Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3031 Ceratophyllum demersum HOM05D004399 ORTHO05D005303 3.7e-134 481.5 232 100.0
CDE02G0376 Ceratophyllum demersum HOM05D004399 ORTHO05D005303 2.8e-126 455.3 227 95.6
QL03p073920 Quercus lobata HOM05D004399 ORTHO05D005303 1.4e-104 383.3 216 81.5
Nn3g17119 Nelumbo nucifera HOM05D004399 ORTHO05D005303 4.0e-104 381.7 223 78.5
CANSAT11G0637 Cannabis sativa HOM05D004399 ORTHO05D005303 8.8e-104 380.6 219 80.4
COL.COLO4_27864 Corchorus olitorius HOM05D004399 ORTHO05D005303 8.8e-104 380.6 214 81.8
Duzib251G0565 Durio zibethinus HOM05D004399 ORTHO05D005303 8.8e-104 380.6 215 82.3
CSS0044473 Camellia sinensis var. sinensis HOM05D004399 ORTHO05D005303 1.5e-103 379.8 216 80.1
TAR622G1336 Trochodendron aralioides HOM05D004399 ORTHO05D005303 1.5e-103 379.8 216 81.0
HanXRQChr12g0363151 Helianthus annuus HOM05D004399 ORTHO05D005303 2.0e-103 379.4 222 79.7
Dinv34060 Davidia involucrata HOM05D004399 ORTHO05D005303 3.4e-103 378.6 216 79.6
TWI75G0511 Tripterygium wilfordii HOM05D004399 ORTHO05D005303 3.4e-103 378.6 215 80.5
Nn4g24779 Nelumbo nucifera HOM05D004399 ORTHO05D005303 4.4e-103 378.3 225 77.3
CAN.G707.11 Capsicum annuum HOM05D004399 ORTHO05D005303 5.7e-103 377.9 225 76.4
vmacro10433 Vaccinium macrocarpon HOM05D004399 ORTHO05D005303 5.7e-103 377.9 216 81.0
PSO017G5651 Papaver somniferum HOM05D004399 ORTHO05D005303 9.8e-103 377.1 216 80.6
MBI14_g37191_MAGBIO Magnolia biondii HOM05D004399 ORTHO05D005303 1.3e-102 376.7 224 79.0
Manes.05G109300 Manihot esculenta HOM05D004399 ORTHO05D005303 1.3e-102 376.7 216 79.2
Aqoxy4G03091 Aquilegia oxysepala HOM05D004399 ORTHO05D005303 2.2e-102 375.9 213 81.2
Potri.010G157500 Populus trichocarpa HOM05D004399 ORTHO05D005303 2.2e-102 375.9 226 77.0
Prupe.1G288800 Prunus persica HOM05D004399 ORTHO05D005303 2.2e-102 375.9 215 81.4
Aqoxy3G03260 Aquilegia oxysepala HOM05D004399 ORTHO05D005303 3.7e-102 375.2 224 76.8
CiPaw.05G124200 Carya illinoinensis HOM05D004399 ORTHO05D005303 4.8e-102 374.8 216 79.6
PGR083G0959 Punica granatum HOM05D004399 ORTHO05D005303 6.3e-102 374.4 216 80.1
RcHm_v2.0_Chr4g0438081 Rosa chinensis HOM05D004399 ORTHO05D005303 6.3e-102 374.4 228 75.9
Rhsim09G0126300 Rhododendron simsii HOM05D004399 ORTHO05D005303 8.3e-102 374.0 229 76.9
Thecc.02G328800 Theobroma cacao HOM05D004399 ORTHO05D005303 8.3e-102 374.0 215 80.9
CANSAT64G2641 Cannabis sativa HOM05D004399 ORTHO05D005303 1.4e-101 373.2 219 79.5
PSO832G2862 Papaver somniferum HOM05D004399 ORTHO05D005303 1.4e-101 373.2 216 79.6
Peaxi162Scf00175g00428 Petunia axillaris HOM05D004399 ORTHO05D005303 1.4e-101 373.2 225 75.6
ECA233G2368 Erigeron canadensis HOM05D004399 ORTHO05D005303 1.8e-101 372.9 216 79.2
Lj6A777T47 Lonicera japonica HOM05D004399 ORTHO05D005303 1.8e-101 372.9 215 79.5
