Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3202 Ceratophyllum demersum HOM05D000104 ORTHO05D043893 1.3e-79 299.7 152 100.0
Nn1g06879 Nelumbo nucifera HOM05D000104 ORTHO05D008568 1.6e-45 186.4 150 66.7
TAR362G0397 Trochodendron aralioides HOM05D000104 ORTHO05D008568 2.8e-42 175.6 146 63.0
Hund09608 Selenicereus undatus HOM05D000104 ORTHO05D008568 8.2e-42 174.1 136 66.9
TAR633G1665 Trochodendron aralioides HOM05D000104 ORTHO05D008568 7.0e-41 171.0 146 62.3
CiPaw.03G266400 Carya illinoinensis HOM05D000104 ORTHO05D008568 4.5e-40 168.3 147 63.9
EL10As5g23480 Beta vulgaris HOM05D000104 ORTHO05D008568 1.3e-39 166.8 138 63.8
Ah.02g112060 Amaranthus hybridus HOM05D000104 ORTHO05D008568 1.7e-39 166.4 140 64.3
MSTRG.12529 Avicennia marina HOM05D000104 ORTHO05D008568 2.2e-39 166.0 146 60.3
PSO210G7140 Papaver somniferum HOM05D000104 ORTHO05D008568 2.2e-39 166.0 146 63.0
Hma1.2p1_0576F.1_g181920 Hydrangea macrophylla HOM05D000104 ORTHO05D008568 5.0e-39 164.9 145 62.8
Actinidia07307 Actinidia chinensis HOM05D000104 ORTHO05D008568 1.1e-38 163.7 148 58.1
arahy.Tifrunner.gnm1.ann1.Y72JU7 Arachis hypogaea HOM05D000104 ORTHO05D008568 3.2e-38 162.2 142 61.3
AUR62011855 Chenopodium quinoa HOM05D000104 ORTHO05D008568 3.2e-38 162.2 137 62.0
QL09p039652 Quercus lobata HOM05D000104 ORTHO05D008568 5.5e-38 161.4 144 58.3
AUR62024700 Chenopodium quinoa HOM05D000104 ORTHO05D008568 7.2e-38 161.0 137 61.3
arahy.Tifrunner.gnm1.ann1.37VRS2 Arachis hypogaea HOM05D000104 ORTHO05D008568 9.4e-38 160.6 143 60.1
CAN.G1855.3 Capsicum annuum HOM05D000104 ORTHO05D008568 9.4e-38 160.6 148 56.8
CsaV3_3G022110 Cucumis sativus L. HOM05D000104 ORTHO05D008568 1.2e-37 160.2 148 60.1
TWI12G0577 Tripterygium wilfordii HOM05D000104 ORTHO05D008568 2.1e-37 159.5 150 60.0
Ca_09670_v3 Cicer arietinum L. HOM05D000104 ORTHO05D008568 2.7e-37 159.1 140 60.7
ClCG00G001480 Citrullus lanatus HOM05D000104 ORTHO05D008568 2.7e-37 159.1 144 59.7
ClCG07G001160 Citrullus lanatus HOM05D000104 ORTHO05D008568 2.7e-37 159.1 144 59.7
Glyma.13G124600 Glycine max HOM05D000104 ORTHO05D008568 3.6e-37 158.7 139 61.9
MELO3C012868.2 Cucumis melo HOM05D000104 ORTHO05D008568 4.7e-37 158.3 147 60.5
Lalb_Chr02g0152571 Lupinus albus HOM05D000104 ORTHO05D008568 6.1e-37 157.9 143 61.5
Cc01_g18180 Coffea canephora HOM05D000104 ORTHO05D008568 8.0e-37 157.5 144 58.3
FAN27G2543 Fragaria x ananassa HOM05D000104 ORTHO05D008568 1.0e-36 157.1 147 56.5
FAN20G0134 Fragaria x ananassa HOM05D000104 ORTHO05D008568 3.0e-36 155.6 147 55.8
MD05G1194600 Malus domestica HOM05D000104 ORTHO05D008568 3.0e-36 155.6 146 56.8
vmacro02676 Vaccinium macrocarpon HOM05D000104 ORTHO05D008568 3.0e-36 155.6 140 57.9
Psat6g061320 Pisum sativum HOM05D000104 ORTHO05D008568 4.0e-36 155.2 140 57.9
Sopen09g028210 Solanum pennellii HOM05D000104 ORTHO05D008568 4.0e-36 155.2 139 58.3
Cpa.g.sc165.16 Carica papaya HOM05D000104 ORTHO05D008568 5.2e-36 154.8 149 59.7
