Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3300 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 6.2e-100 367.5 186 100.0
CDE04G3174 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 7.9e-87 323.9 214 80.8
CDE06G2627 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 2.4e-51 206.1 170 65.9
Prupe.6G176600 Prunus persica HOM05D004487 ORTHO05D005483 9.4e-32 141.0 136 52.2
CiPaw.04G093900 Carya illinoinensis HOM05D004487 ORTHO05D005483 8.3e-28 127.9 167 44.9
Phvul.009G211400 Phaseolus vulgaris HOM05D004487 ORTHO05D005483 8.3e-28 127.9 169 49.1
Prupe.8G078400 Prunus persica HOM05D004487 ORTHO05D005483 8.3e-28 127.9 154 46.1
CANSAT01G2370 Cannabis sativa HOM05D004487 ORTHO05D005483 4.1e-27 125.6 159 45.3
ClCG05G021300 Citrullus lanatus HOM05D004487 ORTHO05D005483 4.1e-27 125.6 213 37.1
MD01G1016500 Malus domestica HOM05D004487 ORTHO05D005483 4.1e-27 125.6 167 40.7
Thecc.01G110300 Theobroma cacao HOM05D004487 ORTHO05D005483 5.4e-27 125.2 242 36.8
Nn8g40276 Nelumbo nucifera HOM05D004487 ORTHO05D005483 1.2e-26 124.0 213 37.6
Haze_05964 Corylus avellana HOM05D004487 ORTHO05D005483 2.0e-26 123.2 196 38.3
Gorai.007G062000 Gossypium raimondii HOM05D004487 ORTHO05D005483 2.0e-26 123.2 242 36.8
COL.COLO4_11036 Corchorus olitorius HOM05D004487 ORTHO05D005483 3.5e-26 122.5 241 36.5
Gohir.D11G056800 Gossypium hirsutum HOM05D004487 ORTHO05D005483 3.5e-26 122.5 242 36.8
arahy.Tifrunner.gnm1.ann1.Z7G166 Arachis hypogaea HOM05D004487 ORTHO05D005483 5.9e-26 121.7 170 41.2
Manes.12G140400 Manihot esculenta HOM05D004487 ORTHO05D005483 5.9e-26 121.7 166 45.8
MD15G1334800 Malus domestica HOM05D004487 ORTHO05D005483 7.7e-26 121.3 167 39.5
QL06p033465 Quercus lobata HOM05D004487 ORTHO05D005483 7.7e-26 121.3 234 35.9
Glyma.15G199500 Glycine max HOM05D004487 ORTHO05D005483 1.7e-25 120.2 168 45.8
Sopen03g029710 Solanum pennellii HOM05D004487 ORTHO05D005483 1.7e-25 120.2 170 42.4
TAR625G1215 Trochodendron aralioides HOM05D004487 ORTHO05D005483 1.7e-25 120.2 241 36.9
Atru.chr3.204 Acer truncatum HOM05D004487 ORTHO05D005483 2.3e-25 119.8 171 44.4
Nitab4.5_0007717g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 2.3e-25 119.8 169 40.2
MELO3C007790.2 Cucumis melo HOM05D004487 ORTHO05D005483 3.8e-25 119.0 159 44.0
CsaV3_6G045820 Cucumis sativus L. HOM05D004487 ORTHO05D005483 3.8e-25 119.0 159 44.0
Gohir.A11G053300 Gossypium hirsutum HOM05D004487 ORTHO05D005483 3.8e-25 119.0 242 36.0
Nn2g14563 Nelumbo nucifera HOM05D004487 ORTHO05D005483 3.8e-25 119.0 169 43.2
GSVIVG01022203001 Vitis vinifera HOM05D004487 ORTHO05D005483 5.0e-25 118.6 157 45.9
arahy.Tifrunner.gnm1.ann1.0Q3DRY Arachis hypogaea HOM05D004487 ORTHO05D005483 6.6e-25 118.2 171 39.8
PGSC0003DMG400015213 Solanum tuberosum HOM05D004487 ORTHO05D005483 6.6e-25 118.2 170 41.8
Nitab4.5_0001495g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 1.1e-24 117.5 169 40.2
arahy.Tifrunner.gnm1.ann1.7417N6 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.5e-24 117.1 171 40.4
Potri.007G085100 Populus trichocarpa HOM05D004487 ORTHO05D005483 1.5e-24 117.1 172 43.0
