Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3203 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 2.5e-136 488.8 247 100.0
CDE06G2351 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 5.1e-134 481.1 247 98.4
Thecc.06G233900 Theobroma cacao HOM05D003856 ORTHO05D004547 1.4e-123 446.4 245 91.8
Actinidia02310 Actinidia chinensis HOM05D003856 ORTHO05D004547 2.4e-123 445.7 247 90.7
Ciclev10016420m.g Citrus clementina HOM05D003856 ORTHO05D004547 2.4e-123 445.7 245 91.4
TAR626G0303 Trochodendron aralioides HOM05D003856 ORTHO05D004547 4.1e-123 444.9 247 90.3
Duzib235G1167 Durio zibethinus HOM05D003856 ORTHO05D004547 5.3e-123 444.5 245 91.8
Actinidia26855 Actinidia chinensis HOM05D003856 ORTHO05D004547 6.9e-123 444.1 247 91.1
Aqoxy1G04060 Aquilegia oxysepala HOM05D003856 ORTHO05D004547 6.9e-123 444.1 245 90.6
Lj2A261T38 Lonicera japonica HOM05D003856 ORTHO05D004547 6.9e-123 444.1 247 89.5
Gohir.D10G008800 Gossypium hirsutum HOM05D003856 ORTHO05D004547 1.5e-122 443.0 247 90.7
Gorai.011G009600 Gossypium raimondii HOM05D003856 ORTHO05D004547 1.5e-122 443.0 247 90.7
Duzib192G0794 Durio zibethinus HOM05D003856 ORTHO05D004547 2.0e-122 442.6 245 91.0
Atru.chr1.2436 Acer truncatum HOM05D003856 ORTHO05D004547 2.6e-122 442.2 246 91.1
Atru.chr1.2438 Acer truncatum HOM05D003856 ORTHO05D004547 2.6e-122 442.2 246 91.1
Cpa.g.sc75.112 Carica papaya HOM05D003856 ORTHO05D004547 2.6e-122 442.2 247 89.9
Dinv07408 Davidia involucrata HOM05D003856 ORTHO05D004547 2.6e-122 442.2 245 89.4
Gohir.A10G009100 Gossypium hirsutum HOM05D003856 ORTHO05D004547 2.6e-122 442.2 247 90.7
Nn1g07399 Nelumbo nucifera HOM05D003856 ORTHO05D004547 2.6e-122 442.2 245 89.8
Sc17g0007760 Simmondsia chinensis HOM05D003856 ORTHO05D004547 2.6e-122 442.2 245 89.8
MBI16_g31714_MAGBIO Magnolia biondii HOM05D003856 ORTHO05D004547 3.4e-122 441.8 247 88.3
Gohir.D10G008700 Gossypium hirsutum HOM05D003856 ORTHO05D004547 4.5e-122 441.4 247 89.9
Gorai.011G009500 Gossypium raimondii HOM05D003856 ORTHO05D004547 4.5e-122 441.4 247 89.9
Gohir.A10G009000 Gossypium hirsutum HOM05D003856 ORTHO05D004547 7.7e-122 440.7 247 89.5
Hma1.2p1_0657F.1_g197110 Hydrangea macrophylla HOM05D003856 ORTHO05D004547 7.7e-122 440.7 247 88.7
Potri.016G013100 Populus trichocarpa HOM05D003856 ORTHO05D004547 1.0e-121 440.3 247 88.7
Nitab4.5_0004406g0030 Nicotiana tabacum HOM05D003856 ORTHO05D004547 1.3e-121 439.9 245 89.0
SalBow8G1854 Salvia bowleyana HOM05D003856 ORTHO05D004547 1.7e-121 439.5 245 87.3
CiPaw.10G078300 Carya illinoinensis HOM05D003856 ORTHO05D004547 2.2e-121 439.1 245 89.0
Migut.M01400 Erythranthe guttata HOM05D003856 ORTHO05D004547 2.2e-121 439.1 247 87.0
CSS0032798 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 2.9e-121 438.7 247 89.1
Hund06997 Selenicereus undatus HOM05D003856 ORTHO05D004547 2.9e-121 438.7 245 89.0
Lsat_1_v5_gn_4_61900 Lactuca sativa HOM05D003856 ORTHO05D004547 3.8e-121 438.3 247 87.4
Haze_06930 Corylus avellana HOM05D003856 ORTHO05D004547 5.0e-121 438.0 247 88.3
ECA248G1273 Erigeron canadensis HOM05D003856 ORTHO05D004547 5.0e-121 438.0 247 87.9