PGSC0003DMG400010292 Solanum tuberosum HOM05D000104 ORTHO05D008568 5.2e-36 154.8 139 57.6
VMungo0720G2644 Vigna mungo HOM05D000104 ORTHO05D008568 5.2e-36 154.8 136 61.8
Peaxi162Scf00624g00319 Petunia axillaris HOM05D000104 ORTHO05D008568 6.7e-36 154.5 144 55.6
COL.COLO4_04021 Corchorus olitorius HOM05D000104 ORTHO05D008568 8.8e-36 154.1 140 57.1
Gorai.004G221400 Gossypium raimondii HOM05D000104 ORTHO05D008568 8.8e-36 154.1 140 56.4
SalBow6G2605 Salvia bowleyana HOM05D000104 ORTHO05D008568 8.8e-36 154.1 152 53.9
Sed0001144 Sechium edule HOM05D000104 ORTHO05D008568 8.8e-36 154.1 135 59.3
Duzib138G0599 Durio zibethinus HOM05D000104 ORTHO05D008568 1.5e-35 153.3 133 60.9
FAN15G3096 Fragaria x ananassa HOM05D000104 ORTHO05D008568 1.5e-35 153.3 147 55.1
FAN24G3224 Fragaria x ananassa HOM05D000104 ORTHO05D008568 2.0e-35 152.9 147 53.1
Lj1C69T5 Lonicera japonica HOM05D000104 ORTHO05D008568 2.0e-35 152.9 142 56.3
Lj5g0019569 Lotus japonicus HOM05D000104 ORTHO05D008568 2.0e-35 152.9 142 59.2
Thecc.01G255700 Theobroma cacao HOM05D000104 ORTHO05D008568 2.0e-35 152.9 142 57.7
Glyma.10G038200 Glycine max HOM05D000104 ORTHO05D043893 2.6e-35 152.5 138 60.9
Rhsim13G0036300 Rhododendron simsii HOM05D000104 ORTHO05D008568 2.6e-35 152.5 140 57.1
Sabra05G0174900 Salix brachista HOM05D000104 ORTHO05D008568 2.6e-35 152.5 143 57.3
Prupe.8G221300 Prunus persica HOM05D000104 ORTHO05D008568 3.3e-35 152.1 145 55.2
FvH4_2g21200 Fragaria vesca HOM05D000104 ORTHO05D008568 4.4e-35 151.8 147 52.4
Gohir.D08G209100 Gossypium hirsutum HOM05D000104 ORTHO05D008568 5.7e-35 151.4 152 53.3
DCAR_018495 Daucus carota HOM05D000104 ORTHO05D008568 7.5e-35 151.0 147 56.5
Gohir.A08G191100 Gossypium hirsutum HOM05D000104 ORTHO05D008568 9.7e-35 150.6 152 53.3
Manes.13G035800 Manihot esculenta HOM05D000104 ORTHO05D008568 9.7e-35 150.6 146 58.2
Medtr1g069755 Medicago truncatula HOM05D000104 ORTHO05D008568 1.3e-34 150.2 138 57.2
PGR044G2555 Punica granatum HOM05D000104 ORTHO05D008568 1.3e-34 150.2 138 59.4
Nitab4.5_0007062g0050 Nicotiana tabacum HOM05D000104 ORTHO05D008568 1.7e-34 149.8 138 57.2
Phvul.007G191600 Phaseolus vulgaris HOM05D000104 ORTHO05D008568 1.7e-34 149.8 138 58.7
ECA247G0422 Erigeron canadensis HOM05D000104 ORTHO05D008568 2.8e-34 149.1 139 54.7
SGA_v2.0_scaffold42G16196 Striga asiatica HOM05D000104 ORTHO05D008568 3.7e-34 148.7 140 60.7
MBI07_g16902_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D008568 4.8e-34 148.3 146 54.8
TPR.G5864 Trifolium pratense HOM05D000104 ORTHO05D008568 4.8e-34 148.3 139 54.7
CANSAT01G0880 Cannabis sativa HOM05D000104 ORTHO05D008568 6.3e-34 147.9 146 57.5
RcHm_v2.0_Chr6g0287701 Rosa chinensis HOM05D000104 ORTHO05D008568 8.2e-34 147.5 143 55.2
Ciclev10018548m.g Citrus clementina HOM05D000104 ORTHO05D008568 1.6e-32 143.3 146 52.1
ATR0736G017 Amborella trichopoda HOM05D000104 ORTHO05D008568 2.0e-32 142.9 154 50.6
