Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 1.5e-272 942.2 461 100.0
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 6.8e-140 501.5 457 56.5
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.4e-139 499.2 457 56.2
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 5.8e-139 498.4 453 57.0
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 7.3e-134 481.5 462 52.4
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.0e-131 473.4 458 52.8
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 5.8e-131 471.9 467 52.0
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 9.9e-131 471.1 463 52.7
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 1.3e-130 470.7 467 52.0
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 8.4e-130 468.0 458 52.4
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 1.9e-129 466.8 452 52.7
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 9.2e-129 464.5 451 52.5
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 4.6e-128 462.2 457 52.5
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 1.1e-126 457.6 453 51.4
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 1.5e-126 457.2 457 52.1
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.9e-126 456.8 456 52.4
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 4.7e-125 452.2 457 51.2
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 4.0e-124 449.1 452 51.1
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 2.6e-123 446.4 476 51.1
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 4.4e-123 445.7 452 50.7
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 1.3e-122 444.1 453 50.3
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 2.7e-120 436.4 452 52.4
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 1.7e-119 433.7 460 47.8
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 9.6e-118 427.9 451 48.1
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 2.1e-117 426.8 451 48.1
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 9.0e-116 421.4 457 47.7
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 1.5e-115 420.6 476 50.4
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 2.0e-115 420.2 454 50.0
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 5.8e-115 418.7 462 48.5
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 1.3e-114 417.5 461 48.6
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 1.3e-114 417.5 458 48.7
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 6.4e-114 415.2 474 49.4
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.9e-113 413.7 455 48.1
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 1.9e-113 413.7 456 47.1
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.4e-113 413.3 455 47.7
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 5.4e-113 412.1 455 47.5
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 7.1e-113 411.8 458 47.2
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 7.1e-113 411.8 455 47.3
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 3.5e-112 409.5 459 47.1
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 1.3e-111 407.5 484 45.9
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 6.7e-111 405.2 451 47.7
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 8.7e-111 404.8 454 45.8
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 8.7e-111 404.8 455 47.3
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 1.1e-110 404.4 467 48.4
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 1.9e-110 403.7 461 46.6
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 4.3e-110 402.5 456 46.3
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 4.3e-110 402.5 454 47.1
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 5.6e-110 402.1 471 47.3
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 5.6e-110 402.1 462 44.8
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 7.4e-110 401.7 467 47.5
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 7.4e-110 401.7 460 47.6
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 2.1e-109 400.2 477 46.8
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 2.8e-109 399.8 457 46.2
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 3.6e-109 399.4 470 48.1
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 3.6e-109 399.4 483 47.0
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 6.2e-109 398.7 452 47.8
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 3.1e-108 396.4 457 46.8
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 5.3e-108 395.6 466 44.2
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 1.2e-107 394.4 476 46.4
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 2.6e-107 393.3 471 46.1
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 3.4e-107 392.9 465 46.9
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 1.3e-106 391.0 472 46.6
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 3.2e-105 386.3 469 44.3
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 7.1e-105 385.2 448 47.1
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 1.6e-104 384.0 472 45.8
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 7.9e-104 381.7 460 46.5
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 3.0e-103 379.8 461 46.2
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 1.3e-101 374.4 462 45.7
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 9.0e-100 368.2 452 45.6
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 2.6e-99 366.7 475 45.3
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 2.9e-98 363.2 449 44.8
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 3.8e-98 362.8 463 43.4
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 5.5e-97 359.0 472 45.1
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 5.5e-97 359.0 448 43.8
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 1.3e-95 354.4 463 44.3
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 5.7e-94 349.0 410 46.3
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.6e-93 347.4 443 45.4
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 4.1e-92 342.8 459 42.3
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 5.3e-92 342.4 452 42.7
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 7.6e-91 338.6 430 44.4
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 1.3e-90 337.8 455 45.1
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.7e-90 337.4 475 41.1
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 2.5e-89 333.6 451 42.8
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 5.5e-89 332.4 452 41.6
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 1.2e-88 331.3 453 42.6
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 1.6e-88 330.9 453 42.4
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 1.6e-88 330.9 453 42.4
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 6.1e-88 328.9 455 44.2
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 2.5e-86 323.6 450 39.6
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 9.7e-86 321.6 452 41.6
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 9.1e-84 315.1 304 54.9
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 1.2e-83 314.7 455 40.2
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 7.7e-83 312.0 454 40.7
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 5.0e-82 309.3 453 40.0
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 2.3e-79 300.4 321 50.5
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 7.4e-78 295.4 452 36.5
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.3e-77 294.7 368 43.8
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 2.0e-75 287.3 454 36.8
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 4.5e-75 286.2 450 39.3
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 6.3e-69 265.8 496 34.1
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 1.5e-62 244.6 324 44.1
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.3e-62 243.4 286 49.0
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 2.4e-60 237.3 276 49.6
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 2.5e-57 227.3 333 40.2
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 4.5e-51 206.5 508 30.3
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 2.9e-50 203.8 250 44.8
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 2.8e-48 197.2 240 46.7
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 4.7e-40 169.9 385 31.2
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 4.9e-37 159.8 454 26.9
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 4.0e-31 140.2 149 46.3
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 5.4e-28 129.8 202 38.1
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 3.0e-26 124.0 552 23.9
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 6.6e-26 122.9 99 58.6
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 6.0e-19 99.8 160 38.1
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 1.0e-18 99.0 119 45.4
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 1.7e-18 98.2 89 49.4
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 2.8e-16 90.9 129 39.5
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.6e-14 84.3 64 59.4
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 3.4e-14 84.0 85 44.7
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 7.6e-14 82.8 90 46.7
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 2.9e-13 80.9 247 27.9
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 1.9e-12 78.2 74 62.2
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 2.4e-12 77.8 102 37.3
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 3.2e-12 77.4 77 59.7
Oeu037483.1 Olea europaea HOM05D006323 ORTHO05D007827 1.5e-06 58.5 141 34.8
HPP92_006886 Vanilla planifolia HOM05D003519 ORTHO05D004443 4.4e-06 57.0 128 25.8


User provided reference genes

Program Settings