Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3236 Ceratophyllum demersum HOM05D000751 ORTHO05D043866 1.1e-276 956.1 484 100.0
CDE06G1075 Ceratophyllum demersum HOM05D000751 ORTHO05D043866 4.3e-177 625.2 694 55.0
MBI15_g40104_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 7.4e-20 102.8 413 27.1
Manes.09G116700 Manihot esculenta HOM05D000751 ORTHO05D000889 1.8e-18 98.2 400 28.5
TAR623G0489 Trochodendron aralioides HOM05D000751 ORTHO05D000889 4.1e-18 97.1 432 27.3
Peaxi162Scf00732g00435 Petunia axillaris HOM05D000751 ORTHO05D000889 1.3e-16 92.0 395 27.3
Nitab4.5_0003003g0020 Nicotiana tabacum HOM05D000751 ORTHO05D000889 2.9e-16 90.9 374 28.9
TAR369G0772 Trochodendron aralioides HOM05D000751 ORTHO05D000889 6.5e-16 89.7 432 28.2
Ciclev10011044m.g Citrus clementina HOM05D000751 ORTHO05D000889 1.1e-15 89.0 407 27.0
Manes.08G174000 Manihot esculenta HOM05D000751 ORTHO05D000889 1.1e-15 89.0 398 29.6
COL.COLO4_16550 Corchorus olitorius HOM05D000751 ORTHO05D000889 1.4e-15 88.6 398 28.1
Gorai.005G005100 Gossypium raimondii HOM05D000751 ORTHO05D000889 3.2e-15 87.4 403 26.8
CsaV3_4G027110 Cucumis sativus L. HOM05D000751 ORTHO05D000889 5.5e-15 86.7 403 27.5
FAN09G1566 Fragaria x ananassa HOM05D000751 ORTHO05D000889 5.5e-15 86.7 469 25.2
FAN14G5618 Fragaria x ananassa HOM05D000751 ORTHO05D000889 5.5e-15 86.7 451 26.4
GSVIVG01030201001 Vitis vinifera HOM05D000751 ORTHO05D000889 7.2e-15 86.3 356 28.7
Nitab4.5_0000330g0060 Nicotiana tabacum HOM05D000751 ORTHO05D000889 9.4e-15 85.9 371 27.5
FvH4_6g10110 Fragaria vesca HOM05D000751 ORTHO05D000889 1.2e-14 85.5 462 25.3
Atru.chr8.2384 Acer truncatum HOM05D000751 ORTHO05D000889 1.6e-14 85.1 451 24.6
CDE04G2975 Ceratophyllum demersum HOM05D000751 ORTHO05D000889 3.6e-14 84.0 382 27.0
CiPaw.10G164500 Carya illinoinensis HOM05D000751 ORTHO05D000889 4.7e-14 83.6 413 26.4
CAN.G5.22 Capsicum annuum HOM05D000751 ORTHO05D000889 6.1e-14 83.2 401 27.4
MELO3C025212.2 Cucumis melo HOM05D000751 ORTHO05D000889 6.1e-14 83.2 407 29.5
FAN05G0807 Fragaria x ananassa HOM05D000751 ORTHO05D000889 6.1e-14 83.2 466 24.9
Gohir.D02G004400 Gossypium hirsutum HOM05D000751 ORTHO05D000889 7.9e-14 82.8 401 27.2
Cfa017054 Carpinus fangiana HOM05D000751 ORTHO05D000889 1.0e-13 82.4 419 27.0
Prupe.6G291600 Prunus persica HOM05D000751 ORTHO05D000889 1.0e-13 82.4 394 25.9
PGR031G2288 Punica granatum HOM05D000751 ORTHO05D000889 1.0e-13 82.4 392 24.7
vmacro08926 Vaccinium macrocarpon HOM05D000751 ORTHO05D000889 1.0e-13 82.4 383 26.4