FvH4_3g00930 Fragaria vesca HOM05D003856 ORTHO05D004547 5.0e-121 438.0 245 88.6
FAN25G1896 Fragaria x ananassa HOM05D003856 ORTHO05D004547 5.0e-121 438.0 245 88.6
TAR627G0499 Trochodendron aralioides HOM05D003856 ORTHO05D004547 5.0e-121 438.0 247 88.7
TAR627G1166 Trochodendron aralioides HOM05D003856 ORTHO05D004547 5.0e-121 438.0 247 88.7
PGR004G0563 Punica granatum HOM05D003856 ORTHO05D004547 6.5e-121 437.6 245 89.0
VMungo0540G0895 Vigna mungo HOM05D003856 ORTHO05D004547 6.5e-121 437.6 247 88.3
CiPaw.09G102800 Carya illinoinensis HOM05D003856 ORTHO05D004547 8.5e-121 437.2 245 88.2
Lj5g0025471 Lotus japonicus HOM05D003856 ORTHO05D004547 1.1e-120 436.8 247 88.3
RcHm_v2.0_Chr5g0001451 Rosa chinensis HOM05D003856 ORTHO05D004547 1.1e-120 436.8 245 89.0
Sed0026067 Sechium edule HOM05D003856 ORTHO05D004547 1.1e-120 436.8 247 87.4
ClCG01G010160 Citrullus lanatus HOM05D003856 ORTHO05D004547 1.4e-120 436.4 247 87.0
CsaV3_1G017260 Cucumis sativus L. HOM05D003856 ORTHO05D004547 1.4e-120 436.4 247 87.4
HanXRQChr01g0006771 Helianthus annuus HOM05D003856 ORTHO05D004547 1.4e-120 436.4 243 88.9
Manes.08G069500 Manihot esculenta HOM05D003856 ORTHO05D004547 1.4e-120 436.4 247 88.7
TWI38G2230 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 1.4e-120 436.4 248 88.7
CANSAT56G3590 Cannabis sativa HOM05D003856 ORTHO05D004547 1.9e-120 436.0 245 88.6
Cfa010272 Carpinus fangiana HOM05D003856 ORTHO05D004547 1.9e-120 436.0 247 87.4
QL05p069616 Quercus lobata HOM05D003856 ORTHO05D004547 1.9e-120 436.0 245 88.6
BcaC01g00774 Brassica carinata HOM05D003856 ORTHO05D004547 2.5e-120 435.6 245 88.6
A08p15680 Brassica napus HOM05D003856 ORTHO05D004547 2.5e-120 435.6 245 88.6
Eucgr.D01412 Eucalyptus grandis HOM05D003856 ORTHO05D004547 2.5e-120 435.6 245 88.2
Phvul.006G059000 Phaseolus vulgaris HOM05D003856 ORTHO05D004547 2.5e-120 435.6 247 88.3
THA.LOC104812995 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 2.5e-120 435.6 247 88.7
THA.LOC104813601 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 2.5e-120 435.6 245 89.4
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 3.2e-120 435.3 245 89.4
Ah.14g087610 Amaranthus hybridus HOM05D003856 ORTHO05D004547 4.2e-120 434.9 245 88.6
Glyma.08G331200 Glycine max HOM05D003856 ORTHO05D004547 4.2e-120 434.9 247 87.4
Prupe.4G009900 Prunus persica HOM05D003856 ORTHO05D004547 4.2e-120 434.9 244 88.5
SalBow1G0666 Salvia bowleyana HOM05D003856 ORTHO05D004547 4.2e-120 434.9 245 86.9
MSTRG.7166 Avicennia marina HOM05D003856 ORTHO05D004547 5.5e-120 434.5 247 86.6
C03p84130 Brassica napus HOM05D003856 ORTHO05D004547 5.5e-120 434.5 245 88.2
BolC3t20692H Brassica oleracea HOM05D003856 ORTHO05D004547 5.5e-120 434.5 245 88.2
C01p16660 Brassica napus HOM05D003856 ORTHO05D004547 7.2e-120 434.1 245 87.8
BraA08t33548Z Brassica rapa HOM05D003856 ORTHO05D004547 7.2e-120 434.1 245 88.2
Sed0028227 Sechium edule HOM05D003856 ORTHO05D004547 7.2e-120 434.1 247 87.4
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 9.4e-120 433.7 247 87.0
arahy.Tifrunner.gnm1.ann1.ZZ9Q5Y Arachis hypogaea HOM05D003856 ORTHO05D004547 9.4e-120 433.7 247 87.0
