Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 1.5e-233 812.4 394 100.0
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 9.9e-156 553.9 440 66.1
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 3.1e-85 319.7 418 41.9
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 7.0e-85 318.5 437 40.3
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 1.7e-83 313.9 441 40.1
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 2.5e-82 310.1 415 39.8
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 9.5e-82 308.1 439 39.9
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 1.2e-81 307.8 420 38.8
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 3.6e-81 306.2 423 40.0
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 6.1e-81 305.4 413 43.3
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 6.1e-81 305.4 425 37.6
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 8.0e-81 305.1 423 39.7
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 1.0e-80 304.7 427 39.6
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 1.8e-80 303.9 421 38.2
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 5.2e-80 302.4 418 38.8
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 5.2e-80 302.4 439 39.0
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 8.9e-80 301.6 441 38.1
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 2.0e-79 300.4 426 38.5
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 2.0e-79 300.4 416 38.5
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 2.6e-79 300.1 417 38.6
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 3.4e-79 299.7 409 41.3
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 3.7e-78 296.2 417 38.1
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 3.7e-78 296.2 416 38.2
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 3.7e-78 296.2 409 39.6
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 6.3e-78 295.4 420 38.8
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 8.3e-78 295.0 417 38.1
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 8.3e-78 295.0 470 37.7
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 1.1e-77 294.7 420 39.8
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 1.1e-77 294.7 419 38.2
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 1.4e-77 294.3 423 38.3
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 2.7e-76 290.0 417 38.4
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 3.5e-76 289.7 436 38.3
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 1.3e-75 287.7 429 37.5
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 1.7e-75 287.3 422 38.2
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 6.6e-75 285.4 427 39.1
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 6.6e-75 285.4 460 35.9
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 1.1e-74 284.6 441 37.9
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 1.9e-74 283.9 436 37.6
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 3.3e-74 283.1 420 37.9
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 3.3e-74 283.1 421 38.0
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 5.6e-74 282.3 434 38.2
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 5.6e-74 282.3 418 36.8
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 9.5e-74 281.6 424 37.7
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 9.5e-74 281.6 433 36.7
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 1.6e-73 280.8 388 39.9
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 2.8e-73 280.0 429 37.3
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 2.8e-73 280.0 416 36.3
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 2.8e-73 280.0 434 36.2
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 8.0e-73 278.5 380 40.8
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 1.0e-72 278.1 379 40.1
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 1.0e-72 278.1 414 36.7
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 2.3e-72 276.9 425 36.9
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 4.0e-72 276.2 419 37.5
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 5.2e-72 275.8 417 37.6
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 6.8e-72 275.4 417 37.6
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 2.0e-71 273.9 424 37.3
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 2.6e-71 273.5 433 37.9
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 2.6e-71 273.5 417 37.6
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 2.6e-71 273.5 430 37.4
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 3.4e-71 273.1 421 35.6
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 7.5e-71 271.9 418 37.1
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 2.2e-70 270.4 431 36.7
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 2.2e-70 270.4 429 38.2
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 1.9e-69 267.3 431 36.9
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 2.7e-68 263.5 382 39.8
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 3.5e-68 263.1 431 36.2
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 3.5e-68 263.1 426 39.7
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 1.3e-67 261.2 431 36.4
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 1.7e-67 260.8 431 36.0
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 3.9e-67 259.6 421 36.8
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 3.9e-67 259.6 220 52.3
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 5.0e-67 259.2 431 35.7
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 8.6e-67 258.5 431 36.0
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 8.6e-67 258.5 431 36.0
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 1.9e-66 257.3 219 52.1
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 5.6e-66 255.8 431 35.7
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.8e-65 253.4 433 34.4
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 6.2e-65 252.3 430 37.2
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 8.0e-65 251.9 422 32.2
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 1.8e-64 250.8 369 36.6
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 3.1e-64 250.0 426 34.3
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 4.0e-64 249.6 380 35.8
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 8.9e-64 248.4 440 35.7
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 1.3e-62 244.6 375 37.3
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 1.7e-62 244.2 406 36.9
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 2.2e-62 243.8 444 32.7
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 3.7e-62 243.0 439 32.8
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 8.3e-62 241.9 371 36.1
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 2.4e-61 240.4 379 35.6
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 3.2e-61 240.0 223 49.8
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 3.2e-61 240.0 219 51.1
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 4.1e-61 239.6 477 33.1
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 1.2e-60 238.0 387 36.4
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 2.1e-60 237.3 370 36.5
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 3.5e-60 236.5 386 35.5
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 4.6e-60 236.1 442 35.3
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 1.1e-58 231.5 377 34.2
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 2.1e-57 227.3 430 34.4
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 3.6e-57 226.5 441 34.0
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 1.4e-56 224.6 430 33.5
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 1.2e-55 221.5 406 33.5
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 4.4e-55 219.5 426 33.3
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 7.5e-55 218.8 437 33.4
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 2.4e-53 213.8 396 34.8
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 4.1e-53 213.0 422 33.4
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 7.1e-53 212.2 439 32.6
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 2.1e-52 210.7 436 31.9
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 4.6e-52 209.5 426 31.2
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 1.0e-51 208.4 226 46.0
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 1.6e-49 201.1 430 31.2
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 2.1e-49 200.7 364 36.0
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 3.1e-48 196.8 430 30.9
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.6e-47 193.7 250 38.4
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 1.1e-45 188.3 421 30.9
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 9.2e-45 185.3 433 29.8
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.6e-44 184.5 393 31.6
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 6.6e-43 179.1 437 30.2
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 1.1e-42 178.3 418 31.8
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 1.5e-42 177.9 388 31.2
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 4.3e-42 176.4 228 41.2
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 2.9e-38 163.7 390 28.7
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 4.6e-36 156.4 285 35.1
MBI19_g37437_MAGBIO Magnolia biondii HOM05D005756 ORTHO05D007991 1.0e-35 155.2 129 54.3
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 3.0e-35 153.7 294 34.0
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 1.6e-33 147.9 115 56.5
SEGI_18115 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 7.9e-12 75.9 60 51.7
Cpa.g.sc211.21 Carica papaya HOM05D005756 ORTHO05D018916 7.7e-07 59.3 50 56.0


User provided reference genes

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