Duzib147G1438 Durio zibethinus HOM05D004487 ORTHO05D005483 1.9e-24 116.7 241 38.2
Solyc03g019910.3 Solanum lycopersicum HOM05D004487 ORTHO05D005483 2.5e-24 116.3 157 44.6
arahy.Tifrunner.gnm1.ann1.10QJ8K Arachis hypogaea HOM05D004487 ORTHO05D005483 3.3e-24 115.9 222 36.0
Cc02_g15410 Coffea canephora HOM05D004487 ORTHO05D005483 3.3e-24 115.9 159 43.4
Gohir.1Z049552 Gossypium hirsutum HOM05D004487 ORTHO05D005483 3.3e-24 115.9 167 41.9
arahy.Tifrunner.gnm1.ann1.NRP8RH Arachis hypogaea HOM05D004487 ORTHO05D005483 5.5e-24 115.2 220 35.5
FvH4_1g21950 Fragaria vesca HOM05D004487 ORTHO05D005483 5.5e-24 115.2 157 44.6
HanXRQChr14g0458831 Helianthus annuus HOM05D004487 ORTHO05D005483 5.5e-24 115.2 161 43.5
Lalb_Chr11g0075201 Lupinus albus HOM05D004487 ORTHO05D005483 7.2e-24 114.8 170 43.5
Hma1.2p1_0486F.1_g163280 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 1.6e-23 113.6 194 41.2
CAN.G861.28 Capsicum annuum HOM05D004487 ORTHO05D005483 2.1e-23 113.2 166 41.0
ECA238G1615 Erigeron canadensis HOM05D004487 ORTHO05D005483 2.1e-23 113.2 226 37.2
Glyma.09G092600 Glycine max HOM05D004487 ORTHO05D005483 2.1e-23 113.2 169 46.2
PGR004G1100 Punica granatum HOM05D004487 ORTHO05D005483 2.1e-23 113.2 158 43.0
arahy.Tifrunner.gnm1.ann1.S1NDRU Arachis hypogaea HOM05D004487 ORTHO05D005483 2.8e-23 112.8 171 39.8
Lj3g0008934 Lotus japonicus HOM05D004487 ORTHO05D005483 3.6e-23 112.5 217 35.0
Peaxi162Scf00171g00006 Petunia axillaris HOM05D004487 ORTHO05D005483 6.1e-23 111.7 181 38.1
Ciclev10026392m.g Citrus clementina HOM05D004487 ORTHO05D005483 8.0e-23 111.3 169 40.8
TPR.G36682 Trifolium pratense HOM05D005330 ORTHO05D006489 8.0e-23 111.3 172 39.0
FvH4_1g25670 Fragaria vesca HOM05D004487 ORTHO05D005483 1.0e-22 110.9 157 43.3
Potri.005G082500 Populus trichocarpa HOM05D004487 ORTHO05D005483 1.0e-22 110.9 149 44.3
TPR.G33715 Trifolium pratense HOM05D004487 ORTHO05D005483 1.0e-22 110.9 170 40.6
Migut.H01422 Erythranthe guttata HOM05D004487 ORTHO05D005483 1.4e-22 110.5 169 40.2
TWI74G0090 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 1.4e-22 110.5 241 36.1
CSS0025780 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 2.3e-22 109.8 159 44.0
FAN28G1272 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.3e-22 109.8 153 42.5
FAN28G1914 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.3e-22 109.8 153 42.5
FAN19G1427 Fragaria x ananassa HOM05D004487 ORTHO05D005483 3.0e-22 109.4 154 42.9
FAN23G0375 Fragaria x ananassa HOM05D004487 ORTHO05D005483 3.0e-22 109.4 154 42.9
Rhsim05G0180000 Rhododendron simsii HOM05D004487 ORTHO05D005483 3.0e-22 109.4 154 40.3
RcHm_v2.0_Chr2g0115971 Rosa chinensis HOM05D004487 ORTHO05D005483 3.0e-22 109.4 157 42.0
Sabra07G0070400 Salix brachista HOM05D004487 ORTHO05D005483 5.2e-22 108.6 173 39.3
arahy.Tifrunner.gnm1.ann1.9RVJ5A Arachis hypogaea HOM05D004487 ORTHO05D005483 6.8e-22 108.2 153 44.4
ClCG01G019130 Citrullus lanatus HOM05D004487 ORTHO05D005483 6.8e-22 108.2 155 40.6
MSTRG.14740 Avicennia marina HOM05D004487 ORTHO05D005483 8.9e-22 107.8 156 41.0