EL10Ac8g20193 Beta vulgaris HOM05D003856 ORTHO05D004547 9.4e-120 433.7 244 88.5
Glyma.18G075400 Glycine max HOM05D003856 ORTHO05D004547 9.4e-120 433.7 244 88.5
arahy.Tifrunner.gnm1.ann1.GCV40F Arachis hypogaea HOM05D003856 ORTHO05D004547 1.2e-119 433.3 247 87.0
BolC1t01613H Brassica oleracea HOM05D003856 ORTHO05D004547 1.2e-119 433.3 245 87.8
MD05G1358200 Malus domestica HOM05D003856 ORTHO05D004547 1.2e-119 433.3 244 88.5
arahy.Tifrunner.gnm1.ann1.D1JSNC Arachis hypogaea HOM05D003856 ORTHO05D004547 1.6e-119 433.0 247 86.6
A01p13750 Brassica napus HOM05D003856 ORTHO05D004547 1.6e-119 433.0 245 87.8
BraA01t01320Z Brassica rapa HOM05D003856 ORTHO05D004547 1.6e-119 433.0 245 87.8
AL6G47550 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 2.1e-119 432.6 245 87.8
AL7G31210 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 2.1e-119 432.6 245 87.8
AT4G12590 Arabidopsis thaliana HOM05D003856 ORTHO05D004547 2.1e-119 432.6 245 87.8
BcaB03g11729 Brassica carinata HOM05D003856 ORTHO05D004547 2.1e-119 432.6 245 88.2
Lsat_1_v5_gn_0_29081 Lactuca sativa HOM05D003856 ORTHO05D004547 2.1e-119 432.6 247 86.2
Potri.006G011500 Populus trichocarpa HOM05D003856 ORTHO05D004547 2.1e-119 432.6 247 86.6
Cc09_g00840 Coffea canephora HOM05D003856 ORTHO05D004547 2.7e-119 432.2 248 87.9
FAN21G0260 Fragaria x ananassa HOM05D003856 ORTHO05D004547 3.6e-119 431.8 250 86.8
HanXRQChr10g0285161 Helianthus annuus HOM05D003856 ORTHO05D004547 3.6e-119 431.8 243 86.8
MD10G1332300 Malus domestica HOM05D003856 ORTHO05D004547 3.6e-119 431.8 244 88.1
A09p26760 Brassica napus HOM05D003856 ORTHO05D004547 4.6e-119 431.4 245 87.8
C09p33910 Brassica napus HOM05D003856 ORTHO05D004547 4.6e-119 431.4 245 87.8
BolC9t56227H Brassica oleracea HOM05D003856 ORTHO05D004547 4.6e-119 431.4 245 87.8
BraA09t38248Z Brassica rapa HOM05D003856 ORTHO05D004547 4.6e-119 431.4 245 87.8
CAN.G449.18 Capsicum annuum HOM05D003856 ORTHO05D004547 6.1e-119 431.0 246 87.8
Sopen05g032590 Solanum pennellii HOM05D003856 ORTHO05D004547 6.1e-119 431.0 246 87.8
PGSC0003DMG400008443 Solanum tuberosum HOM05D003856 ORTHO05D004547 6.1e-119 431.0 246 87.8
Aa31LG9G10060 Aethionema arabicum HOM05D003856 ORTHO05D004547 1.0e-118 430.3 245 86.5
Carub.0006s3186 Capsella rubella HOM05D003856 ORTHO05D004547 1.0e-118 430.3 245 87.3
Solyc05g054100.3 Solanum lycopersicum HOM05D003856 ORTHO05D004547 1.4e-118 429.9 246 87.8
SGA_v2.0_scaffold4G01871 Striga asiatica HOM05D003856 ORTHO05D004547 1.4e-118 429.9 244 86.1
BcaC04g21245 Brassica carinata HOM05D003856 ORTHO05D004547 1.8e-118 429.5 245 87.3
Sp7g20520 Schrenkiella parvula HOM05D003856 ORTHO05D004547 2.3e-118 429.1 245 86.9
Thhalv10026090m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 3.0e-118 428.7 245 87.8
BcaB01g01755 Brassica carinata HOM05D003856 ORTHO05D004547 3.9e-118 428.3 245 86.9
Lalb_Chr02g0149201 Lupinus albus HOM05D003856 ORTHO05D004547 6.7e-118 427.6 247 86.2
Ca_10008_v3 Cicer arietinum L. HOM05D003856 ORTHO05D004547 8.8e-118 427.2 248 85.9
CARHR229320 Cardamine hirsuta HOM05D003856 ORTHO05D004547 1.5e-117 426.4 246 87.4
