Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 8.2e-92 340.5 188 100.0
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 2.2e-68 262.7 177 77.4
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 8.9e-46 187.6 179 55.3
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 8.9e-46 187.6 189 55.0
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 8.9e-46 187.6 189 55.0
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 3.4e-45 185.7 179 56.4
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 4.4e-45 185.3 181 56.4
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 1.1e-43 180.6 179 55.9
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 1.9e-43 179.9 178 53.4
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 2.4e-43 179.5 177 53.7
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 3.2e-43 179.1 176 54.0
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 7.0e-43 177.9 179 52.0
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 7.0e-43 177.9 180 51.7
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 1.6e-42 176.8 176 54.5
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 6.0e-42 174.9 180 55.6
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 1.3e-41 173.7 180 58.9
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 6.6e-41 171.4 173 52.6
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 1.5e-40 170.2 175 57.1
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 1.5e-40 170.2 180 59.4
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 4.3e-40 168.7 180 58.3
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 4.3e-40 168.7 177 52.5
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 9.5e-40 167.5 177 51.4
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 1.6e-39 166.8 179 49.7
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 1.6e-39 166.8 179 52.5
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 1.6e-39 166.8 180 51.1
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 6.2e-39 164.9 180 59.4
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 1.1e-38 164.1 175 49.1
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 1.4e-38 163.7 178 48.3
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 3.1e-38 162.5 180 50.6
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 3.1e-38 162.5 176 61.4
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 4.0e-38 162.2 179 51.4
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 4.0e-38 162.2 182 50.5
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 4.0e-38 162.2 175 48.6
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 5.2e-38 161.8 180 58.3
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 6.8e-38 161.4 179 46.9
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 6.8e-38 161.4 182 50.5
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 8.9e-38 161.0 181 50.8
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 8.9e-38 161.0 178 55.1
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 1.5e-37 160.2 180 48.9
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.0e-37 159.8 180 50.6
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.6e-37 159.5 180 49.4
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 2.6e-37 159.5 175 49.7
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 2.6e-37 159.5 175 48.0
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 4.4e-37 158.7 178 48.9
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 1.3e-36 157.1 180 48.9
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 1.3e-36 157.1 180 49.4
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 1.3e-36 157.1 180 49.4
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 1.3e-36 157.1 176 49.4
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 1.7e-36 156.8 178 47.2
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 2.2e-36 156.4 180 47.2
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 2.2e-36 156.4 179 45.3
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 6.4e-36 154.8 179 48.6
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 8.3e-36 154.5 174 51.1
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 1.1e-35 154.1 172 48.8
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 3.2e-35 152.5 173 48.0
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 4.1e-35 152.1 180 48.9
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 5.4e-35 151.8 178 48.3
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 9.2e-35 151.0 173 49.7
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 1.6e-34 150.2 173 51.4
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 1.6e-34 150.2 171 45.6
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 2.1e-34 149.8 179 50.3
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 2.7e-34 149.4 180 50.0
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 4.6e-34 148.7 178 45.5
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 1.7e-33 146.7 181 46.4
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 1.7e-33 146.7 179 45.8
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 3.9e-33 145.6 177 49.7
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 6.6e-33 144.8 178 44.4
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 1.1e-32 144.1 171 48.0
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 1.1e-32 144.1 177 44.6
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 5.6e-32 141.7 165 53.3
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 5.6e-32 141.7 171 49.7
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 7.3e-32 141.4 176 44.3
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 7.3e-32 141.4 177 42.9
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 7.3e-32 141.4 177 49.7
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 7.3e-32 141.4 173 48.0
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 9.5e-32 141.0 176 46.0
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 9.5e-32 141.0 178 49.4
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 1.2e-31 140.6 172 46.5
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 1.6e-31 140.2 176 45.5
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 1.6e-31 140.2 115 56.5
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 2.1e-31 139.8 171 49.7
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 3.6e-31 139.0 171 49.7
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 6.2e-31 138.3 173 44.5
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 8.1e-31 137.9 172 47.1
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 8.1e-31 137.9 165 49.7
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 1.8e-30 136.7 171 46.2
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 1.8e-30 136.7 179 43.0
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 4.0e-30 135.6 165 44.8
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 4.0e-30 135.6 175 47.4
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 5.2e-30 135.2 178 51.1
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 6.8e-30 134.8 170 49.4
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 6.8e-30 134.8 174 46.0
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 1.2e-29 134.0 166 49.4
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 1.5e-29 133.7 171 46.2
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 1.5e-29 133.7 179 45.8
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 1.5e-29 133.7 177 47.5
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 1.5e-29 133.7 165 49.7
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 1.5e-29 133.7 173 46.2
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 2.0e-29 133.3 113 57.5
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 3.4e-29 132.5 173 45.7
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 4.4e-29 132.1 165 49.1
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 7.6e-29 131.3 173 43.4
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 9.9e-29 131.0 173 43.9
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 1.7e-28 130.2 173 42.8
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 2.2e-28 129.8 176 40.3
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 8.4e-28 127.9 173 41.6
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 8.4e-28 127.9 178 44.4
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 8.4e-28 127.9 178 44.4
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 1.1e-27 127.5 173 42.2
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 1.1e-27 127.5 178 46.1
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 1.9e-27 126.7 173 41.6
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 1.9e-27 126.7 173 41.6
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 4.1e-27 125.6 173 42.2
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 4.1e-27 125.6 178 45.5
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 2.7e-26 122.9 173 41.6
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 3.5e-26 122.5 169 42.6
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 6.0e-26 121.7 170 40.0
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 3.9e-25 119.0 172 47.7
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 5.1e-25 118.6 173 45.7
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 1.9e-24 116.7 175 39.4
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 4.3e-24 115.5 174 39.1
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 4.3e-24 115.5 174 39.1
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 4.3e-24 115.5 115 53.9
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 1.2e-23 114.0 176 39.8
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 1.4e-22 110.5 175 38.9
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 1.4e-22 110.5 175 38.9
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 9.0e-22 107.8 183 40.4
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 4.4e-21 105.5 176 39.2
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 4.5e-13 79.0 188 29.3
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 5.8e-13 78.6 117 42.7
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 4.9e-12 75.5 89 41.6
CBR_g50926 Chara braunii HOM05D005835 ORTHO05D007187 1.1e-11 74.3 111 36.9
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 3.5e-10 69.3 89 36.0


User provided reference genes

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