Migut.N02212 Erythranthe guttata HOM05D000104 ORTHO05D008568 4.5e-32 141.7 144 53.5
HanXRQChr10g0280821 Helianthus annuus HOM05D000104 ORTHO05D008568 4.5e-32 141.7 147 53.7
Lsat_1_v5_gn_9_10521 Lactuca sativa HOM05D000104 ORTHO05D008568 7.7e-32 141.0 141 56.0
Os01g0102800 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D008568 1.0e-31 140.6 145 54.5
HPP92_009781 Vanilla planifolia HOM05D000104 ORTHO05D008568 1.0e-31 140.6 142 52.1
Cfa002445 Carpinus fangiana HOM05D000104 ORTHO05D008568 1.3e-31 140.2 182 47.8
Haze_24651 Corylus avellana HOM05D000104 ORTHO05D008568 1.7e-31 139.8 182 48.4
SEGI_32379 Sequoiadendron giganteum HOM05D000104 ORTHO05D008568 2.9e-31 139.0 149 53.7
Zm00001eb127010 Zea mays HOM05D000104 ORTHO05D008568 6.5e-31 137.9 139 53.2
unitig_46.g18342 Utricularia gibba HOM05D000104 ORTHO05D008568 9.4e-30 134.0 149 47.0
Aqoxy2G03678 Aquilegia oxysepala HOM05D000104 ORTHO05D008568 1.2e-29 133.7 146 50.7
THA.LOC104804044 Tarenaya hassleriana HOM05D000104 ORTHO05D008568 4.7e-29 131.7 135 50.4
C07p56300 Brassica napus HOM05D000104 ORTHO05D008568 6.1e-29 131.3 147 46.9
BolC7t46109H Brassica oleracea HOM05D000104 ORTHO05D008568 8.0e-29 131.0 147 46.9
BraA03t14890Z Brassica rapa HOM05D000104 ORTHO05D008568 1.4e-28 130.2 147 46.3
Aa31LG2G21880 Aethionema arabicum HOM05D000104 ORTHO05D008568 3.0e-28 129.0 139 50.4
BcaC06g32613 Brassica carinata HOM05D000104 ORTHO05D008568 5.2e-28 128.3 147 46.3
A03p58270 Brassica napus HOM05D000104 ORTHO05D008568 6.8e-28 127.9 147 45.6
GSVIVG01028359001 Vitis vinifera HOM05D000104 ORTHO05D008568 2.0e-27 126.3 84 73.8
SHI09765 Sapria himalayana HOM05D000104 ORTHO05D008568 9.8e-27 124.0 148 50.0
Carub.0003s3303 Capsella rubella HOM05D000104 ORTHO05D008568 8.3e-26 120.9 135 48.1
AT2G18760 Arabidopsis thaliana HOM05D000104 ORTHO05D008568 2.4e-25 119.4 135 48.1
Eucgr.K03253 Eucalyptus grandis HOM05D000104 ORTHO05D008568 1.2e-24 117.1 124 52.4
AL3G53180 Arabidopsis lyrata HOM05D000104 ORTHO05D008568 4.5e-24 115.2 135 45.9
Pp3c15_23590 Physcomitrium patens HOM05D000104 ORTHO05D008568 4.5e-24 115.2 136 47.1
CARHR109360 Cardamine hirsuta HOM05D000104 ORTHO05D008568 7.7e-24 114.4 135 45.2
Thhalv10022523m.g Eutrema salsugineum HOM05D000104 ORTHO05D008568 2.2e-23 112.8 135 45.9
Oeu039673.1 Olea europaea HOM05D000104 ORTHO05D008568 3.8e-23 112.1 68 77.9
CBR_g39569 Chara braunii HOM05D000104 ORTHO05D008568 2.9e-15 85.9 141 35.5
Atru.chr5.1731 Acer truncatum HOM05D000104 ORTHO05D008568 6.6e-15 84.7 101 48.5
AagrBONN_evm.TU.Sc2ySwM_117.1591 Anthoceros agrestis HOM05D000104 ORTHO05D008568 6.6e-15 84.7 135 35.6
SMO011G0002 Selaginella moellendorffii HOM05D000104 ORTHO05D008568 2.0e-08 63.2 127 34.6
Mapoly0036s0084 Marchantia polymorpha HOM05D000104 ORTHO05D008568 3.9e-07 58.9 82 40.2
Cre06.g270850 Chlamydomonas reinhardtii HOM05D000104 ORTHO05D008568 5.6e-06 55.1 69 34.8


User provided reference genes

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