PGSC0003DMG402028313 Solanum tuberosum HOM05D004399 ORTHO05D005303 1.8e-101 372.9 225 75.6
SGA_v2.0_scaffold16G07803 Striga asiatica HOM05D004399 ORTHO05D005303 1.8e-101 372.9 216 78.2
Zm00001eb433530 Zea mays HOM05D004399 ORTHO05D005303 1.8e-101 372.9 216 79.6
Lsat_1_v5_gn_8_46460 Lactuca sativa HOM05D004399 ORTHO05D005303 2.4e-101 372.5 218 80.7
Lj3C1029T7 Lonicera japonica HOM05D004399 ORTHO05D005303 2.4e-101 372.5 216 78.7
DCAR_024127 Daucus carota HOM05D004399 ORTHO05D005303 3.1e-101 372.1 226 76.5
Cc06_g15640 Coffea canephora HOM05D004399 ORTHO05D005303 5.4e-101 371.3 215 78.1
Hund05832 Selenicereus undatus HOM05D004399 ORTHO05D005303 7.0e-101 370.9 216 79.2
Sopen05g006940 Solanum pennellii HOM05D004399 ORTHO05D005303 7.0e-101 370.9 225 75.6
MSTRG.7738 Avicennia marina HOM05D004399 ORTHO05D005303 9.1e-101 370.5 216 79.2
Cpa.g.sc1.139 Carica papaya HOM05D004399 ORTHO05D005303 9.1e-101 370.5 216 78.7
Nitab4.5_0007061g0010 Nicotiana tabacum HOM05D004399 ORTHO05D005303 9.1e-101 370.5 225 76.9
MD13G1060600 Malus domestica HOM05D004399 ORTHO05D005303 1.2e-100 370.2 215 79.5
Os04g0674200 Oryza sativa ssp. japonica HOM05D004399 ORTHO05D005303 1.2e-100 370.2 216 78.7
Eucgr.B03145 Eucalyptus grandis HOM05D004399 ORTHO05D005303 1.6e-100 369.8 215 80.0
Psat3g063920 Pisum sativum HOM05D004399 ORTHO05D005303 1.6e-100 369.8 216 79.2
Sc11g0002530 Simmondsia chinensis HOM05D004399 ORTHO05D005303 1.6e-100 369.8 216 77.8
Solyc05g012150.4 Solanum lycopersicum HOM05D004399 ORTHO05D005303 1.6e-100 369.8 225 75.1
HanXRQChr08g0211681 Helianthus annuus HOM05D004399 ORTHO05D005303 2.7e-100 369.0 216 78.2
Potri.008G097100 Populus trichocarpa HOM05D004399 ORTHO05D005303 2.7e-100 369.0 226 74.8
Gohir.A03G104700 Gossypium hirsutum HOM05D004399 ORTHO05D005303 3.5e-100 368.6 215 78.6
A06p42990 Brassica napus HOM05D004399 ORTHO05D005303 4.5e-100 368.2 215 79.1
Ciclev10032681m.g Citrus clementina HOM05D004399 ORTHO05D005303 4.5e-100 368.2 216 77.8
CsaV3_6G033760 Cucumis sativus L. HOM05D004399 ORTHO05D005303 5.9e-100 367.9 222 76.1
MELO3C011412.2 Cucumis melo HOM05D004399 ORTHO05D005303 7.7e-100 367.5 222 76.1
BcaC06g31162 Brassica carinata HOM05D004399 ORTHO05D005303 1.0e-99 367.1 215 78.6
C07p34040 Brassica napus HOM05D004399 ORTHO05D005303 1.0e-99 367.1 215 78.6
BolC7t43918H Brassica oleracea HOM05D004399 ORTHO05D005303 1.0e-99 367.1 215 78.6
EL10Ac6g15013 Beta vulgaris HOM05D004399 ORTHO05D005303 1.3e-99 366.7 216 78.7
Ca_08608_v3 Cicer arietinum L. HOM05D004399 ORTHO05D005303 1.3e-99 366.7 216 78.2
FvH4_4g29830 Fragaria vesca HOM05D004399 ORTHO05D005303 1.3e-99 366.7 216 78.2
PSO478G0010 Papaver somniferum HOM05D004399 ORTHO05D005303 1.3e-99 366.7 216 79.6
Os05g0188800 Oryza sativa ssp. japonica HOM05D004399 ORTHO05D005303 1.7e-99 366.3 216 77.8
