Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3060 Ceratophyllum demersum HOM05D003589 ORTHO05D005170 9.0e-221 770.0 404 100.0
CDE04G2629 Ceratophyllum demersum HOM05D003589 ORTHO05D005170 2.5e-194 682.2 387 91.5
MBI15_g01602_MAGBIO Magnolia biondii HOM05D003589 ORTHO05D005170 1.2e-20 105.1 303 33.7
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 1.4e-19 101.7 421 32.1
TAR633G1241 Trochodendron aralioides HOM05D003589 ORTHO05D005170 6.8e-19 99.4 344 31.4
Actinidia20793 Actinidia chinensis HOM05D003589 ORTHO05D005170 8.9e-19 99.0 269 34.9
CSS0028706 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 1.2e-18 98.6 159 45.3
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 2.0e-18 97.8 232 37.1
Nn5g26845 Nelumbo nucifera HOM05D003589 ORTHO05D005170 4.4e-18 96.7 316 32.6
Haze_21177 Corylus avellana HOM05D003589 ORTHO05D005170 9.9e-18 95.5 190 39.5
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 9.9e-18 95.5 261 32.6
Phvul.008G082600 Phaseolus vulgaris HOM05D003589 ORTHO05D005170 1.7e-17 94.7 220 33.2
Thecc.04G151400 Theobroma cacao HOM05D003589 ORTHO05D005170 2.2e-17 94.4 251 35.1
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 6.4e-17 92.8 373 30.3
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 6.4e-17 92.8 224 34.4
MSTRG.5498 Avicennia marina HOM05D003589 ORTHO05D005170 1.9e-16 91.3 267 31.1
Cpa.g.sc86.55 Carica papaya HOM05D003589 ORTHO05D005170 2.4e-16 90.9 149 39.6
Dinv34487 Davidia involucrata HOM05D003589 ORTHO05D005170 1.2e-15 88.6 152 43.4
Gohir.A02G003200 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.6e-15 88.2 324 31.5
arahy.Tifrunner.gnm1.ann1.IRJT2S Arachis hypogaea HOM05D003589 ORTHO05D005170 2.7e-15 87.4 305 27.5
arahy.Tifrunner.gnm1.ann1.US8I5D Arachis hypogaea HOM05D003589 ORTHO05D005170 3.5e-15 87.0 291 28.5
Sopen09g009460 Solanum pennellii HOM05D003589 ORTHO05D005170 3.5e-15 87.0 263 31.2
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 6.0e-15 86.3 209 33.5
Solyc09g015530.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 6.0e-15 86.3 262 30.5
Ah.15g090010 Amaranthus hybridus HOM05D003589 ORTHO05D005170 7.8e-15 85.9 209 31.6
DCAR_028921 Daucus carota HOM05D003589 ORTHO05D005170 1.3e-14 85.1 271 32.1
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 1.3e-14 85.1 145 41.4
Nitab4.5_0004433g0040 Nicotiana tabacum HOM05D003589 ORTHO05D005170 1.7e-14 84.7 260 30.8
PGR142G3587 Punica granatum HOM05D003589 ORTHO05D005170 2.3e-14 84.3 205 34.6
GSVIVG01030180001 Vitis vinifera HOM05D003589 ORTHO05D005170 3.0e-14 84.0 312 30.1
Cfa017032 Carpinus fangiana HOM05D003589 ORTHO05D005170 3.9e-14 83.6 272 29.4
CiPaw.09G221500 Carya illinoinensis HOM05D003589 ORTHO05D005170 3.9e-14 83.6 200 33.5
Gorai.005G004100 Gossypium raimondii HOM05D003589 ORTHO05D005170 3.9e-14 83.6 420 29.5
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 6.6e-14 82.8 235 33.6
Ciclev10032400m.g Citrus clementina HOM05D003589 ORTHO05D005170 8.7e-14 82.4 200 31.0
