Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3158 Ceratophyllum demersum HOM05D000726 ORTHO05D007554 0.0e+00 1940.2 996 100.0
TAR376G0399 Trochodendron aralioides HOM05D000726 ORTHO05D007554 4.0e-270 935.3 1253 45.9
Nn4g25316 Nelumbo nucifera HOM05D000726 ORTHO05D007554 3.4e-261 905.6 1217 45.4
CSS0015479 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 1.2e-253 880.6 1233 43.9
CSS0022432 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 1.1e-246 857.4 1233 43.1
Atru.chr3.177 Acer truncatum HOM05D000726 ORTHO05D007554 1.2e-245 854.0 1212 43.2
Manes.13G112300 Manihot esculenta HOM05D000726 ORTHO05D007554 4.4e-245 852.0 1246 42.8
Haze_15292 Corylus avellana HOM05D000726 ORTHO05D007554 2.9e-244 849.4 1251 42.8
Aqoxy6G02647 Aquilegia oxysepala HOM05D000726 ORTHO05D007554 2.4e-243 846.3 1217 42.9
Cfa004123 Carpinus fangiana HOM05D000726 ORTHO05D007554 4.2e-243 845.5 1251 42.7
Potri.007G055400 Populus trichocarpa HOM05D000726 ORTHO05D007554 1.3e-241 840.5 1199 43.3
vmacro05404 Vaccinium macrocarpon HOM05D000726 ORTHO05D007554 2.8e-239 832.8 1249 41.7
TWI09G1290 Tripterygium wilfordii HOM05D000726 ORTHO05D007554 4.0e-238 828.9 1246 42.0
Nitab4.5_0001417g0030 Nicotiana tabacum HOM05D000726 ORTHO05D007554 3.8e-236 822.4 1223 41.7
Actinidia36435 Actinidia chinensis HOM05D000726 ORTHO05D007554 2.1e-234 816.6 1225 41.2
ClCG01G017520 Citrullus lanatus HOM05D000726 ORTHO05D007554 3.5e-234 815.8 1223 42.7
Gorai.007G222900 Gossypium raimondii HOM05D000726 ORTHO05D007554 1.0e-233 814.3 1228 40.8
Gohir.D11G207900 Gossypium hirsutum HOM05D000726 ORTHO05D007554 5.1e-233 812.0 1228 40.6
arahy.Tifrunner.gnm1.ann1.6361M0 Arachis hypogaea HOM05D000726 ORTHO05D007554 2.5e-232 809.7 1197 41.8
CANSAT01G3261 Cannabis sativa HOM05D000726 ORTHO05D007554 3.3e-232 809.3 1255 41.9
QL06p039670 Quercus lobata HOM05D000726 ORTHO05D007554 4.3e-232 808.9 1251 41.2
Ciclev10024730m.g Citrus clementina HOM05D000726 ORTHO05D007554 1.3e-231 807.4 1251 40.7
Nitab4.5_0006813g0010 Nicotiana tabacum HOM05D000726 ORTHO05D007554 4.8e-231 805.4 1222 41.3
Gohir.A11G215400 Gossypium hirsutum HOM05D000726 ORTHO05D007554 8.1e-231 804.7 1228 40.4
PSO675G6338 Papaver somniferum HOM05D000726 ORTHO05D007554 8.1e-231 804.7 1237 41.6
HanXRQChr12g0373111 Helianthus annuus HOM05D000726 ORTHO05D007554 1.8e-230 803.5 1202 39.5
arahy.Tifrunner.gnm1.ann1.1ZHU8Z Arachis hypogaea HOM05D000726 ORTHO05D007554 5.3e-230 802.0 1222 41.1
FAN05G3645 Fragaria x ananassa HOM05D000726 ORTHO05D007554 1.5e-229 800.4 1243 41.2
PGSC0003DMG400009094 Solanum tuberosum HOM05D000726 ORTHO05D007554 1.5e-229 800.4 1198 41.4
PSO541G0636 Papaver somniferum HOM05D000726 ORTHO05D007554 5.8e-229 798.5 1237 41.3
Sopen03g007820 Solanum pennellii HOM05D000726 ORTHO05D007554 5.8e-229 798.5 1209 40.9
CsaV3_6G044070 Cucumis sativus L. HOM05D000726 ORTHO05D007554 1.3e-228 797.3 1223 41.7