Migut.L01179 Erythranthe guttata HOM05D004399 ORTHO05D005303 2.3e-99 365.9 216 78.2
DCAR_026680 Daucus carota HOM05D004399 ORTHO05D005303 3.8e-99 365.2 213 79.8
Hma1.2p1_0566F.1_g179870 Hydrangea macrophylla HOM05D004399 ORTHO05D005303 3.8e-99 365.2 216 76.4
Ah.02g126810 Amaranthus hybridus HOM05D004399 ORTHO05D005303 5.0e-99 364.8 216 78.2
Cfa008867 Carpinus fangiana HOM05D004399 ORTHO05D005303 5.0e-99 364.8 216 78.2
FAN22G0874 Fragaria x ananassa HOM05D004399 ORTHO05D005303 5.0e-99 364.8 216 77.3
BcaC06g31172 Brassica carinata HOM05D004399 ORTHO05D005303 6.5e-99 364.4 214 78.0
Ca_25695_v3 Cicer arietinum L. HOM05D004399 ORTHO05D005303 6.5e-99 364.4 216 77.8
Haze_11894 Corylus avellana HOM05D004399 ORTHO05D005303 6.5e-99 364.4 216 77.8
Sp2g14510 Schrenkiella parvula HOM05D004399 ORTHO05D005303 6.5e-99 364.4 215 77.7
Lj1g0019699 Lotus japonicus HOM05D004399 ORTHO05D005303 1.1e-98 363.6 216 77.3
Ah.03g138840 Amaranthus hybridus HOM05D004399 ORTHO05D005303 1.5e-98 363.2 215 77.7
FAN12G0059 Fragaria x ananassa HOM05D004399 ORTHO05D005303 1.5e-98 363.2 216 77.8
FAN17G2847 Fragaria x ananassa HOM05D004399 ORTHO05D005303 1.5e-98 363.2 216 77.3
Carub.0005s0281 Capsella rubella HOM05D004399 ORTHO05D005303 2.5e-98 362.5 215 77.7
Thhalv10004874m.g Eutrema salsugineum HOM05D004399 ORTHO05D005303 2.5e-98 362.5 215 77.7
Sabra08G0073300 Salix brachista HOM05D004399 ORTHO05D005303 2.5e-98 362.5 214 78.0
SalBow4G1206 Salvia bowleyana HOM05D004399 ORTHO05D005303 2.5e-98 362.5 216 76.4
AL5G13480 Arabidopsis lyrata HOM05D004399 ORTHO05D005303 3.2e-98 362.1 215 77.7
arahy.Tifrunner.gnm1.ann1.E76E6E Arachis hypogaea HOM05D004399 ORTHO05D005303 3.2e-98 362.1 216 76.9
BcaB07g30287 Brassica carinata HOM05D004399 ORTHO05D005303 3.2e-98 362.1 215 77.7
arahy.Tifrunner.gnm1.ann1.MJW4NY Arachis hypogaea HOM05D004399 ORTHO05D005303 4.2e-98 361.7 216 76.9
CARHR146010 Cardamine hirsuta HOM05D004399 ORTHO05D005303 5.5e-98 361.3 215 77.7
AUR62003087 Chenopodium quinoa HOM05D004399 ORTHO05D005303 5.5e-98 361.3 215 76.7
Phvul.010G102900 Phaseolus vulgaris HOM05D004399 ORTHO05D005303 5.5e-98 361.3 216 75.9
A02p33520 Brassica napus HOM05D004399 ORTHO05D005303 7.2e-98 360.9 215 77.2
Lalb_Chr17g0341271 Lupinus albus HOM05D004399 ORTHO05D005303 7.2e-98 360.9 211 78.2
Medtr4g094990 Medicago truncatula HOM05D004399 ORTHO05D005303 7.2e-98 360.9 216 76.4
ClCG08G010510 Citrullus lanatus HOM05D004399 ORTHO05D005303 9.5e-98 360.5 229 74.7
Aa31LG2G6990 Aethionema arabicum HOM05D004399 ORTHO05D005303 1.2e-97 360.1 216 75.5
AT2G03690 Arabidopsis thaliana HOM05D004399 ORTHO05D005303 1.2e-97 360.1 215 77.2
MD16G1059800 Malus domestica HOM05D004399 ORTHO05D005303 2.1e-97 359.4 215 77.7
