Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3007 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 0.0e+00 1246.9 740 100.0
CDE02G2532 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 2.0e-205 719.9 577 80.1
MBI07_g11487_MAGBIO Magnolia biondii HOM05D005855 ORTHO05D006406 9.2e-155 551.6 787 52.4
TAR633G1091 Trochodendron aralioides HOM05D005855 ORTHO05D006406 3.5e-138 496.5 773 49.7
Dinv17130 Davidia involucrata HOM05D005855 ORTHO05D006406 1.6e-130 471.1 764 48.8
TAR362G1086 Trochodendron aralioides HOM05D005855 ORTHO05D006406 3.0e-129 466.8 771 47.7
Actinidia19643 Actinidia chinensis HOM05D005855 ORTHO05D006406 5.1e-129 466.1 783 47.3
Aqoxy2G04154 Aquilegia oxysepala HOM05D005855 ORTHO05D006406 8.2e-119 432.2 791 39.7
PSO573G0046 Papaver somniferum HOM05D005855 ORTHO05D006406 4.5e-117 426.4 784 47.3
vmacro08871 Vaccinium macrocarpon HOM05D005855 ORTHO05D006406 7.6e-117 425.6 807 41.8
PSO017G4019 Papaver somniferum HOM05D005855 ORTHO05D006406 2.2e-116 424.1 787 47.0
ClCG11G010010 Citrullus lanatus HOM05D005855 ORTHO05D006406 4.9e-116 422.9 744 44.4
CANSAT64G2413 Cannabis sativa HOM05D005855 ORTHO05D006406 6.5e-116 422.5 761 47.7
QL01p051722 Quercus lobata HOM05D005855 ORTHO05D006406 7.1e-115 419.1 767 44.3
QL01p051691 Quercus lobata HOM05D005855 ORTHO05D006406 9.3e-115 418.7 767 44.3
Rhsim04G0133000 Rhododendron simsii HOM05D005855 ORTHO05D006406 1.8e-113 414.5 792 45.3
Prupe.6G365000 Prunus persica HOM05D005855 ORTHO05D006406 3.9e-113 413.3 773 45.3
Sed0023015 Sechium edule HOM05D005855 ORTHO05D006406 3.9e-113 413.3 758 44.3
Manes.13G000700 Manihot esculenta HOM05D005855 ORTHO05D006406 4.3e-112 409.8 775 43.2
Ca_08015_v3 Cicer arietinum L. HOM05D005855 ORTHO05D006406 9.7e-112 408.7 789 38.8
MELO3C008612.2 Cucumis melo HOM05D005855 ORTHO05D006406 9.7e-112 408.7 761 43.2
TPR.G31229 Trifolium pratense HOM05D005855 ORTHO05D006406 2.8e-111 407.1 797 39.3
CsaV3_2G010280 Cucumis sativus L. HOM05D005855 ORTHO05D006406 6.3e-111 406.0 761 43.4
FAN02G1917 Fragaria x ananassa HOM05D005855 ORTHO05D006406 6.3e-111 406.0 774 44.1
CiPaw.08G111900 Carya illinoinensis HOM05D005855 ORTHO05D006406 1.1e-110 405.2 769 42.4
THA.LOC104822010 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 1.4e-110 404.8 771 37.5
Phvul.008G051800 Phaseolus vulgaris HOM05D005855 ORTHO05D006406 1.8e-110 404.4 759 37.4
MD00G1017400 Malus domestica HOM05D005855 ORTHO05D006406 1.2e-109 401.7 774 44.1
MD12G1261700 Malus domestica HOM05D005855 ORTHO05D006406 2.0e-109 401.0 775 44.6
DCAR_031596 Daucus carota HOM05D005855 ORTHO05D006406 2.9e-108 397.1 774 41.7
FvH4_6g00081 Fragaria vesca HOM05D005855 ORTHO05D006406 3.8e-108 396.7 776 44.5
Lalb_Chr03g0038151 Lupinus albus HOM05D005855 ORTHO05D006406 1.1e-107 395.2 774 38.6