CDE12G0085 Ceratophyllum demersum HOM05D000751 ORTHO05D000889 1.4e-13 82.0 384 27.1
FAN02G3208 Fragaria x ananassa HOM05D000751 ORTHO05D000889 1.4e-13 82.0 466 24.9
FAN05G3756 Fragaria x ananassa HOM05D000751 ORTHO05D000889 1.4e-13 82.0 466 24.9
Gorai.005G005000 Gossypium raimondii HOM05D000751 ORTHO05D000889 1.4e-13 82.0 396 26.8
TWI53G1535 Tripterygium wilfordii HOM05D000751 ORTHO05D000889 1.4e-13 82.0 393 28.5
Lalb_Chr10g0103781 Lupinus albus HOM05D000751 ORTHO05D000889 1.8e-13 81.6 351 28.2
Thecc.04G153800 Theobroma cacao HOM05D000751 ORTHO05D000889 2.3e-13 81.3 396 26.5
AL5G32060 Arabidopsis lyrata HOM05D000751 ORTHO05D000889 3.9e-13 80.5 435 25.3
ClCG04G006390 Citrullus lanatus HOM05D000751 ORTHO05D000889 6.7e-13 79.7 408 26.2
Sed0006675 Sechium edule HOM05D000751 ORTHO05D000889 6.7e-13 79.7 413 26.4
TAR633G1193 Trochodendron aralioides HOM05D000751 ORTHO05D000889 6.7e-13 79.7 444 27.0
Dinv25326 Davidia involucrata HOM05D000751 ORTHO05D000889 8.8e-13 79.3 437 27.2
PSO339G3673 Papaver somniferum HOM05D000751 ORTHO05D000889 1.1e-12 79.0 366 26.5
RcHm_v2.0_Chr3g0460811 Rosa chinensis HOM05D000751 ORTHO05D000889 1.5e-12 78.6 462 25.3
Nn5g26870 Nelumbo nucifera HOM05D000751 ORTHO05D000889 2.0e-12 78.2 417 26.1
AT3G51620 Arabidopsis thaliana HOM05D000751 ORTHO05D000889 3.3e-12 77.4 378 27.2
Aqoxy2G00716 Aquilegia oxysepala HOM05D000751 ORTHO05D000889 4.4e-12 77.0 416 28.1
CANSAT35G1451 Cannabis sativa HOM05D000751 ORTHO05D000889 4.4e-12 77.0 388 26.5
Cc06_g00480 Coffea canephora HOM05D000751 ORTHO05D000889 4.4e-12 77.0 372 27.2
Gohir.A02G004100 Gossypium hirsutum HOM05D000751 ORTHO05D000889 5.7e-12 76.6 399 26.6
Sopen06g033860 Solanum pennellii HOM05D000751 ORTHO05D000889 5.7e-12 76.6 370 27.8
Carub.0005s1798 Capsella rubella HOM05D000751 ORTHO05D000889 9.7e-12 75.9 386 25.4
Hma1.2p1_1052F.1_g252300 Hydrangea macrophylla HOM05D000751 ORTHO05D000889 1.3e-11 75.5 383 25.8
MD04G1172800 Malus domestica HOM05D000751 ORTHO05D000889 1.3e-11 75.5 422 25.1
PSO384G3107 Papaver somniferum HOM05D000751 ORTHO05D000889 1.7e-11 75.1 362 26.0
Duzib151G0240 Durio zibethinus HOM05D000751 ORTHO05D000889 2.8e-11 74.3 393 25.7
Lalb_Chr04g0251761 Lupinus albus HOM05D000751 ORTHO05D000889 2.8e-11 74.3 347 27.4
TWI74G1085 Tripterygium wilfordii HOM05D000751 ORTHO05D000889 2.8e-11 74.3 410 26.1
DCAR_028912 Daucus carota HOM05D000751 ORTHO05D000889 3.7e-11 73.9 348 28.2
Solyc06g082480.3 Solanum lycopersicum HOM05D000751 ORTHO05D000889 3.7e-11 73.9 370 27.6
Ca_05703_v3 Cicer arietinum L. HOM05D000751 ORTHO05D000889 4.8e-11 73.6 358 26.8
