Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3132 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 1.7e-129 466.1 240 100.0
CDE07G0304 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 1.2e-114 416.8 230 92.6
TAR381G0470 Trochodendron aralioides HOM05D008049 ORTHO05D010198 8.4e-33 144.8 289 38.8
CiPaw.03G116500 Carya illinoinensis HOM05D008049 ORTHO05D010198 2.1e-31 140.2 296 36.1
Nn5g28352 Nelumbo nucifera HOM05D008049 ORTHO05D010198 1.3e-30 137.5 293 35.5
Ciclev10002216m.g Citrus clementina HOM05D008049 ORTHO05D010198 3.9e-30 136.0 270 37.0
Dinv30334 Davidia involucrata HOM05D008049 ORTHO05D010198 5.1e-30 135.6 309 33.3
FAN26G0656 Fragaria x ananassa HOM05D008049 ORTHO05D010198 1.5e-29 134.0 271 36.9
FAN26G2415 Fragaria x ananassa HOM05D008049 ORTHO05D010198 1.5e-29 134.0 271 36.9
Atru.chr4.1095 Acer truncatum HOM05D008049 ORTHO05D010198 1.9e-29 133.7 281 35.6
Atru.chr4.1100 Acer truncatum HOM05D008049 ORTHO05D010198 1.9e-29 133.7 281 35.6
Prupe.4G279900 Prunus persica HOM05D008049 ORTHO05D010198 5.7e-29 132.1 293 35.5
FAN19G2909 Fragaria x ananassa HOM05D008049 ORTHO05D010198 1.6e-28 130.6 271 36.5
Hma1.2p1_0134F.1_g061550 Hydrangea macrophylla HOM05D008049 ORTHO05D010198 1.6e-28 130.6 225 38.7
QL10p040433 Quercus lobata HOM05D008049 ORTHO05D010198 1.6e-28 130.6 308 34.1
FvH4_1g25250 Fragaria vesca HOM05D008049 ORTHO05D010198 3.7e-28 129.4 271 36.2
TWI31G1063 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 3.7e-28 129.4 295 33.6
PGR102G0265 Punica granatum HOM05D008049 ORTHO05D010198 4.8e-28 129.0 284 35.2
MD15G1137300 Malus domestica HOM05D008049 ORTHO05D010198 3.1e-27 126.3 286 37.1
Actinidia16520 Actinidia chinensis HOM05D008049 ORTHO05D010198 4.1e-27 125.9 228 36.0
PSO528G0188 Papaver somniferum HOM05D008049 ORTHO05D010198 4.5e-26 122.5 283 36.0
Thecc.01G140900 Theobroma cacao HOM05D008049 ORTHO05D010198 5.9e-26 122.1 222 36.5
PSO170G0957 Papaver somniferum HOM05D008049 ORTHO05D010198 7.6e-26 121.7 282 35.1
A10p28010 Brassica napus HOM05D008049 ORTHO05D010198 1.0e-25 121.3 286 33.2
RcHm_v2.0_Chr2g0123171 Rosa chinensis HOM05D008049 ORTHO05D010198 1.3e-25 120.9 280 33.6
THA.LOC104818414 Tarenaya hassleriana HOM05D008049 ORTHO05D010198 2.2e-25 120.2 219 37.4
TWI79G0517 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 2.2e-25 120.2 295 32.9
Cpa.g.sc37.30 Carica papaya HOM05D008049 ORTHO05D010198 2.9e-25 119.8 290 34.1
Aa31LG3G17800 Aethionema arabicum HOM05D008049 ORTHO05D010198 3.8e-25 119.4 296 33.4
BraA10t44851Z Brassica rapa HOM05D008049 ORTHO05D010198 3.8e-25 119.4 286 32.9
Potri.005G069900 Populus trichocarpa HOM05D008049 ORTHO05D010198 3.8e-25 119.4 290 32.8
BolC9t59570H Brassica oleracea HOM05D008049 ORTHO05D010198 5.0e-25 119.0 289 32.5
CARHR204240 Cardamine hirsuta HOM05D008049 ORTHO05D010198 1.1e-24 117.9 295 33.6