FAN14G2818 Fragaria x ananassa HOM05D005855 ORTHO05D006406 3.2e-107 393.7 776 44.3
RcHm_v2.0_Chr3g0447421 Rosa chinensis HOM05D005855 ORTHO05D006406 3.2e-107 393.7 764 44.0
Atru.chr2.218 Acer truncatum HOM05D005855 ORTHO05D006406 7.2e-107 392.5 782 43.4
VMungo1383G1707 Vigna mungo HOM05D005855 ORTHO05D006406 7.2e-107 392.5 752 38.2
MSTRG.8191 Avicennia marina HOM05D005855 ORTHO05D006406 9.4e-107 392.1 754 45.5
PGR031G3878 Punica granatum HOM05D005855 ORTHO05D006406 9.4e-107 392.1 782 44.8
Solyc11g008670.2 Solanum lycopersicum HOM05D005855 ORTHO05D006406 9.4e-107 392.1 760 44.5
Sopen11g004450 Solanum pennellii HOM05D005855 ORTHO05D006406 9.4e-107 392.1 760 44.9
PGSC0003DMG400016248 Solanum tuberosum HOM05D005855 ORTHO05D006406 2.1e-106 391.0 773 44.8
THA.LOC104805689 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 3.6e-106 390.2 773 42.4
Lj8C197T11 Lonicera japonica HOM05D005855 ORTHO05D006406 1.4e-105 388.3 795 43.6
Sabra08G0057900 Salix brachista HOM05D005855 ORTHO05D006406 1.4e-105 388.3 769 42.7
Cc09_g04110 Coffea canephora HOM05D005855 ORTHO05D006406 1.8e-105 387.9 765 44.3
Glyma.18G244800 Glycine max HOM05D005855 ORTHO05D006406 2.3e-105 387.5 776 36.3
Glyma.09G248000 Glycine max HOM05D005855 ORTHO05D006406 8.8e-105 385.6 776 38.8
Lj1g0024601 Lotus japonicus HOM05D005855 ORTHO05D006406 2.0e-104 384.4 770 39.6
Potri.008G077800 Populus trichocarpa HOM05D005855 ORTHO05D006406 2.5e-104 384.0 767 42.2
arahy.Tifrunner.gnm1.ann1.VEFL47 Arachis hypogaea HOM05D005855 ORTHO05D006406 3.3e-104 383.6 770 40.6
Haze_04608 Corylus avellana HOM05D005855 ORTHO05D006406 3.3e-104 383.6 846 39.7
CARHR057120 Cardamine hirsuta HOM05D005855 ORTHO05D006406 8.2e-103 379.0 774 44.2
Hund21931 Selenicereus undatus HOM05D005855 ORTHO05D006406 1.4e-102 378.3 766 42.2
Psat3g103080 Pisum sativum HOM05D005855 ORTHO05D006406 1.8e-102 377.9 797 41.9
Sp5g20320 Schrenkiella parvula HOM05D005855 ORTHO05D006406 1.8e-102 377.9 791 39.7
Peaxi162Scf00254g00712 Petunia axillaris HOM05D005855 ORTHO05D006406 2.4e-102 377.5 780 44.1
Sc16g0010640 Simmondsia chinensis HOM05D005855 ORTHO05D006406 2.4e-102 377.5 754 44.0
Migut.F01842 Erythranthe guttata HOM05D005855 ORTHO05D006406 4.1e-102 376.7 770 45.2
Thhalv10018127m.g Eutrema salsugineum HOM05D005855 ORTHO05D006406 9.1e-102 375.6 793 38.8
Lalb_Chr21g0311491 Lupinus albus HOM05D005855 ORTHO05D006406 3.4e-101 373.6 765 37.5
Medtr7g080500 Medicago truncatula HOM05D005855 ORTHO05D006406 4.5e-101 373.2 772 39.1
AL2G22160 Arabidopsis lyrata HOM05D005855 ORTHO05D006406 1.0e-100 372.1 767 44.6
Gohir.A02G107108 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.0e-100 372.1 756 44.3
AT1G65470 Arabidopsis thaliana HOM05D005855 ORTHO05D006406 6.5e-100 369.4 773 44.8
CAN.G321.5 Capsicum annuum HOM05D005855 ORTHO05D006406 1.1e-99 368.6 769 44.9