MBI04_g31212_MAGBIO Magnolia biondii HOM05D004487 ORTHO05D005483 1.2e-21 107.5 159 39.6
vmacro18624 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 1.2e-21 107.5 160 42.5
vmacro21317 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 1.2e-21 107.5 159 42.1
Ah.04g161200 Amaranthus hybridus HOM05D004487 ORTHO05D005483 2.0e-21 106.7 137 47.4
Lj2A929T16 Lonicera japonica HOM05D004487 ORTHO05D005483 2.0e-21 106.7 220 38.2
FAN19G3081 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.6e-21 106.3 153 42.5
Sc16g0008840 Simmondsia chinensis HOM05D004487 ORTHO05D005483 2.6e-21 106.3 144 50.0
AUR62005250 Chenopodium quinoa HOM05D004487 ORTHO05D005483 3.4e-21 105.9 169 40.8
FAN26G2580 Fragaria x ananassa HOM05D004487 ORTHO05D005483 3.4e-21 105.9 154 41.6
AUR62000713 Chenopodium quinoa HOM05D004487 ORTHO05D005483 4.4e-21 105.5 169 40.8
EL10Ac4g09863 Beta vulgaris HOM05D004487 ORTHO05D005483 1.3e-20 104.0 167 38.9
Ca_23004_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 1.3e-20 104.0 237 33.8
HanXRQChr07g0202331 Helianthus annuus HOM05D004487 ORTHO05D005483 2.2e-20 103.2 161 39.8
Carub.0007s0150 Capsella rubella HOM05D004487 ORTHO05D005483 8.3e-20 101.3 166 41.0
Lsat_1_v5_gn_2_120680 Lactuca sativa HOM05D004487 ORTHO05D005483 1.1e-19 100.9 173 37.6
arahy.Tifrunner.gnm1.ann1.32WU9K Arachis hypogaea HOM05D004487 ORTHO05D005483 1.4e-19 100.5 167 37.7
VMungo1309G0247 Vigna mungo HOM05D004487 ORTHO05D005483 1.8e-19 100.1 231 38.1
Nitab4.5_0007222g0010 Nicotiana tabacum HOM05D004487 ORTHO05D005483 3.1e-19 99.4 158 37.3
Actinidia33369 Actinidia chinensis HOM05D004487 ORTHO05D005483 5.4e-19 98.6 215 36.3
Aqoxy2G03854 Aquilegia oxysepala HOM05D004487 ORTHO05D005483 5.4e-19 98.6 154 44.8
DCAR_014253 Daucus carota HOM05D004487 ORTHO05D005483 5.4e-19 98.6 171 39.8
Nitab4.5_0000477g0120 Nicotiana tabacum HOM05D004487 ORTHO05D005483 5.4e-19 98.6 165 36.4
Psat2g176760 Pisum sativum HOM05D004487 ORTHO05D005483 7.0e-19 98.2 190 35.8
Ca_25628_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 9.2e-19 97.8 166 36.7
Actinidia08329 Actinidia chinensis HOM05D004487 ORTHO05D005483 1.6e-18 97.1 235 34.0
Lj2A942G27 Lonicera japonica HOM05D004487 ORTHO05D005483 3.5e-18 95.9 166 39.8
unitig_22.g6757 Utricularia gibba HOM05D004487 ORTHO05D005483 3.5e-18 95.9 168 40.5
arahy.Tifrunner.gnm1.ann1.L7ETT7 Arachis hypogaea HOM05D004487 ORTHO05D005483 5.9e-18 95.1 163 36.2
Os08g0290400 Oryza sativa ssp. japonica HOM05D004487 ORTHO05D005483 7.8e-18 94.7 167 38.9
arahy.Tifrunner.gnm1.ann1.Y72RXW Arachis hypogaea HOM05D004487 ORTHO05D005483 1.0e-17 94.4 170 35.9
Oeu040918.3 Olea europaea HOM05D004487 ORTHO05D005483 1.0e-17 94.4 210 32.9
AT4G39630 Arabidopsis thaliana HOM05D004487 ORTHO05D005483 1.7e-17 93.6 154 42.9
Aa31LG6G15640 Aethionema arabicum HOM05D004487 ORTHO05D005483 5.0e-17 92.0 169 37.9
arahy.Tifrunner.gnm1.ann1.I45DC0 Arachis hypogaea HOM05D004487 ORTHO05D005483 8.6e-17 91.3 150 39.3
TAR626G1474 Trochodendron aralioides HOM05D004487 ORTHO05D005483 1.1e-16 90.9 219 34.2
ATR0210G008 Amborella trichopoda HOM05D004487 ORTHO05D005483 1.5e-16 90.5 162 40.7
