Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.3e-112 409.8 215 100.0
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 3.8e-77 292.0 171 89.5
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 2.7e-22 109.8 154 45.5
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 1.7e-21 107.1 170 44.1
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 3.9e-21 105.9 148 43.9
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 6.6e-21 105.1 147 43.5
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 3.3e-20 102.8 152 46.1
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.6e-19 100.5 158 46.2
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.6e-19 100.5 158 46.2
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.6e-19 100.5 149 43.6
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 2.1e-19 100.1 171 41.5
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 4.8e-19 99.0 146 41.8
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 6.2e-19 98.6 169 42.0
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 6.2e-19 98.6 169 42.0
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 8.1e-19 98.2 172 42.4
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 1.1e-18 97.8 149 40.3
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.1e-18 97.8 152 43.4
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 1.4e-18 97.4 153 44.4
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 1.4e-18 97.4 151 41.1
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 1.4e-18 97.4 162 38.9
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 1.4e-18 97.4 155 43.9
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.8e-18 97.1 153 40.5
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.4e-18 96.7 172 43.0
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 3.1e-18 96.3 153 42.5
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.3e-18 95.5 153 41.2
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 6.9e-18 95.1 158 38.6
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 9.0e-18 94.7 153 41.2
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.2e-17 94.4 148 41.2
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.2e-17 94.4 165 41.2
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 1.2e-17 94.4 152 43.4
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.2e-17 94.4 153 43.1
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.5e-17 94.0 161 39.8
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 1.5e-17 94.0 167 38.9
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 2.0e-17 93.6 166 42.2
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 3.4e-17 92.8 156 40.4
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.4e-17 92.8 169 40.2
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 4.5e-17 92.4 137 46.7
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.8e-17 92.0 153 39.9
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 1.3e-16 90.9 147 41.5
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.3e-16 90.9 169 39.6
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 1.7e-16 90.5 162 42.0
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 1.7e-16 90.5 160 38.1
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 2.2e-16 90.1 151 41.1
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.2e-16 90.1 151 39.1
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 2.9e-16 89.7 175 38.9
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 3.8e-16 89.4 164 40.2
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 3.8e-16 89.4 162 38.3
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 4.9e-16 89.0 150 39.3
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 4.9e-16 89.0 164 40.2
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 6.4e-16 88.6 164 39.6
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 8.4e-16 88.2 174 39.7
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 1.1e-15 87.8 160 40.0
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.9e-15 87.0 158 39.2
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 2.4e-15 86.7 109 45.9
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 2.4e-15 86.7 158 39.2
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 5.4e-15 85.5 179 34.1
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 7.1e-15 85.1 145 38.6
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 7.1e-15 85.1 150 38.0
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 7.1e-15 85.1 142 42.3
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 9.3e-15 84.7 182 38.5
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 9.3e-15 84.7 152 40.1
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 9.3e-15 84.7 155 40.0
AT2G43060 Arabidopsis thaliana HOM05D005211 ORTHO05D006148 1.6e-14 84.0 152 42.1
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 2.1e-14 83.6 181 36.5
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 2.1e-14 83.6 162 38.3
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 2.7e-14 83.2 151 38.4
HPP92_023344 Vanilla planifolia HOM05D005211 ORTHO05D006148 3.5e-14 82.8 147 40.1
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 4.6e-14 82.4 152 39.5
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 6.0e-14 82.0 137 43.1
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 6.0e-14 82.0 168 35.7
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 6.0e-14 82.0 147 42.9
