Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 8.5e-224 780.0 393 100.0
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 5.1e-136 488.4 382 66.8
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 8.7e-136 487.6 404 64.6
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 8.7e-136 487.6 383 67.9
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 2.5e-135 486.1 386 65.3
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 1.3e-134 483.8 376 66.8
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 4.8e-134 481.9 375 67.2
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 6.2e-134 481.5 375 66.7
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 1.4e-133 480.3 396 65.4
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.8e-133 479.9 376 67.6
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 5.3e-133 478.4 368 67.4
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 9.0e-133 477.6 390 65.1
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 9.0e-133 477.6 365 69.3
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 9.0e-133 477.6 397 64.0
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 1.2e-132 477.2 413 63.4
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 1.2e-132 477.2 390 65.6
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 2.0e-132 476.5 384 64.8
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 7.6e-132 474.6 373 66.5
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 1.7e-131 473.4 379 66.5
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 3.8e-131 472.2 397 65.0
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 1.9e-130 469.9 364 66.5
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 1.9e-130 469.9 404 63.6
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 1.9e-130 469.9 399 63.7
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 1.9e-130 469.9 381 65.4
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 1.9e-130 469.9 387 65.9
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.2e-130 469.2 399 63.9
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 7.1e-130 468.0 381 66.1
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 7.1e-130 468.0 365 66.6
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 9.3e-130 467.6 422 61.6
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 9.3e-130 467.6 350 69.4
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 9.3e-130 467.6 397 64.2
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 1.2e-129 467.2 383 64.2
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 2.1e-129 466.5 380 65.5
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.7e-129 466.1 370 66.2
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 2.7e-129 466.1 373 65.7
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 4.6e-129 465.3 369 66.7
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 7.9e-129 464.5 380 65.3
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 1.0e-128 464.2 350 69.4
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.8e-128 463.4 381 65.4
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 3.9e-128 462.2 375 64.5
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 6.7e-128 461.5 373 65.4
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 1.1e-127 460.7 377 64.7
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 1.5e-127 460.3 365 64.1
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.5e-127 460.3 373 65.4
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 1.5e-127 460.3 391 63.4
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 1.5e-127 460.3 382 64.4
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 2.5e-127 459.5 375 64.8
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 2.5e-127 459.5 391 63.4
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 4.3e-127 458.8 359 65.5
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 7.4e-127 458.0 394 63.7
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 9.6e-127 457.6 384 64.1
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 9.6e-127 457.6 376 63.8
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 4.8e-126 455.3 355 67.9
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 1.8e-125 453.4 394 60.9
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 4.0e-125 452.2 385 61.6
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 6.9e-125 451.4 361 65.1
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.2e-124 450.7 356 66.0
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 3.4e-124 449.1 392 61.0
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 4.5e-124 448.7 351 64.7
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 7.6e-124 448.0 380 63.9
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 1.0e-123 447.6 408 61.0
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 1.0e-123 447.6 392 61.2
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 1.3e-123 447.2 354 66.4
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 3.2e-122 442.6 406 59.9
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 4.2e-122 442.2 353 62.9
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 1.6e-121 440.3 399 60.7
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 2.7e-121 439.5 351 63.8
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 1.4e-117 427.2 364 60.7
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 3.8e-115 419.1 352 61.1
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 3.8e-115 419.1 352 61.1
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 1.0e-112 411.0 359 63.2
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 1.8e-112 410.2 390 59.0
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 5.3e-109 398.7 398 56.3
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 5.0e-107 392.1 331 61.0
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 6.5e-107 391.7 397 57.4
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 8.5e-99 364.8 368 56.2
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 7.9e-97 358.2 300 64.7
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 4.2e-82 309.3 232 70.3
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.7e-81 306.6 242 67.4
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 6.8e-80 302.0 254 64.6
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 6.5e-75 285.4 274 56.2
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 4.1e-69 266.2 313 53.4
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 2.5e-66 256.9 197 67.5
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 1.1e-58 231.5 162 73.5
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 1.6e-57 227.6 247 54.3
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 8.9e-56 221.9 350 38.6
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 1.9e-53 214.2 165 66.1
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 6.0e-44 182.6 140 64.3
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 1.5e-42 177.9 134 65.7
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 4.1e-37 159.8 102 78.4
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 3.1e-08 63.9 77 49.4


User provided reference genes

Program Settings