Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3399 Ceratophyllum demersum HOM05D005644 ORTHO05D007092 5.5e-92 340.9 164 100.0
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 1.0e-85 320.1 164 90.9
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 2.9e-85 318.5 164 89.0
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 1.1e-84 316.6 164 89.0
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 1.4e-84 316.2 164 89.0
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 1.9e-84 315.8 164 87.2
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 2.5e-84 315.5 164 86.6
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 2.5e-84 315.5 164 88.4
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 3.2e-84 315.1 164 87.8
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 3.2e-84 315.1 164 89.0
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 4.2e-84 314.7 164 88.4
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 5.5e-84 314.3 164 87.8
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 9.4e-84 313.5 164 86.6
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 9.4e-84 313.5 164 89.0
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 9.4e-84 313.5 164 87.8
Phvul.003G254800 Phaseolus vulgaris HOM05D005644 ORTHO05D007092 9.4e-84 313.5 164 85.4
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 9.4e-84 313.5 163 87.7
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 1.2e-83 313.2 164 87.2
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 1.6e-83 312.8 164 86.0
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 2.7e-83 312.0 164 86.6
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 2.7e-83 312.0 164 87.2
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 2.7e-83 312.0 164 88.4
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 3.6e-83 311.6 164 86.6
CiPaw.02G018800 Carya illinoinensis HOM05D005644 ORTHO05D007092 4.7e-83 311.2 164 86.0
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 6.1e-83 310.8 164 86.0
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 6.1e-83 310.8 164 86.6
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 6.1e-83 310.8 164 86.6
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 1.0e-82 310.1 164 85.4
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 1.8e-82 309.3 164 86.0
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 1.8e-82 309.3 164 86.0
CSS0024834 Camellia sinensis var. sinensis HOM05D005644 ORTHO05D007092 2.3e-82 308.9 164 87.8
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 2.3e-82 308.9 164 86.6
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 2.3e-82 308.9 164 86.6
Sed0008907 Sechium edule HOM05D005644 ORTHO05D007092 2.3e-82 308.9 164 84.8
Eucgr.I02428 Eucalyptus grandis HOM05D005644 ORTHO05D007092 3.0e-82 308.5 164 86.6
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 3.0e-82 308.5 164 86.6
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 3.9e-82 308.1 164 84.8
Zm00001eb342630 Zea mays HOM05D005644 ORTHO05D007092 3.9e-82 308.1 164 86.0
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 5.1e-82 307.8 162 85.2
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 5.1e-82 307.8 164 84.8
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 5.1e-82 307.8 164 85.4
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 6.7e-82 307.4 164 83.5
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 1.1e-81 306.6 164 85.4
AL3G51550 Arabidopsis lyrata HOM05D005644 ORTHO05D007092 1.5e-81 306.2 164 83.5
AT2G18290 Arabidopsis thaliana HOM05D005644 ORTHO05D007092 1.5e-81 306.2 164 83.5
Lj4g0022669 Lotus japonicus HOM05D005644 ORTHO05D007092 1.5e-81 306.2 164 84.1
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 2.0e-81 305.8 164 86.0
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 2.0e-81 305.8 164 84.1
Os05g0579800 Oryza sativa ssp. japonica HOM05D005644 ORTHO05D007092 3.3e-81 305.1 164 83.5
MBI02_g12270_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.7e-81 304.3 183 79.2
Aa31LG8G15730 Aethionema arabicum HOM05D005644 ORTHO05D007092 1.3e-80 303.1 164 82.9
BcaB08g34803 Brassica carinata HOM05D005644 ORTHO05D007092 1.7e-80 302.8 164 82.9
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 1.7e-80 302.8 164 82.9
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 1.7e-80 302.8 164 82.9
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 1.7e-80 302.8 164 82.9
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 1.7e-80 302.8 164 84.8
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 1.7e-80 302.8 164 82.9
Glyma.02G055400 Glycine max HOM05D005644 ORTHO05D007092 1.7e-80 302.8 164 84.8
EL10Ac4g07935 Beta vulgaris HOM05D005644 ORTHO05D007092 2.8e-80 302.0 164 83.5
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 2.8e-80 302.0 164 83.5
ATR0594G186 Amborella trichopoda HOM05D005644 ORTHO05D007092 3.7e-80 301.6 164 82.9
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 3.7e-80 301.6 164 84.8
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 3.7e-80 301.6 164 84.8
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 3.7e-80 301.6 164 82.9
Carub.0003s3246 Capsella rubella HOM05D005644 ORTHO05D007092 4.8e-80 301.2 164 82.3
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 4.8e-80 301.2 164 82.3
ClCG10G013900 Citrullus lanatus HOM05D005644 ORTHO05D007092 6.3e-80 300.8 190 74.7