ECA232G0592 Erigeron canadensis HOM05D005855 ORTHO05D006406 1.1e-99 368.6 783 40.4
Nitab4.5_0003928g0050 Nicotiana tabacum HOM05D005855 ORTHO05D006406 2.5e-99 367.5 799 42.8
Nitab4.5_0001003g0160 Nicotiana tabacum HOM05D005855 ORTHO05D006406 1.2e-98 365.2 799 39.9
Duzib177G0112 Durio zibethinus HOM05D005855 ORTHO05D006406 1.6e-98 364.8 771 46.2
AUR62000270 Chenopodium quinoa HOM05D005855 ORTHO05D006406 3.0e-97 360.5 787 42.4
Ah.04g159310 Amaranthus hybridus HOM05D005855 ORTHO05D006406 3.9e-97 360.1 766 39.8
FAN09G4305 Fragaria x ananassa HOM05D005855 ORTHO05D006406 6.7e-97 359.4 795 41.9
Gorai.002G148000 Gossypium raimondii HOM05D005855 ORTHO05D006406 2.6e-96 357.5 786 41.7
Gohir.A13G090000 Gossypium hirsutum HOM05D005855 ORTHO05D006406 3.7e-95 353.6 783 41.3
Lsat_1_v5_gn_0_14480 Lactuca sativa HOM05D005855 ORTHO05D006406 1.4e-94 351.7 754 45.9
ATR0743G043 Amborella trichopoda HOM05D005855 ORTHO05D006406 2.4e-94 350.9 819 37.5
HanXRQChr16g0511741 Helianthus annuus HOM05D005855 ORTHO05D006406 2.4e-94 350.9 766 45.0
Zm00001eb365740 Zea mays HOM05D005855 ORTHO05D006406 1.5e-93 348.2 821 38.5
Gohir.D03G072500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 2.0e-93 347.8 756 43.3
SGA_v2.0_scaffold340G49313 Striga asiatica HOM05D005855 ORTHO05D006406 2.6e-93 347.4 760 41.2
Gorai.003G087300 Gossypium raimondii HOM05D005855 ORTHO05D006406 4.5e-93 346.7 755 43.3
BraA07t30911Z Brassica rapa HOM05D005855 ORTHO05D006406 1.3e-92 345.1 795 40.6
Aa31LG2G2480 Aethionema arabicum HOM05D005855 ORTHO05D006406 2.2e-92 344.4 773 37.8
A07p32840 Brassica napus HOM05D005855 ORTHO05D006406 2.9e-92 344.0 795 40.6
Ciclev10000302m.g Citrus clementina HOM05D005855 ORTHO05D006406 4.2e-91 340.1 771 40.7
Thecc.05G112200 Theobroma cacao HOM05D005855 ORTHO05D006406 4.2e-91 340.1 761 42.3
Oeu034710.1 Olea europaea HOM05D005855 ORTHO05D006406 2.7e-90 337.4 752 43.2
TWI18G0231 Tripterygium wilfordii HOM05D005855 ORTHO05D006406 4.7e-90 336.7 755 39.6
Carub.0002s1120 Capsella rubella HOM05D005855 ORTHO05D006406 6.1e-90 336.3 792 41.8
Zm00001eb144810 Zea mays HOM05D005855 ORTHO05D006406 1.0e-89 335.5 857 36.1
EL10Ac4g10026 Beta vulgaris HOM05D005855 ORTHO05D006406 1.4e-89 335.1 772 40.9
SGA_v2.0_scaffold122G33208 Striga asiatica HOM05D005855 ORTHO05D006406 1.4e-89 335.1 783 42.1
BolC6t38999H Brassica oleracea HOM05D005855 ORTHO05D006406 2.3e-89 334.3 785 40.8
C06p39070 Brassica napus HOM05D005855 ORTHO05D006406 3.0e-89 334.0 785 40.6
unitig_749.g13497 Utricularia gibba HOM05D005855 ORTHO05D006406 1.5e-88 331.6 759 43.7
Potri.002G209795 Populus trichocarpa HOM05D005855 ORTHO05D006406 2.0e-88 331.3 682 43.3
Gohir.D13G093500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 3.3e-88 330.5 787 41.3
AUR62006618 Chenopodium quinoa HOM05D005855 ORTHO05D006406 6.3e-87 326.2 782 39.4