THA.LOC104805201 Tarenaya hassleriana HOM05D004399 ORTHO05D005303 2.8e-97 359.0 215 76.3
Medtr7g095060 Medicago truncatula HOM05D004399 ORTHO05D005303 3.6e-97 358.6 216 76.4
AL5G13460 Arabidopsis lyrata HOM05D004399 ORTHO05D005303 1.0e-96 357.1 215 76.7
VMungo0331G0538 Vigna mungo HOM05D004399 ORTHO05D005303 1.0e-96 357.1 216 75.0
Oeu031535.3 Olea europaea HOM05D004399 ORTHO05D005303 1.4e-96 356.7 243 70.0
Nitab4.5_0000231g0090 Nicotiana tabacum HOM05D004399 ORTHO05D005303 1.8e-96 356.3 248 67.7
Gorai.005G145900 Gossypium raimondii HOM05D004399 ORTHO05D005303 2.3e-96 355.9 205 80.0
Sed0000590 Sechium edule HOM05D004399 ORTHO05D005303 2.3e-96 355.9 216 75.5
Glyma.16G032800 Glycine max HOM05D004399 ORTHO05D005303 5.2e-96 354.8 216 76.4
BcaC03g17230 Brassica carinata HOM05D004399 ORTHO05D005303 6.8e-96 354.4 215 76.7
BolC2t11249H Brassica oleracea HOM05D004399 ORTHO05D005303 6.8e-96 354.4 215 76.7
AUR62007904 Chenopodium quinoa HOM05D004399 ORTHO05D005303 6.8e-96 354.4 215 75.3
Medtr4g094998 Medicago truncatula HOM05D004399 ORTHO05D005303 2.6e-95 352.4 216 74.1
Gohir.D02G129900 Gossypium hirsutum HOM05D004399 ORTHO05D005303 3.4e-95 352.1 205 78.5
SEGI_29941 Sequoiadendron giganteum HOM05D004399 ORTHO05D005303 3.4e-95 352.1 216 73.1
Atru.chr11.1611 Acer truncatum HOM05D004399 ORTHO05D005303 4.4e-95 351.7 216 75.5
Glyma.07G066700 Glycine max HOM05D004399 ORTHO05D005303 1.7e-94 349.7 216 75.0
SalBow2G2941 Salvia bowleyana HOM05D004399 ORTHO05D005303 2.2e-94 349.4 271 63.1
Sed0002833 Sechium edule HOM05D004399 ORTHO05D005303 7.0e-93 344.4 216 73.6
TPR.G29232 Trifolium pratense HOM05D004399 ORTHO05D005303 2.9e-91 339.0 216 74.5
C02p51640 Brassica napus HOM05D004399 ORTHO05D005303 5.6e-90 334.7 205 77.1
Mapoly0124s0026 Marchantia polymorpha HOM05D004399 ORTHO05D005303 4.9e-86 321.6 216 68.1
AagrBONN_evm.TU.Sc2ySwM_368.1886 Anthoceros agrestis HOM05D004399 ORTHO05D005303 3.2e-85 318.9 218 67.4
AUR62019674 Chenopodium quinoa HOM05D004399 ORTHO05D005303 1.7e-83 313.2 222 68.0
SMO196G0238 Selaginella moellendorffii HOM05D004399 ORTHO05D005303 1.9e-82 309.7 216 65.7
Pp3c2_220 Physcomitrium patens HOM05D004399 ORTHO05D005303 4.0e-80 302.0 211 65.9
GSVIVG01000552001 Vitis vinifera HOM05D004399 ORTHO05D005303 2.8e-73 279.3 168 79.2
MD13G1061300 Malus domestica HOM05D004399 ORTHO05D005303 5.2e-72 275.0 160 83.1
SalBow4G2688 Salvia bowleyana HOM05D004399 ORTHO05D005303 5.4e-69 265.0 153 77.1
Sed0017877 Sechium edule HOM05D004399 ORTHO05D005303 1.2e-68 263.8 168 71.4
CBR_g38753 Chara braunii HOM05D004399 ORTHO05D001303 1.0e-67 260.8 217 56.2
ATR1120G108 Amborella trichopoda HOM05D004399 ORTHO05D005303 1.7e-67 260.0 161 72.0
SalBow4G1336 Salvia bowleyana HOM05D004399 ORTHO05D005303 3.0e-59 232.6 157 68.2
PRCOL_00001738 Prasinoderma coloniale HOM05D004399 ORTHO05D005303 6.2e-57 224.9 212 52.4
