Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.0e-96 356.7 174 100.0
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 4.0e-85 318.2 171 86.5
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 5.3e-85 317.8 172 86.0
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 9.0e-85 317.0 171 85.4
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 1.5e-84 316.2 172 85.5
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 3.4e-84 315.1 172 85.5
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 3.4e-84 315.1 172 84.9
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 4.5e-84 314.7 172 84.3
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 4.5e-84 314.7 172 84.3
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 4.5e-84 314.7 171 86.0
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 5.8e-84 314.3 171 84.2
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 5.8e-84 314.3 171 83.6
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 7.6e-84 313.9 172 83.7
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 7.6e-84 313.9 172 85.5
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 7.6e-84 313.9 172 85.5
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 7.6e-84 313.9 174 83.9
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 9.9e-84 313.5 172 84.3
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 9.9e-84 313.5 172 85.5
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 1.3e-83 313.2 174 82.8
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 1.7e-83 312.8 171 85.4
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 1.7e-83 312.8 172 85.5
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.7e-83 312.8 171 85.4
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 1.7e-83 312.8 171 84.8
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 2.2e-83 312.4 174 83.9
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 2.2e-83 312.4 172 83.7
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 2.2e-83 312.4 172 83.7
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 2.9e-83 312.0 172 84.3
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 3.8e-83 311.6 172 83.7
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 3.8e-83 311.6 172 83.7
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 4.9e-83 311.2 171 84.2
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 4.9e-83 311.2 171 83.6
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 4.9e-83 311.2 172 84.3
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 6.4e-83 310.8 171 83.6
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 6.4e-83 310.8 172 83.7
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 6.4e-83 310.8 171 84.2
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 8.4e-83 310.5 174 83.3
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 8.4e-83 310.5 172 83.1
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 1.1e-82 310.1 172 84.3
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 1.1e-82 310.1 171 83.6
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.1e-82 310.1 171 83.6
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 1.1e-82 310.1 174 82.8
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 1.1e-82 310.1 171 83.6
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.4e-82 309.7 172 83.7
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.4e-82 309.7 172 83.7
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 1.4e-82 309.7 171 83.0
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 1.4e-82 309.7 171 83.0
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 1.4e-82 309.7 172 83.7
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 1.4e-82 309.7 171 83.0
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 1.4e-82 309.7 171 84.2
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 2.4e-82 308.9 171 84.2
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 2.4e-82 308.9 172 84.9
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 2.4e-82 308.9 171 84.8
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 2.4e-82 308.9 171 83.6
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 3.2e-82 308.5 172 83.7
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 3.2e-82 308.5 172 83.7
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 3.2e-82 308.5 172 83.1
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 4.2e-82 308.1 171 84.2
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 5.5e-82 307.8 172 82.6
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 5.5e-82 307.8 172 83.1
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 7.1e-82 307.4 172 83.1
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 9.3e-82 307.0 172 83.7
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 1.2e-81 306.6 172 80.8
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 1.6e-81 306.2 171 83.6
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 1.6e-81 306.2 171 83.0
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 2.1e-81 305.8 172 82.6
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 2.1e-81 305.8 171 83.6
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 2.1e-81 305.8 171 83.6
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 2.1e-81 305.8 171 83.0
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 4.6e-81 304.7 171 82.5
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 6.0e-81 304.3 174 82.2
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 7.9e-81 303.9 172 82.0
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 7.9e-81 303.9 171 82.5
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 7.9e-81 303.9 172 83.7
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 1.0e-80 303.5 171 81.9
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 1.0e-80 303.5 171 82.5
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 1.0e-80 303.5 172 82.0
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 1.0e-80 303.5 171 82.5
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 1.0e-80 303.5 171 83.0
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 1.8e-80 302.8 172 82.0
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 1.8e-80 302.8 171 80.7
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 1.8e-80 302.8 171 80.7
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 2.3e-80 302.4 171 81.9
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 2.3e-80 302.4 171 81.9
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 2.3e-80 302.4 171 81.9
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 2.3e-80 302.4 171 81.9
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 2.3e-80 302.4 172 81.4
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 3.0e-80 302.0 171 81.3
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 3.0e-80 302.0 171 81.9
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 3.0e-80 302.0 171 81.9
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 3.0e-80 302.0 171 81.3
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 3.0e-80 302.0 171 81.9
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 5.1e-80 301.2 171 81.9
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 5.1e-80 301.2 171 81.9
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 5.1e-80 301.2 171 81.9
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 5.1e-80 301.2 171 81.3
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 5.1e-80 301.2 172 80.2
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 6.7e-80 300.8 171 81.3
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 6.7e-80 300.8 171 80.7
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 1.9e-79 299.3 171 79.5
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 1.9e-79 299.3 171 78.9
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 2.5e-79 298.9 171 80.7
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.3e-79 298.5 171 81.3
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 2.1e-78 295.8 169 82.2
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 3.7e-78 295.0 170 80.0
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 1.8e-77 292.7 171 78.9
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 5.8e-76 287.7 203 70.0
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 1.0e-75 287.0 172 79.1
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 2.5e-74 282.3 171 76.6
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 4.6e-73 278.1 176 76.7
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 1.6e-65 253.1 134 87.3
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 3.9e-64 248.4 167 69.5
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 6.3e-62 241.1 174 65.5
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 8.5e-59 230.7 138 79.7
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 4.2e-58 228.4 172 57.0
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 6.3e-54 214.5 132 76.5
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 1.7e-43 179.9 133 69.9
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 6.3e-38 161.4 121 65.3
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 5.0e-35 151.8 74 89.2
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 5.2e-32 141.7 94 73.4
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 8.3e-30 134.4 105 61.0
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 1.8e-16 90.1 44 86.4
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.9e-11 72.4 37 73.0
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.5e-10 70.5 32 96.9


User provided reference genes

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