Lalb_Chr17g0345611 Lupinus albus HOM05D000751 ORTHO05D000889 6.3e-11 73.2 346 27.2
Actinidia29041 Actinidia chinensis HOM05D000751 ORTHO05D000889 8.2e-11 72.8 376 28.5
Dinv11375 Davidia involucrata HOM05D000751 ORTHO05D000889 8.2e-11 72.8 417 27.3
Gohir.A02G004000 Gossypium hirsutum HOM05D000751 ORTHO05D000889 8.2e-11 72.8 399 25.3
Nitab4.5_0002759g0080 Nicotiana tabacum HOM05D000751 ORTHO05D000889 1.1e-10 72.4 370 25.9
TPR.G25756 Trifolium pratense HOM05D000751 ORTHO05D000889 1.1e-10 72.4 333 27.3
Psat2g051200 Pisum sativum HOM05D000751 ORTHO05D000889 1.4e-10 72.0 354 27.1
GSVIVG01024577001 Vitis vinifera HOM05D000751 ORTHO05D000889 1.8e-10 71.6 372 24.7
Aa31sc296G60 Aethionema arabicum HOM05D000751 ORTHO05D000889 3.1e-10 70.9 379 25.9
Medtr5g075260 Medicago truncatula HOM05D000751 ORTHO05D000889 4.1e-10 70.5 349 28.1
Nitab4.5_0002091g0060 Nicotiana tabacum HOM05D000751 ORTHO05D000889 4.1e-10 70.5 367 27.0
HPP92_019057 Vanilla planifolia HOM05D000751 ORTHO05D000889 4.1e-10 70.5 405 25.2
QL07p032538 Quercus lobata HOM05D000751 ORTHO05D000889 5.3e-10 70.1 420 26.2
Sp5g10650 Schrenkiella parvula HOM05D000751 ORTHO05D000889 7.0e-10 69.7 386 24.6
Solyc09g018160.3 Solanum lycopersicum HOM05D000751 ORTHO05D000889 9.1e-10 69.3 392 24.2
CAN.G404.1 Capsicum annuum HOM05D000751 ORTHO05D000889 1.2e-09 68.9 370 25.9
BcaNung00374 Brassica carinata HOM05D000751 ORTHO05D000889 1.5e-09 68.6 380 23.9
Cc01_g15240 Coffea canephora HOM05D000751 ORTHO05D000889 2.0e-09 68.2 374 26.2
MD12G1186100 Malus domestica HOM05D000751 ORTHO05D000889 2.6e-09 67.8 419 25.5
PGSC0003DMG400030464 Solanum tuberosum HOM05D000751 ORTHO05D000889 2.6e-09 67.8 368 26.9
Peaxi162Scf00390g00325 Petunia axillaris HOM05D000751 ORTHO05D000889 3.5e-09 67.4 374 26.2
VMungo0647G1565 Vigna mungo HOM05D000751 ORTHO05D000889 4.5e-09 67.0 428 25.2
arahy.Tifrunner.gnm1.ann1.LCX1I7 Arachis hypogaea HOM05D000751 ORTHO05D000889 7.7e-09 66.2 355 26.2
Phvul.008G248100 Phaseolus vulgaris HOM05D000751 ORTHO05D000889 7.7e-09 66.2 351 26.8
SalBow5G0723 Salvia bowleyana HOM05D000751 ORTHO05D000889 1.0e-08 65.9 376 25.8
arahy.Tifrunner.gnm1.ann1.G52PLI Arachis hypogaea HOM05D000751 ORTHO05D000889 1.3e-08 65.5 353 25.8
BcaC09g50101 Brassica carinata HOM05D000751 ORTHO05D000889 1.7e-08 65.1 360 24.4
C01p28950 Brassica napus HOM05D000751 ORTHO05D000889 1.7e-08 65.1 360 24.4
Gohir.D02G004500 Gossypium hirsutum HOM05D000751 ORTHO05D000889 3.8e-08 63.9 206 29.1
Sc02g0000860 Simmondsia chinensis HOM05D000751 ORTHO05D000889 3.8e-08 63.9 331 26.6