TPR.G35678 Trifolium pratense HOM05D004399 ORTHO05D005303 8.1e-57 224.6 126 78.6
Cre03.g154850 Chlamydomonas reinhardtii HOM05D004399 ORTHO05D005303 4.4e-55 218.8 214 50.5
HanXRQChr10g0298331 Helianthus annuus HOM05D004399 ORTHO05D005303 1.7e-54 216.9 132 75.0
vmacro20929 Vaccinium macrocarpon HOM05D004399 ORTHO05D005303 9.6e-50 201.1 147 70.1
MCO10G350 Micromonas commoda HOM05D004399 ORTHO05D005303 1.1e-48 197.6 217 44.2
unitig_8.g3180 Utricularia gibba HOM05D004399 ORTHO05D005303 1.4e-48 197.2 111 82.0
SMO187G0002 Selaginella moellendorffii HOM05D004399 ORTHO05D005303 1.3e-43 180.6 130 61.5
Phvul.007G165400 Phaseolus vulgaris HOM05D004399 ORTHO05D005303 1.5e-42 177.2 110 70.0
Glyma.02G119500 Glycine max HOM05D004399 ORTHO05D005303 1.9e-42 176.8 110 71.8
MBI14_g45258_MAGBIO Magnolia biondii HOM05D004399 ORTHO05D005303 1.3e-33 147.5 92 71.7
Carub.0005s2415 Capsella rubella HOM05D004399 ORTHO05D005303 1.4e-32 144.1 96 68.8
Cfa024149 Carpinus fangiana HOM05D004399 ORTHO05D005303 2.6e-31 139.8 218 34.9
HanXRQChr13g0414251 Helianthus annuus HOM05D004399 ORTHO05D005303 1.1e-29 134.4 94 73.4
FAN04G2106 Fragaria x ananassa HOM05D004399 ORTHO05D005303 1.9e-26 123.6 75 78.7
SalBow4G1060 Salvia bowleyana HOM05D004399 ORTHO05D005303 3.3e-26 122.9 66 81.8
BcaB07g30659 Brassica carinata HOM05D004399 ORTHO05D005303 1.1e-24 117.9 134 45.5
Actinidia12918 Actinidia chinensis HOM05D004399 ORTHO05D005303 5.3e-24 115.5 108 51.9
TPR.G30910 Trifolium pratense HOM05D004399 ORTHO05D005303 1.2e-23 114.4 61 83.6
Phvul.007G165450 Phaseolus vulgaris HOM05D004399 ORTHO05D005303 2.2e-22 110.2 75 70.7
ATR1120G192 Amborella trichopoda HOM05D004399 ORTHO05D005303 3.6e-20 102.8 64 78.1
HanXRQChr01g0013031 Helianthus annuus HOM05D004399 ORTHO05D005303 5.1e-19 99.0 54 79.6
SalBow4G1426 Salvia bowleyana HOM05D000195 ORTHO05D000377 1.1e-18 97.8 58 82.8
Nn4g23036 Nelumbo nucifera HOM05D004399 ORTHO05D005303 3.7e-17 92.8 64 68.8
RcHm_v2.0_Chr7g0182561 Rosa chinensis HOM05D004399 ORTHO05D005303 3.7e-17 92.8 58 77.6
TPR.G35682 Trifolium pratense HOM05D004399 ORTHO05D005303 3.7e-17 92.8 66 71.2
SalBow4G1755 Salvia bowleyana HOM05D004399 ORTHO05D005303 5.3e-16 89.0 55 61.8
HPP92_015023 Vanilla planifolia HOM05D000240 ORTHO05D001153 5.0e-14 82.4 101 45.5
FAN08G1770 Fragaria x ananassa HOM05D004399 ORTHO05D005303 1.6e-12 77.4 125 42.4
SEGI_28424 Sequoiadendron giganteum HOM05D004399 ORTHO05D005303 2.7e-12 76.6 51 72.5
Glyma.07G066400 Glycine max HOM05D004399 ORTHO05D005303 7.9e-12 75.1 51 72.5
A09p24540 Brassica napus HOM05D004399 ORTHO05D005303 2.8e-09 66.6 39 71.8
SalBow4G0663 Salvia bowleyana HOM05D000195 ORTHO05D000377 1.3e-06 57.8 35 77.1


User provided reference genes

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