Duzib147G0272 Durio zibethinus HOM05D000726 ORTHO05D007554 1.3e-228 797.3 1230 41.2
MSTRG.23676 Avicennia marina HOM05D000726 ORTHO05D007554 2.9e-228 796.2 1215 41.2
Solyc03g044020.4 Solanum lycopersicum HOM05D000726 ORTHO05D007554 2.9e-228 796.2 1211 40.7
Sed0012994 Sechium edule HOM05D000726 ORTHO05D007554 8.4e-228 794.7 1225 41.4
Medtr5g015600 Medicago truncatula HOM05D000726 ORTHO05D007554 2.4e-227 793.1 1261 40.3
MD02G1184600 Malus domestica HOM05D000726 ORTHO05D007554 4.2e-227 792.3 1229 40.3
PGR102G1358 Punica granatum HOM05D000726 ORTHO05D007554 3.5e-226 789.3 1224 40.9
Eucgr.H02305 Eucalyptus grandis HOM05D000726 ORTHO05D007554 7.9e-226 788.1 1228 40.0
MELO3C007629.2 Cucumis melo HOM05D000726 ORTHO05D007554 1.0e-225 787.7 1231 41.0
Atru.BG.105.p Acer truncatum HOM05D000726 ORTHO05D007554 5.1e-225 785.4 1042 44.6
Lsat_1_v5_gn_4_160781 Lactuca sativa HOM05D000726 ORTHO05D007554 6.7e-225 785.0 1194 39.4
Psat2g171280 Pisum sativum HOM05D000726 ORTHO05D007554 6.7e-225 785.0 1221 40.9
Phvul.002G011500 Phaseolus vulgaris HOM05D000726 ORTHO05D007554 1.1e-224 784.3 1248 39.7
CAN.G278.12 Capsicum annuum HOM05D000726 ORTHO05D007554 1.5e-224 783.9 1208 39.8
Glyma.01G193500 Glycine max HOM05D000726 ORTHO05D007554 3.3e-224 782.7 1234 40.4
Thecc.01G071800 Theobroma cacao HOM05D000726 ORTHO05D007554 3.3e-224 782.7 958 46.5
Ca_24700_v3 Cicer arietinum L. HOM05D000726 ORTHO05D007554 5.6e-224 781.9 1248 40.0
Sc03g0002340 Simmondsia chinensis HOM05D000726 ORTHO05D007554 2.8e-223 779.6 1236 40.0
FvH4_6g31560 Fragaria vesca HOM05D000726 ORTHO05D007554 6.2e-223 778.5 1241 40.6
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 6.2e-223 778.5 1163 41.6
Peaxi162Scf00118g01929 Petunia axillaris HOM05D000726 ORTHO05D007554 3.1e-222 776.2 1229 39.2
Sabra07G0047700 Salix brachista HOM05D000726 ORTHO05D007554 3.1e-222 776.2 799 52.4
Migut.H00354 Erythranthe guttata HOM05D000726 ORTHO05D007554 4.0e-222 775.8 1191 41.6
TPR.G34847 Trifolium pratense HOM05D000726 ORTHO05D007554 4.0e-222 775.8 1230 40.6
RcHm_v2.0_Chr2g0138631 Rosa chinensis HOM05D000726 ORTHO05D007554 9.0e-222 774.6 1249 40.0
VMungo1215G2083 Vigna mungo HOM05D000726 ORTHO05D007554 2.0e-221 773.5 1235 39.6
AUR62003999 Chenopodium quinoa HOM05D000726 ORTHO05D007554 2.2e-220 770.0 1205 41.2
FAN14G0573 Fragaria x ananassa HOM05D000726 ORTHO05D007554 8.4e-220 768.1 1242 39.9
Cpa.g.sc6.26 Carica papaya HOM05D000726 ORTHO05D007554 1.1e-219 767.7 763 54.1
Lj2g0006912 Lotus japonicus HOM05D000726 ORTHO05D007554 1.4e-219 767.3 1252 39.3
EL10Ac6g15628 Beta vulgaris HOM05D000726 ORTHO05D007554 4.2e-219 765.8 1251 39.3
Hund16395 Selenicereus undatus HOM05D000726 ORTHO05D007554 9.3e-219 764.6 1234 40.0
THA.LOC104819266 Tarenaya hassleriana HOM05D000726 ORTHO05D007554 3.5e-218 762.7 1241 39.4