Duzib147G0405 Durio zibethinus HOM05D008049 ORTHO05D010198 1.1e-24 117.9 298 31.5
C09p68210 Brassica napus HOM05D008049 ORTHO05D010198 1.9e-24 117.1 289 32.5
Thhalv10014201m.g Eutrema salsugineum HOM05D008049 ORTHO05D010198 1.9e-24 117.1 304 31.2
DCAR_013179 Daucus carota HOM05D008049 ORTHO05D010198 2.5e-24 116.7 283 32.2
Duzib187G0110 Durio zibethinus HOM05D008049 ORTHO05D010198 5.5e-24 115.5 281 32.4
AL6G19520 Arabidopsis lyrata HOM05D008049 ORTHO05D010198 7.2e-24 115.2 295 32.2
EL10Ac4g09675 Beta vulgaris HOM05D008049 ORTHO05D010198 7.2e-24 115.2 339 30.4
AT5G08770 Arabidopsis thaliana HOM05D008049 ORTHO05D010198 1.2e-23 114.4 296 32.1
Sc09g0002140 Simmondsia chinensis HOM05D008049 ORTHO05D010198 1.6e-23 114.0 335 31.6
Phvul.009G152600 Phaseolus vulgaris HOM05D008049 ORTHO05D010198 3.6e-23 112.8 277 32.9
Glyma.04G208100 Glycine max HOM05D008049 ORTHO05D010198 4.6e-23 112.5 266 32.7
Glyma.06G157600 Glycine max HOM05D008049 ORTHO05D010198 6.1e-23 112.1 268 32.5
Carub.0006s0774 Capsella rubella HOM05D008049 ORTHO05D010198 7.9e-23 111.7 297 32.0
Sp6g34110 Schrenkiella parvula HOM05D008049 ORTHO05D010198 7.9e-23 111.7 305 30.2
Lj1g0009929 Lotus japonicus HOM05D008049 ORTHO05D010198 3.0e-22 109.8 292 31.5
MBI06_g26010_MAGBIO Magnolia biondii HOM05D008049 ORTHO05D010198 3.0e-22 109.8 129 46.5
BcaB08g37227 Brassica carinata HOM05D008049 ORTHO05D010198 3.9e-22 109.4 305 31.1
Medtr3g096940 Medicago truncatula HOM05D008049 ORTHO05D010198 1.1e-21 107.8 275 32.0
arahy.Tifrunner.gnm1.ann1.WZNZ1Z Arachis hypogaea HOM05D008049 ORTHO05D010198 2.5e-21 106.7 302 30.1
Gorai.012G037400 Gossypium raimondii HOM05D008049 ORTHO05D010198 7.4e-21 105.1 228 33.3
Migut.H00830 Erythranthe guttata HOM05D008049 ORTHO05D010198 2.8e-20 103.2 225 33.8
VMungo1309G0538 Vigna mungo HOM05D008049 ORTHO05D010198 3.7e-20 102.8 277 32.5
arahy.Tifrunner.gnm1.ann1.M4SWJY Arachis hypogaea HOM05D008049 ORTHO05D010198 8.2e-20 101.7 299 29.8
AUR62006889 Chenopodium quinoa HOM05D008049 ORTHO05D010198 7.7e-18 95.1 145 42.8
COL.COLO4_12107 Corchorus olitorius HOM05D008049 ORTHO05D010198 1.8e-14 84.0 147 37.4
Nitab4.5_0000905g0120 Nicotiana tabacum HOM05D008049 ORTHO05D010198 1.5e-13 80.9 159 36.5
unitig_899.g15147 Utricularia gibba HOM05D008049 ORTHO05D010198 2.2e-12 77.0 200 32.5
Lalb_Chr08g0238031 Lupinus albus HOM05D008049 ORTHO05D010198 6.3e-12 75.5 205 30.7
MD15G1137000 Malus domestica HOM05D008049 ORTHO05D010198 1.7e-09 67.4 141 37.6
TPR.G7867 Trifolium pratense HOM05D008049 ORTHO05D010198 6.5e-09 65.5 165 29.1
SGA_v2.0_scaffold20G08957 Striga asiatica HOM05D008049 ORTHO05D010198 1.4e-06 57.8 95 34.7
Gohir.D04G033000 Gossypium hirsutum HOM05D008049 ORTHO05D010198 2.3e-06 57.0 188 27.7
AUR62000540 Chenopodium quinoa HOM05D008049 ORTHO05D010198 3.9e-06 56.2 72 44.4


User provided reference genes

Program Settings