COL.COLO4_22931 Corchorus olitorius HOM05D005855 ORTHO05D006406 1.4e-86 325.1 784 40.3
TWI36G1346 Tripterygium wilfordii HOM05D000941 ORTHO05D006406 3.1e-86 323.9 763 40.2
Os01g0896300 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 1.6e-85 321.6 824 37.0
Actinidia07922 Actinidia chinensis HOM05D005855 ORTHO05D006406 3.8e-84 317.0 648 42.7
HPP92_024393 Vanilla planifolia HOM05D005855 ORTHO05D006406 8.8e-81 305.8 764 41.8
Eucgr.B01457 Eucalyptus grandis HOM05D005855 ORTHO05D006406 2.2e-79 301.2 657 41.1
SEGI_12971 Sequoiadendron giganteum HOM05D005855 ORTHO05D006406 1.1e-75 288.9 802 41.1
Oeu001220.3 Olea europaea HOM05D005855 ORTHO05D006406 2.0e-72 278.1 717 41.1
Actinidia31264 Actinidia chinensis HOM05D005855 ORTHO05D006406 6.3e-71 273.1 781 33.7
Zm00001eb304780 Zea mays HOM05D005855 ORTHO05D006406 1.4e-70 271.9 759 33.7
QL01p051710 Quercus lobata HOM05D005855 ORTHO05D006406 7.2e-67 259.6 460 39.1
arahy.Tifrunner.gnm1.ann1.65FHJK Arachis hypogaea HOM05D005855 ORTHO05D006406 7.5e-56 223.0 450 38.9
Os07g0273301 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 2.8e-42 177.9 457 31.5
arahy.Tifrunner.gnm1.ann1.8C47BX Arachis hypogaea HOM05D005855 ORTHO05D006406 1.3e-39 169.1 464 32.1
arahy.Tifrunner.gnm1.ann1.F2WWIZ Arachis hypogaea HOM05D005855 ORTHO05D006406 1.9e-38 165.2 452 33.2
AagrBONN_evm.TU.Sc2ySwM_344.4907 Anthoceros agrestis HOM05D005855 ORTHO05D006406 4.3e-35 154.1 769 28.7
GSVIVG01007185001 Vitis vinifera HOM05D005855 ORTHO05D006406 3.6e-34 151.0 202 46.5
GSVIVG01007186001 Vitis vinifera HOM05D005855 ORTHO05D006406 3.2e-30 137.9 111 59.5
Cpa.g.sc88.1 Carica papaya HOM05D005855 ORTHO05D006406 2.1e-29 135.2 565 26.0
Mapoly0189s0010 Marchantia polymorpha HOM05D005855 ORTHO05D006406 4.6e-29 134.0 704 33.4
Dinv29076 Davidia involucrata HOM05D005855 ORTHO05D006406 2.3e-28 131.7 139 52.5
Cpa.g.c37190 Carica papaya HOM05D005855 ORTHO05D006406 3.0e-28 131.3 168 44.6
SMO356G0323 Selaginella moellendorffii HOM05D005855 ORTHO05D006406 2.1e-26 125.2 426 31.7
VMungo1383G0582 Vigna mungo HOM05D005855 ORTHO05D000818 4.8e-26 124.0 225 35.1
Pp3c3_24970 Physcomitrium patens HOM05D005855 ORTHO05D006406 3.8e-23 114.4 377 27.9
TPR.G32502 Trifolium pratense HOM05D005855 ORTHO05D006406 1.3e-20 105.9 149 38.9
Zm00001eb310680 Zea mays HOM05D000012 ORTHO05D006406 2.8e-18 98.2 137 43.8
arahy.Tifrunner.gnm1.ann1.X0XBNQ Arachis hypogaea HOM05D005855 ORTHO05D006406 9.0e-17 93.2 113 58.4
CBR_g39948 Chara braunii HOM05D005855 ORTHO05D006406 4.6e-13 80.9 156 36.5
Zm00001eb381860 Zea mays HOM05D000012 ORTHO05D006406 1.9e-11 75.5 89 47.2
Ah.06g195260 Amaranthus hybridus HOM05D005855 ORTHO05D006406 1.9e-06 58.9 120 30.8


User provided reference genes

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