Sopen09g010800 Solanum pennellii HOM05D000751 ORTHO05D000889 3.8e-08 63.9 392 24.0
Actinidia11516 Actinidia chinensis HOM05D000751 ORTHO05D000889 5.0e-08 63.5 54 55.6
Thhalv10010169m.g Eutrema salsugineum HOM05D000751 ORTHO05D000889 5.0e-08 63.5 369 24.7
SalBow5G1146 Salvia bowleyana HOM05D000751 ORTHO05D000889 5.0e-08 63.5 376 25.5
BolC1t02826H Brassica oleracea HOM05D000751 ORTHO05D000889 6.5e-08 63.2 360 24.2
vmacro02885 Vaccinium macrocarpon HOM05D000751 ORTHO05D000889 6.5e-08 63.2 386 26.7
Glyma.14G203800 Glycine max HOM05D000751 ORTHO05D000889 8.5e-08 62.8 338 26.0
CARHR161210 Cardamine hirsuta HOM05D000751 ORTHO05D000889 1.1e-07 62.4 342 24.3
Eucgr.A00717 Eucalyptus grandis HOM05D000751 ORTHO05D000889 1.1e-07 62.4 375 25.3
TWI77G0574 Tripterygium wilfordii HOM05D000751 ORTHO05D000889 1.1e-07 62.4 56 53.6
QL01p025054 Quercus lobata HOM05D000751 ORTHO05D000889 1.5e-07 62.0 400 23.5
HPP92_015430 Vanilla planifolia HOM05D000751 ORTHO05D000889 1.5e-07 62.0 349 25.2
Hma1.2p1_0119F.1_g056900 Hydrangea macrophylla HOM05D000751 ORTHO05D000889 2.5e-07 61.2 341 22.6
Sabra13G0124800 Salix brachista HOM05D000751 ORTHO05D000889 2.5e-07 61.2 345 26.7
Rhsim01G0242400 Rhododendron simsii HOM05D000751 ORTHO05D000889 4.2e-07 60.5 364 26.1
Sc07g0005870 Simmondsia chinensis HOM05D000751 ORTHO05D000889 9.4e-07 59.3 359 25.9
vmacro14635 Vaccinium macrocarpon HOM05D000751 ORTHO05D000889 9.4e-07 59.3 348 27.0
LjContig00141g0016337 Lotus japonicus HOM05D000751 ORTHO05D000889 1.2e-06 58.9 332 26.5
Actinidia23844 Actinidia chinensis HOM05D000751 ORTHO05D000889 1.6e-06 58.5 314 24.5
ATR0681G301 Amborella trichopoda HOM05D000751 ORTHO05D000889 1.6e-06 58.5 48 56.2
CSS0006115 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D000889 4.7e-06 57.0 290 23.8
Actinidia20786 Actinidia chinensis HOM05D000751 ORTHO05D000889 6.1e-06 56.6 125 33.6
Ah.15g090140 Amaranthus hybridus HOM05D000751 ORTHO05D000889 6.1e-06 56.6 97 39.2
EL10Ac7g17072 Beta vulgaris HOM05D000751 ORTHO05D000889 6.1e-06 56.6 51 52.9
A01p23310 Brassica napus HOM05D000751 ORTHO05D000889 6.1e-06 56.6 351 24.8
AUR62006371 Chenopodium quinoa HOM05D000751 ORTHO05D000889 6.1e-06 56.6 48 54.2
AUR62029704 Chenopodium quinoa HOM05D000751 ORTHO05D000889 6.1e-06 56.6 48 54.2
Hund03727 Selenicereus undatus HOM05D000751 ORTHO05D000889 6.1e-06 56.6 51 51.0
BraA01t02240Z Brassica rapa HOM05D000751 ORTHO05D000889 8.0e-06 56.2 351 25.1


User provided reference genes

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