RcHm_v2.0_Chr3g0460451 Rosa chinensis HOM05D003589 ORTHO05D005170 8.7e-14 82.4 157 39.5
TAR369G0333 Trochodendron aralioides HOM05D003589 ORTHO05D005170 8.7e-14 82.4 287 30.0
PSO170G6362 Papaver somniferum HOM05D003589 ORTHO05D005170 1.5e-13 81.6 232 30.2
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 1.9e-13 81.3 420 28.8
VMungo1383G2329 Vigna mungo HOM05D003589 ORTHO05D005170 2.5e-13 80.9 321 29.0
Peaxi162Scf00732g00259 Petunia axillaris HOM05D003589 ORTHO05D005170 3.3e-13 80.5 215 32.1
Nitab4.5_0000048g0030 Nicotiana tabacum HOM05D003589 ORTHO05D005170 4.3e-13 80.1 293 30.4
Oeu057998.1 Olea europaea HOM05D003589 ORTHO05D005170 5.6e-13 79.7 148 39.9
Ca_02266_v3 Cicer arietinum L. HOM05D003589 ORTHO05D005170 9.6e-13 79.0 153 39.9
Hma1.2p1_0264F.1_g106130 Hydrangea macrophylla HOM05D003589 ORTHO05D005170 9.6e-13 79.0 266 30.1
THA.LOC104806162 Tarenaya hassleriana HOM05D003589 ORTHO05D005170 9.6e-13 79.0 420 27.4
vmacro08941 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 1.6e-12 78.2 298 32.6
FAN02G1320 Fragaria x ananassa HOM05D003589 ORTHO05D005170 2.1e-12 77.8 157 38.2
Gohir.D10G115400 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.8e-12 77.4 376 28.2
Manes.09G118000 Manihot esculenta HOM05D003589 ORTHO05D005170 3.6e-12 77.0 320 29.1
TWI77G0120 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 3.6e-12 77.0 308 26.6
Lalb_Chr01g0023761 Lupinus albus HOM05D003589 ORTHO05D005170 4.7e-12 76.6 223 30.5
Sed0028030 Sechium edule HOM05D003589 ORTHO05D005170 4.7e-12 76.6 150 39.3
Eucgr.G03139 Eucalyptus grandis HOM05D003589 ORTHO05D005170 6.2e-12 76.3 111 45.9
Gorai.011G127100 Gossypium raimondii HOM05D003589 ORTHO05D005170 6.2e-12 76.3 376 27.9
TWI74G0182 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 6.2e-12 76.3 314 29.0
Migut.J00036 Erythranthe guttata HOM05D003589 ORTHO05D005170 8.1e-12 75.9 352 28.4
SGA_v2.0_scaffold85G26610 Striga asiatica HOM05D003589 ORTHO05D005170 8.1e-12 75.9 326 27.9
Glyma.18G213700 Glycine max HOM05D003589 ORTHO05D005170 1.1e-11 75.5 314 28.3
Manes.10G001600 Manihot esculenta HOM05D003589 ORTHO05D005170 1.1e-11 75.5 230 27.4
CSS0030619 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 1.4e-11 75.1 157 38.9
Sed0000653 Sechium edule HOM05D003589 ORTHO05D005170 1.4e-11 75.1 231 33.3
QL07p032102 Quercus lobata HOM05D003589 ORTHO05D005170 1.8e-11 74.7 102 47.1
ECA247G3378 Erigeron canadensis HOM05D000259 ORTHO05D000155 4.0e-11 73.6 137 39.4
FAN09G1607 Fragaria x ananassa HOM05D003589 ORTHO05D005170 5.3e-11 73.2 275 29.5
GSVIVG01032671001 Vitis vinifera HOM05D003589 ORTHO05D005170 5.3e-11 73.2 104 38.5
Gohir.A10G150900 Gossypium hirsutum HOM05D003589 ORTHO05D005170 6.9e-11 72.8 416 27.6
Potri.016G136900 Populus trichocarpa HOM05D003589 ORTHO05D005170 6.9e-11 72.8 158 32.3
ClCG10G022760 Citrullus lanatus HOM05D003589 ORTHO05D005170 9.0e-11 72.4 344 27.6
PGR031G3776 Punica granatum HOM05D003589 ORTHO05D005170 9.0e-11 72.4 228 30.3
Hund03699 Selenicereus undatus HOM05D003589 ORTHO05D005170 1.2e-10 72.0 334 27.5