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 6.3e-80 300.8 164 84.8
ECA232G0363 Erigeron canadensis HOM05D005644 ORTHO05D007092 8.2e-80 300.4 164 83.5
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 8.2e-80 300.4 164 82.9
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 8.2e-80 300.4 164 82.9
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 3.1e-79 298.5 164 82.3
HanXRQChr09g0261331 Helianthus annuus HOM05D005644 ORTHO05D007092 3.1e-79 298.5 164 82.3
Zm00001eb294590 Zea mays HOM05D005644 ORTHO05D007092 3.1e-79 298.5 164 82.9
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 6.9e-79 297.4 164 82.3
CANSAT01G2444 Cannabis sativa HOM05D005644 ORTHO05D007092 2.0e-78 295.8 164 81.1
RcHm_v2.0_Chr2g0101251 Rosa chinensis HOM05D005644 ORTHO05D007092 2.0e-78 295.8 164 82.9
Sc16g0002690 Simmondsia chinensis HOM05D005644 ORTHO05D007092 2.0e-78 295.8 164 81.7
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 7.7e-78 293.9 164 82.3
PGR031G1764 Punica granatum HOM05D005644 ORTHO05D007092 1.3e-77 293.1 168 82.1
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 2.2e-77 292.4 164 82.9
Lsat_1_v5_gn_4_151201 Lactuca sativa HOM05D005644 ORTHO05D007092 8.5e-77 290.4 153 86.3
FvH4_5g29620 Fragaria vesca HOM05D005644 ORTHO05D007092 9.4e-76 287.0 162 81.5
AUR62020530 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.2e-75 286.6 164 80.5
AUR62043224 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.2e-75 286.6 164 80.5
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 3.6e-75 285.0 217 65.9
PGR083G1765 Punica granatum HOM05D005644 ORTHO05D007092 8.0e-75 283.9 162 80.9
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 3.9e-74 281.6 203 67.0
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 3.7e-72 275.0 170 75.9
VMungo0251G3244 Vigna mungo HOM05D005644 ORTHO05D007092 3.5e-70 268.5 141 85.8
Atru.chr3.600 Acer truncatum HOM05D005644 ORTHO05D007092 4.5e-70 268.1 162 73.5
AUR62034193 Chenopodium quinoa HOM05D005644 ORTHO05D007092 4.5e-70 268.1 164 75.6
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 4.5e-70 268.1 164 79.9
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 3.8e-69 265.0 146 84.2
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 1.9e-68 262.7 148 84.5
Hma1.2p1_0789F.1_g218290 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 5.2e-66 254.6 134 88.1
BolC7t40857H Brassica oleracea HOM05D005644 ORTHO05D007092 2.2e-64 249.2 172 69.2
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.2e-64 249.2 141 81.6
Sabra05G0100200 Salix brachista HOM05D005644 ORTHO05D007092 9.1e-63 243.8 130 84.6
Mapoly0106s0034 Marchantia polymorpha HOM05D005644 ORTHO05D007092 1.0e-61 240.4 164 67.1
HPP92_023420 Vanilla planifolia HOM05D005644 ORTHO05D007092 8.5e-61 237.3 164 70.1
BcaC06g36396 Brassica carinata HOM05D005644 ORTHO05D007092 5.5e-60 234.6 164 67.1
Pp3c7_6320 Physcomitrium patens HOM05D005644 ORTHO05D007092 5.2e-58 228.0 164 65.2
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 1.2e-57 226.9 130 80.8
SMO137G0236 Selaginella moellendorffii HOM05D005644 ORTHO05D007092 1.5e-57 226.5 164 64.6
AagrBONN_evm.TU.Sc2ySwM_362.2207 Anthoceros agrestis HOM05D005644 ORTHO05D007092 7.5e-57 224.2 167 63.5
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 3.7e-56 221.9 132 79.5
MBI08_g40822_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.7e-56 221.9 200 60.0
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.8e-55 219.5 130 78.5
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 1.1e-52 210.3 117 82.1
MCO15G254 Micromonas commoda HOM05D005644 ORTHO05D007092 7.2e-52 207.6 174 56.9
CARHR108880 Cardamine hirsuta HOM05D005644 ORTHO05D007092 2.1e-51 206.1 112 82.1
PRCOL_00001837 Prasinoderma coloniale HOM05D005644 ORTHO05D007092 1.2e-49 200.3 160 61.2
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 2.4e-47 192.6 164 61.0
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 5.6e-44 181.4 110 77.3
SEGI_22782 Sequoiadendron giganteum HOM05D005644 ORTHO05D007092 1.2e-43 180.3 106 78.3
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.3e-40 170.2 138 61.6
Haze_27504 Corylus avellana HOM05D005644 ORTHO05D007092 2.9e-40 169.1 135 55.6
Cre13.g571850 Chlamydomonas reinhardtii HOM05D005644 ORTHO05D007092 1.4e-39 166.8 144 52.8
CBR_g49399 Chara braunii HOM05D005644 ORTHO05D007092 1.6e-38 163.3 106 68.9
C07p04570 Brassica napus HOM05D005644 ORTHO05D007092 2.2e-24 116.3 125 50.4
DCAR_025950 Daucus carota HOM05D005644 ORTHO05D007092 1.5e-20 103.6 52 88.5
MBI18_g01974_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 9.5e-20 100.9 68 66.2
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 8.1e-19 97.8 109 49.5
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.4e-18 97.1 141 40.4
MBI02_g42708_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.2e-18 95.1 106 51.9
MBI02_g23461_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.5e-17 93.6 157 42.0
Hund21501 Selenicereus undatus HOM05D005644 ORTHO05D007092 4.9e-16 88.6 53 77.4
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.6e-14 82.0 51 72.5
MBI02_g17151_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.1e-13 78.6 106 43.4
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 6.4e-08 61.6 31 83.9
Thecc.08G151500 Theobroma cacao HOM05D005644 ORTHO05D007092 1.1e-07 60.8 33 72.7


User provided reference genes

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