AL7G11780 Arabidopsis lyrata HOM05D004487 ORTHO05D005483 2.5e-16 89.7 167 39.5
Zm00001eb192330 Zea mays HOM05D004487 ORTHO05D005483 2.5e-16 89.7 152 40.1
Hma1.2p1_0375F.1_g138570 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 4.3e-16 89.0 116 44.0
Sp7g04740 Schrenkiella parvula HOM05D004487 ORTHO05D005483 5.6e-16 88.6 167 37.7
SEGI_02201 Sequoiadendron giganteum HOM05D004487 ORTHO05D005483 7.3e-16 88.2 176 31.2
CARHR247100 Cardamine hirsuta HOM05D004487 ORTHO05D005483 1.2e-15 87.4 154 41.6
SGA_v2.0_scaffold106G30591 Striga asiatica HOM05D004487 ORTHO05D005483 3.6e-15 85.9 162 36.4
C04p44290 Brassica napus HOM05D004487 ORTHO05D005483 6.1e-15 85.1 159 34.6
MELO3C012399.2 Cucumis melo HOM05D004487 ORTHO05D005483 6.1e-15 85.1 47 83.0
CsaV3_5G036000 Cucumis sativus L. HOM05D004487 ORTHO05D005483 6.1e-15 85.1 47 83.0
arahy.Tifrunner.gnm1.ann1.4M30AQ Arachis hypogaea HOM05D004487 ORTHO05D005483 1.0e-14 84.3 157 35.0
BcaC02g09572 Brassica carinata HOM05D004487 ORTHO05D005483 1.4e-14 84.0 161 34.8
Thhalv10027902m.g Eutrema salsugineum HOM05D004487 ORTHO05D005483 1.4e-14 84.0 168 35.7
Lj6g0018564 Lotus japonicus HOM05D004487 ORTHO05D005483 1.8e-14 83.6 101 45.5
THA.LOC104807718 Tarenaya hassleriana HOM05D004487 ORTHO05D005483 5.2e-14 82.0 168 34.5
Eucgr.I00528 Eucalyptus grandis HOM05D004487 ORTHO05D005483 8.9e-14 81.3 49 81.6
HPP92_005242 Vanilla planifolia HOM05D004487 ORTHO05D005483 1.2e-13 80.9 144 37.5
BcaB06g27071 Brassica carinata HOM05D004487 ORTHO05D005483 2.0e-13 80.1 160 35.6
Lj4A903G12 Lonicera japonica HOM05D004487 ORTHO05D005483 2.0e-13 80.1 166 36.7
BraA04t16724Z Brassica rapa HOM05D004487 ORTHO05D005483 2.6e-13 79.7 159 33.3
CARHR215520 Cardamine hirsuta HOM05D004487 ORTHO05D005483 2.6e-13 79.7 155 36.8
A04p10610 Brassica napus HOM05D004487 ORTHO05D005483 4.4e-13 79.0 151 34.4
BolC4t26003H Brassica oleracea HOM05D004487 ORTHO05D005483 4.4e-13 79.0 175 32.6
TWI53G0384 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 5.8e-13 78.6 46 78.3
CSS0002847 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 2.2e-12 76.6 72 59.7
Sp7g36260 Schrenkiella parvula HOM05D004487 ORTHO05D005483 6.4e-12 75.1 137 35.0
SHI54251 Sapria himalayana HOM05D004487 ORTHO05D005483 2.4e-11 73.2 212 29.2
CSS0022213 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 1.2e-10 70.9 52 67.3
arahy.Tifrunner.gnm1.ann1.ZIF87W Arachis hypogaea HOM05D004487 ORTHO05D005483 2.0e-10 70.1 135 34.8
Dinv13358 Davidia involucrata HOM05D004487 ORTHO05D005483 2.0e-10 70.1 110 35.5
Sabra05G0067500 Salix brachista HOM05D004487 ORTHO05D005483 1.0e-09 67.8 203 31.0
CSS0015836 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 2.3e-09 66.6 39 84.6
Oeu043116.1 Olea europaea HOM05D004487 ORTHO05D005483 1.9e-08 63.5 131 35.1
SGA_v2.0_scaffold83G26423 Striga asiatica HOM05D004487 ORTHO05D005483 3.3e-08 62.8 46 60.9
arahy.Tifrunner.gnm1.ann1.E9WDF1 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.8e-06 57.0 92 41.3


User provided reference genes

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