AUR62029766 Chenopodium quinoa HOM05D003589 ORTHO05D005170 1.5e-10 71.6 202 29.7
DCAR_018039 Daucus carota HOM05D003589 ORTHO05D005170 1.5e-10 71.6 157 36.9
FAN14G2282 Fragaria x ananassa HOM05D003589 ORTHO05D005170 2.0e-10 71.2 323 27.2
Gohir.D02G003600 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.0e-10 71.2 418 27.3
Os05g0478200 Oryza sativa ssp. japonica HOM05D003589 ORTHO05D005170 5.8e-10 69.7 176 29.5
Prupe.6G293800 Prunus persica HOM05D003589 ORTHO05D005170 5.8e-10 69.7 204 29.9
Rhsim04G0121600 Rhododendron simsii HOM05D003589 ORTHO05D005170 9.9e-10 68.9 100 47.0
FvH4_6g09850 Fragaria vesca HOM05D003589 ORTHO05D005170 1.7e-09 68.2 323 26.9
Eucgr.A00727 Eucalyptus grandis HOM05D003589 ORTHO05D005170 2.2e-09 67.8 271 26.2
Rhsim03G0152700 Rhododendron simsii HOM05D003589 ORTHO05D005170 2.2e-09 67.8 151 39.1
Sabra06G0084600 Salix brachista HOM05D003589 ORTHO05D005170 2.2e-09 67.8 148 36.5
vmacro06893 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 2.9e-09 67.4 242 31.0
FAN05G4521 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.8e-09 67.0 271 28.0
Rhsim03G0152300 Rhododendron simsii HOM05D003589 ORTHO05D005170 4.9e-09 66.6 155 38.7
Glyma.09G274700 Glycine max HOM05D003589 ORTHO05D005170 1.1e-08 65.5 324 28.1
CsaV3_6G002320 Cucumis sativus L. HOM05D003589 ORTHO05D005170 1.4e-08 65.1 229 31.9
Oeu060212.1 Olea europaea HOM05D003589 ORTHO05D005170 1.4e-08 65.1 67 49.3
SalBow5G3966 Salvia bowleyana HOM05D003589 ORTHO05D005170 1.9e-08 64.7 363 25.6
Lsat_1_v5_gn_9_38921 Lactuca sativa HOM05D003589 ORTHO05D005170 2.4e-08 64.3 94 40.4
MELO3C020009.2 Cucumis melo HOM05D003589 ORTHO05D005170 5.4e-08 63.2 258 30.6
ClCG11G005660 Citrullus lanatus HOM05D003589 ORTHO05D005170 7.1e-08 62.8 186 30.1
AT3G51580 Arabidopsis thaliana HOM05D003589 ORTHO05D005170 1.6e-07 61.6 413 25.4
HPP92_015592 Vanilla planifolia HOM05D003589 ORTHO05D005170 1.6e-07 61.6 419 27.4
AUR62006418 Chenopodium quinoa HOM05D003589 ORTHO05D005170 2.7e-07 60.8 379 24.0
DCAR_014664 Daucus carota HOM05D003589 ORTHO05D005170 3.5e-07 60.5 188 30.3
SalBow5G5138 Salvia bowleyana HOM05D003589 ORTHO05D005170 4.6e-07 60.1 92 38.0
COL.COLO4_19418 Corchorus olitorius HOM05D003589 ORTHO05D005170 6.0e-07 59.7 117 35.0
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 6.0e-07 59.7 170 28.2
MD12G1188500 Malus domestica HOM05D003589 ORTHO05D005170 7.8e-07 59.3 112 38.4
CANSAT56G1879 Cannabis sativa HOM05D003589 ORTHO05D005170 1.0e-06 58.9 116 39.7
AL5G32020 Arabidopsis lyrata HOM05D003589 ORTHO05D005170 3.0e-06 57.4 409 26.4
Lj1g0021012 Lotus japonicus HOM05D003589 ORTHO05D005170 3.0e-06 57.4 379 25.9
unitig_578.g15914 Utricularia gibba HOM05D003589 ORTHO05D005170 5.1e-06 56.6 401 22.9
Aa31LG1G13800 Aethionema arabicum HOM05D003589 ORTHO05D005170 8.7e-06 55.8 349 25.8
Thecc.10G179400 Theobroma cacao HOM05D003589 ORTHO05D005170 8.7e-06 55.8 169 28.4


User provided reference genes

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