Lalb_Chr06g0168331 Lupinus albus HOM05D003856 ORTHO05D004547 1.5e-117 426.4 245 86.1
Psat6g143120 Pisum sativum HOM05D003856 ORTHO05D004547 3.3e-117 425.2 248 85.5
BcaC09g51102 Brassica carinata HOM05D003856 ORTHO05D004547 4.3e-117 424.9 246 86.6
Sp6g04920 Schrenkiella parvula HOM05D003856 ORTHO05D004547 5.7e-117 424.5 245 86.1
CARHR253580 Cardamine hirsuta HOM05D003856 ORTHO05D004547 2.2e-116 422.5 245 86.5
Thhalv10028913m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 2.8e-116 422.2 245 86.1
PSO541G3298 Papaver somniferum HOM05D003856 ORTHO05D004547 2.8e-116 422.2 248 86.7
Medtr1g079890 Medicago truncatula HOM05D003856 ORTHO05D004547 3.7e-116 421.8 248 84.3
Nitab4.5_0001735g0170 Nicotiana tabacum HOM05D003856 ORTHO05D004547 8.2e-116 420.6 246 87.4
PSO675G7111 Papaver somniferum HOM05D003856 ORTHO05D004547 8.2e-116 420.6 248 86.3
Rhsim02G0099500 Rhododendron simsii HOM05D003856 ORTHO05D004547 8.2e-116 420.6 269 80.7
DCAR_027821 Daucus carota HOM05D003856 ORTHO05D004547 1.4e-115 419.9 286 76.9
Nn1g03306 Nelumbo nucifera HOM05D003856 ORTHO05D004547 1.4e-115 419.9 234 89.3
Oeu009395.1 Olea europaea HOM05D003856 ORTHO05D004547 1.4e-115 419.9 306 72.2
TPR.G32278 Trifolium pratense HOM05D003856 ORTHO05D004547 1.4e-115 419.9 248 84.3
unitig_61.g26092 Utricularia gibba HOM05D003856 ORTHO05D004547 9.1e-115 417.2 260 82.3
TWI63G1684 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 5.9e-114 414.5 290 75.5
Peaxi162Scf00990g00017 Petunia axillaris HOM05D003856 ORTHO05D004547 9.4e-112 407.1 247 83.4
Zm00001eb102120 Zea mays HOM05D003856 ORTHO05D004547 1.2e-111 406.8 249 81.9
AagrBONN_evm.TU.Sc2ySwM_362.305 Anthoceros agrestis HOM05D003856 ORTHO05D004547 6.7e-110 401.0 245 80.8
Os09g0497400 Oryza sativa ssp. japonica HOM05D003856 ORTHO05D004547 7.4e-109 397.5 249 79.9
Mapoly0029s0061 Marchantia polymorpha HOM05D003856 ORTHO05D004547 1.8e-107 392.9 251 77.7
Sabra06G0009100 Salix brachista HOM05D003856 ORTHO05D004547 9.1e-107 390.6 334 64.1
Pp3c11_24600 Physcomitrium patens HOM05D003856 ORTHO05D004547 1.5e-106 389.8 251 76.9
SMO239G0047 Selaginella moellendorffii HOM05D003856 ORTHO05D004547 2.0e-106 389.4 253 75.5
Pp3c7_950 Physcomitrium patens HOM05D003856 ORTHO05D004547 1.7e-105 386.3 251 76.1
Sabra16G0002300 Salix brachista HOM05D003856 ORTHO05D004547 5.0e-105 384.8 227 86.3
Haze_06937 Corylus avellana HOM05D003856 ORTHO05D004547 1.5e-104 383.3 266 75.9
GSVIVG01003331001 Vitis vinifera HOM05D003856 ORTHO05D004547 2.1e-103 379.4 211 88.2
GSVIVG01003337001 Vitis vinifera HOM05D003856 ORTHO05D004547 2.1e-103 379.4 211 88.2
ATR0712G091 Amborella trichopoda HOM05D003856 ORTHO05D004547 2.0e-101 372.9 213 87.8
vmacro15762 Vaccinium macrocarpon HOM05D003856 ORTHO05D004547 2.6e-98 362.5 359 57.9
SHI24455 Sapria himalayana HOM05D003856 ORTHO05D004547 4.5e-90 335.1 245 71.4
Gorai.013G129800 Gossypium raimondii HOM05D003856 ORTHO05D004547 5.5e-88 328.2 247 71.7
Nitab4.5_0003626g0020 Nicotiana tabacum HOM05D003856 ORTHO05D004547 8.0e-87 324.3 245 71.0
Lj1C1240G8 Lonicera japonica HOM05D003856 ORTHO05D004547 1.2e-85 320.5 198 85.4
MELO3C021687.2 Cucumis melo HOM05D003856 ORTHO05D004547 4.2e-80 302.0 179 86.0