Ah.03g140460 Amaranthus hybridus HOM05D000726 ORTHO05D007554 7.9e-218 761.5 1240 39.6
Cc07_g07020 Coffea canephora HOM05D000726 ORTHO05D007554 1.1e-216 757.7 1226 40.3
ECA232G2303 Erigeron canadensis HOM05D000726 ORTHO05D007554 1.1e-216 757.7 1171 39.9
COL.COLO4_11566 Corchorus olitorius HOM05D000726 ORTHO05D007554 1.9e-216 756.9 1199 41.1
Lalb_Chr09g0323571 Lupinus albus HOM05D000726 ORTHO05D007554 3.3e-216 756.1 1186 39.7
Prupe.6G221900 Prunus persica HOM05D000726 ORTHO05D007554 4.1e-214 749.2 762 52.2
Thhalv10000018m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 2.6e-213 746.5 1196 38.9
AT1G64960 Arabidopsis thaliana HOM05D000726 ORTHO05D007554 7.7e-213 745.0 1203 39.4
CARHR056360 Cardamine hirsuta HOM05D000726 ORTHO05D007554 6.5e-212 741.9 1226 38.7
FAN02G1686 Fragaria x ananassa HOM05D000726 ORTHO05D007554 1.1e-211 741.1 1188 40.3
AL2G19510 Arabidopsis lyrata HOM05D000726 ORTHO05D007554 1.2e-210 737.6 1236 38.0
Thhalv10023223m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 1.0e-209 734.6 1220 38.2
DCAR_010826 Daucus carota HOM05D000726 ORTHO05D007554 2.0e-208 730.3 1221 39.1
Aa31LG2G2150 Aethionema arabicum HOM05D000726 ORTHO05D007554 3.3e-208 729.6 1210 37.4
SHI31766 Sapria himalayana HOM05D000726 ORTHO05D007554 4.5e-205 719.2 1204 38.5
SGA_v2.0_scaffold15G07449 Striga asiatica HOM05D000726 ORTHO05D007554 4.5e-205 719.2 1264 37.8
Lj7A95G20 Lonicera japonica HOM05D000726 ORTHO05D007554 1.3e-204 717.6 1199 39.3
Sp5g19220 Schrenkiella parvula HOM05D000726 ORTHO05D007554 1.1e-203 714.5 1236 36.8
FAN09G4729 Fragaria x ananassa HOM05D000726 ORTHO05D007554 1.3e-199 701.0 1143 40.1
ATR0208G028 Amborella trichopoda HOM05D000726 ORTHO05D007554 3.1e-198 696.4 809 48.0
C06p38860 Brassica napus HOM05D000726 ORTHO05D007554 4.7e-194 682.6 1229 36.4
BolC6t38979H Brassica oleracea HOM05D000726 ORTHO05D007554 1.1e-192 677.9 1229 36.4
unitig_0.g505 Utricularia gibba HOM05D000726 ORTHO05D007554 4.1e-190 669.5 1075 39.7
BraA07t30892Z Brassica rapa HOM05D000726 ORTHO05D007554 1.2e-189 667.9 1108 38.0
BcaB03g15339 Brassica carinata HOM05D000726 ORTHO05D007554 1.5e-187 661.0 1228 35.7
Thhalv10001287m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 2.8e-183 646.7 1180 35.7
A07p32680 Brassica napus HOM05D000726 ORTHO05D007554 3.0e-177 626.7 729 47.3
Dinv26921 Davidia involucrata HOM05D000726 ORTHO05D007554 4.8e-175 619.4 977 40.4
GSVIVG01000124001 Vitis vinifera HOM05D000726 ORTHO05D007554 2.3e-164 583.9 777 46.1
SEGI_06920 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 1.1e-163 581.6 736 42.7
Zm00001eb051460 Zea mays HOM05D000726 ORTHO05D007554 8.0e-162 575.5 1076 36.0
HPP92_014039 Vanilla planifolia HOM05D000726 ORTHO05D007554 1.4e-161 574.7 573 55.1
Thhalv10006613m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 1.5e-160 571.2 1188 34.0
