 8.1e-13 78.6 111 40.5
Hma1.2p1_0072F.1_g038280 Hydrangea macrophylla HOM05D005802 ORTHO05D006992 1.4e-12 77.8 96 50.0
Dinv44127 Davidia involucrata HOM05D005802 ORTHO05D006992 5.2e-12 75.9 53 67.9
Oeu045806.1 Olea europaea HOM05D005802 ORTHO05D006992 8.9e-12 75.1 60 65.0
Ah.05g173870 Amaranthus hybridus HOM05D005802 ORTHO05D006992 1.5e-11 74.3 143 35.0
Lalb_Chr12g0208011 Lupinus albus HOM05D005802 ORTHO05D006992 9.9e-11 71.6 60 65.0
SHI22577 Sapria himalayana HOM05D005802 ORTHO05D006992 1.3e-10 71.2 116 38.8
CARHR170760 Cardamine hirsuta HOM05D005802 ORTHO05D006992 6.0e-08 62.4 48 64.6


User provided reference genes

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