CSS0048239 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 7.2e-80 301.2 165 90.3
AUR62021855 Chenopodium quinoa HOM05D003856 ORTHO05D004547 3.6e-79 298.9 172 89.0
AUR62012797 Chenopodium quinoa HOM05D003856 ORTHO05D004547 6.1e-79 298.1 172 89.0
Lalb_Chr21g0311231 Lupinus albus HOM05D003856 ORTHO05D004547 8.0e-79 297.7 166 88.0
HPP92_000415 Vanilla planifolia HOM05D003856 ORTHO05D004547 3.4e-69 265.8 278 54.7
MCO07G661 Micromonas commoda HOM05D003856 ORTHO05D004547 1.8e-62 243.4 241 49.8
SEGI_40422 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 8.6e-57 224.6 138 81.9
Haze_26609 Corylus avellana HOM05D003856 ORTHO05D004547 1.7e-49 200.3 232 44.0
Cre09.g400400 Chlamydomonas reinhardtii HOM05D003856 ORTHO05D004547 3.1e-46 189.5 246 43.5
Gorai.012G047500 Gossypium raimondii HOM05D003856 ORTHO05D004547 1.5e-45 187.2 247 49.0
MD10G1332200 Malus domestica HOM05D003856 ORTHO05D004547 1.9e-40 170.2 102 82.4
SEGI_31097 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 7.3e-40 168.3 94 87.2
Carub.0007s1888 Capsella rubella HOM05D003856 ORTHO05D004547 3.1e-38 162.9 208 52.4
CSS0021523 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.6e-34 150.6 165 54.5
COL.COLO4_31891 Corchorus olitorius HOM05D003856 ORTHO05D004547 8.1e-31 138.3 139 54.7
Lalb_Chr21g0311241 Lupinus albus HOM05D003856 ORTHO05D004547 3.8e-28 129.4 82 78.0
C01p16690 Brassica napus HOM05D003856 ORTHO05D004547 3.2e-27 126.3 83 75.9
Carub.0008s0836 Capsella rubella HOM05D003856 ORTHO05D004547 2.5e-24 116.7 212 42.5
CARHR290760 Cardamine hirsuta HOM05D003856 ORTHO05D004547 3.3e-24 116.3 83 71.1
AL649U10020 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 5.6e-24 115.5 82 75.6
PRCOL_00006309 Prasinoderma coloniale HOM05D003856 ORTHO05D004547 1.1e-22 111.3 229 34.9
CBR_g38137 Chara braunii HOM05D003856 ORTHO05D004547 1.4e-19 100.9 99 48.5
COL.COLO4_31890 Corchorus olitorius HOM05D003856 ORTHO05D004547 7.4e-16 88.6 53 90.6
Migut.L00276 Erythranthe guttata HOM05D003856 ORTHO05D004547 4.8e-15 85.9 51 76.5
Hund21152 Selenicereus undatus HOM05D003856 ORTHO05D004547 1.1e-14 84.7 46 80.4
HPP92_000455 Vanilla planifolia HOM05D003856 ORTHO05D004547 2.6e-13 80.1 51 84.3
Oeu040759.1 Olea europaea HOM05D003856 ORTHO05D004547 5.9e-13 79.0 52 86.5
Dinv13969 Davidia involucrata HOM05D003856 ORTHO05D004547 3.8e-12 76.3 79 55.7
vmacro04321 Vaccinium macrocarpon HOM05D004428 ORTHO05D013648 3.2e-11 73.2 74 56.8
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 7.2e-11 72.0 38 86.8
Rhsim07G0218800 Rhododendron simsii HOM05D003856 ORTHO05D013648 1.1e-08 64.7 90 50.0
vmacro16921 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 1.9e-08 63.9 106 43.4
FAN07G2353 Fragaria x ananassa HOM05D003856 ORTHO05D004547 5.7e-08 62.4 44 79.5
A05p11440 Brassica napus HOM05D003856 ORTHO05D004547 6.3e-07 58.9 34 73.5
BraA05t20093Z Brassica rapa HOM05D003856 ORTHO05D004547 6.3e-07 58.9 34 73.5
C04p14930 Brassica napus HOM05D003856 ORTHO05D004547 1.8e-06 57.4 34 70.6


User provided reference genes

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