Carub.0002s1010 Capsella rubella HOM05D000726 ORTHO05D007554 2.0e-160 570.9 1000 36.3
Os03g0616500 Oryza sativa ssp. japonica HOM05D000726 ORTHO05D007554 4.4e-152 543.1 648 45.8
AUR62040247 Chenopodium quinoa HOM05D000726 ORTHO05D007554 4.3e-147 526.6 905 38.9
Mapoly0045s0033 Marchantia polymorpha HOM05D000726 ORTHO05D007554 4.0e-145 520.0 785 38.7
SMO364G0657 Selaginella moellendorffii HOM05D000726 ORTHO05D007554 1.2e-141 508.4 779 39.9
AagrBONN_evm.TU.Sc2ySwM_117.495 Anthoceros agrestis HOM05D000726 ORTHO05D007554 6.0e-141 506.1 654 43.6
SalBow3G2688 Salvia bowleyana HOM05D000726 ORTHO05D007554 1.0e-116 425.6 859 34.9
SEGI_38739 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 8.1e-114 416.0 413 49.4
CiPaw.01G005400 Carya illinoinensis HOM05D000726 ORTHO05D007554 2.3e-108 397.9 433 53.8
HPP92_028352 Vanilla planifolia HOM05D000726 ORTHO05D007554 1.5e-107 395.2 540 42.6
Oeu003558.1 Olea europaea HOM05D000726 ORTHO05D007554 1.2e-88 332.4 370 51.4
Sabra16G0084600 Salix brachista HOM05D000726 ORTHO05D007554 1.7e-79 302.0 363 47.9
Sabra11G0056500 Salix brachista HOM05D000726 ORTHO05D007554 1.5e-78 298.9 354 48.6
Sabra11G0026400 Salix brachista HOM05D000726 ORTHO05D007554 1.9e-78 298.5 352 48.6
Glyma.11G048432 Glycine max HOM05D000726 ORTHO05D007554 4.5e-72 277.3 236 61.4
PRCOL_00006071 Prasinoderma coloniale HOM05D000726 ORTHO05D007554 5.0e-71 273.9 455 34.3
Cre06.g262800 Chlamydomonas reinhardtii HOM05D000726 ORTHO05D007554 2.0e-59 235.3 439 33.3
CBR_g29418 Chara braunii HOM05D000019 ORTHO05D000002 2.9e-47 194.9 338 33.7
SEGI_24863 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 4.7e-45 187.6 289 38.1
RcHm_v2.0_Chr2g0138441 Rosa chinensis HOM05D000726 ORTHO05D007554 1.4e-33 149.4 186 46.2
Cpa.g.sc6.25 Carica papaya HOM05D000726 ORTHO05D007554 5.6e-30 137.5 342 34.5
CiPaw.01G005300 Carya illinoinensis HOM05D000726 ORTHO05D007554 1.1e-28 133.3 245 38.0
HPP92_014040 Vanilla planifolia HOM05D000726 ORTHO05D007554 1.8e-28 132.5 639 23.3
Glyma.11G048366 Glycine max HOM05D000726 ORTHO05D007554 8.6e-23 113.6 203 36.9
ATR0208G027 Amborella trichopoda HOM05D000726 ORTHO05D007554 7.6e-19 100.5 310 31.0
Nn1g04578 Nelumbo nucifera HOM05D000726 ORTHO05D007554 1.2e-11 76.6 85 50.6
Lj7C94G0 Lonicera japonica HOM05D000726 ORTHO05D007554 9.3e-09 67.0 186 28.5
SEGI_23696 Sequoiadendron giganteum HOM05D000726 ORTHO05D000001 1.6e-08 66.2 213 30.0
Nn1g04577 Nelumbo nucifera HOM05D000726 ORTHO05D007554 4.6e-08 64.7 100 34.0
Psat3g174680 Pisum sativum HOM05D000726 ORTHO05D025659 7.9e-08 63.9 100 30.0
Psat3g172760 Pisum sativum HOM05D000726 ORTHO05D025659 6.6e-07 60.8 100 30.0
Psat3g174600 Pisum sativum HOM05D000726 ORTHO05D025659 1.1e-06 60.1 100 30.0
HPP92_028353 Vanilla planifolia HOM05D000726 ORTHO05D007554 3.3e-06 58.5 114 40.4


User provided reference genes

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