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 7.9e-14 81.6 145 40.0
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 1.0e-13 81.3 156 39.1
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 1.0e-13 81.3 168 34.5
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 1.0e-13 81.3 169 37.3
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 1.0e-13 81.3 149 38.9
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 1.3e-13 80.9 147 40.8
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.3e-13 80.9 177 37.9
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 1.3e-13 80.9 150 37.3
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 1.8e-13 80.5 177 32.8
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 2.3e-13 80.1 172 32.6
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 3.9e-13 79.3 156 37.2
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 3.9e-13 79.3 177 36.2
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 5.1e-13 79.0 131 41.2
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 5.1e-13 79.0 150 34.0
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 6.7e-13 78.6 108 46.3
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 6.7e-13 78.6 154 39.6
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 8.7e-13 78.2 152 38.8
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 8.7e-13 78.2 134 40.3
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 1.1e-12 77.8 177 35.6
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 1.5e-12 77.4 173 32.9
Thhalv10017615m.g Eutrema salsugineum HOM05D005211 ORTHO05D006148 1.9e-12 77.0 145 37.9
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 1.9e-12 77.0 168 32.1
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 3.3e-12 76.3 156 36.5
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 3.3e-12 76.3 140 40.7
BcaNung03535 Brassica carinata HOM05D005211 ORTHO05D006148 5.6e-12 75.5 149 36.2
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 5.6e-12 75.5 143 38.5
BNapus_Darmor_BZH_scaffold_64p00090 Brassica napus HOM05D005211 ORTHO05D006148 1.3e-11 74.3 148 38.5
BraA04t18707Z Brassica rapa HOM05D005211 ORTHO05D006148 1.3e-11 74.3 148 38.5
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 2.8e-11 73.2 150 35.3
THA.LOC104802290 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 2.8e-11 73.2 157 38.9
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 3.6e-11 72.8 144 36.1
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 4.8e-11 72.4 147 36.7
BcaB06g29284 Brassica carinata HOM05D005211 ORTHO05D006148 8.1e-11 71.6 148 35.8
BcaB06g29285 Brassica carinata HOM05D005211 ORTHO05D006148 8.1e-11 71.6 148 35.8
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 1.1e-10 71.2 143 37.1
HanXRQChr01g0007251 Helianthus annuus HOM05D005211 ORTHO05D006148 1.1e-10 71.2 164 37.8
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 1.1e-10 71.2 118 40.7
MSTRG.18497 Avicennia marina HOM05D005211 ORTHO05D006148 1.4e-10 70.9 149 36.9
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 1.8e-10 70.5 116 44.0
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 6.9e-10 68.6 157 36.3
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 6.9e-10 68.6 113 41.6
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 9.0e-10 68.2 176 33.0
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 1.2e-09 67.8 141 36.9
A05p03550 Brassica napus HOM05D005211 ORTHO05D006148 2.6e-09 66.6 144 33.3
BraA05t19341Z Brassica rapa HOM05D005211 ORTHO05D006148 2.6e-09 66.6 144 33.3
Ah.11g050990 Amaranthus hybridus HOM05D005211 ORTHO05D006148 3.4e-09 66.2 119 37.0
C04p04120 Brassica napus HOM05D005211 ORTHO05D006148 5.8e-09 65.5 147 34.0
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 5.8e-09 65.5 102 39.2
BcaC02g12418 Brassica carinata HOM05D005211 ORTHO05D006148 1.3e-08 64.3 147 32.7
BolC4t22051H Brassica oleracea HOM05D005211 ORTHO05D006148 1.3e-08 64.3 147 32.7
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 1.7e-08 63.9 110 39.1
THA.LOC104803428 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 2.2e-08 63.5 161 32.3
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 2.9e-08 63.2 150 34.0
Gohir.A07G159000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 8.4e-08 61.6 136 36.8
unitig_52.g17443 Utricularia gibba HOM05D005211 ORTHO05D006148 1.1e-07 61.2 146 32.9
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 1.4e-07 60.8 93 41.9
C04p70060 Brassica napus HOM05D005211 ORTHO05D006148 1.4e-07 60.8 142 34.5
BolC4t28506H Brassica oleracea HOM05D005211 ORTHO05D006148 1.4e-07 60.8 142 34.5
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 1.4e-07 60.8 152 33.6
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 1.4e-07 60.8 116 40.5
Gorai.N002800 Gossypium raimondii HOM05D005211 ORTHO05D006148 1.4e-07 60.8 136 36.0
Os04g0660100 Oryza sativa ssp. japonica HOM05D005211 ORTHO05D006148 2.4e-07 60.1 178 30.3
QL10p006175 Quercus lobata HOM05D000022 ORTHO05D006148 5.5e-07 58.9 108 39.8
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 1.2e-06 57.8 168 32.7
CSS0032639 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 3.5e-06 56.2 59 52.5
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 4.6e-06 55.8 87 37.9
Oeu049588.1 Olea europaea HOM05D005211 ORTHO05D006148 6.0e-06 55.5 102 39.2


User provided reference genes

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