Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2998 Ceratophyllum demersum HOM05D003542 ORTHO05D018761 9.6e-48 193.0 85 100.0
CSS0026658 Camellia sinensis var. sinensis HOM05D003542 ORTHO05D004799 3.1e-38 161.4 85 78.8
TWI60G1302 Tripterygium wilfordii HOM05D003542 ORTHO05D004799 2.9e-36 154.8 84 77.4
Rhsim11G0037300 Rhododendron simsii HOM05D003542 ORTHO05D004799 3.8e-36 154.5 92 72.8
Actinidia01250 Actinidia chinensis HOM05D003542 ORTHO05D004799 4.9e-36 154.1 84 77.4
Ciclev10011269m.g Citrus clementina HOM05D003542 ORTHO05D004799 1.9e-35 152.1 84 75.0
Duzib205G1391 Durio zibethinus HOM05D003542 ORTHO05D004799 1.9e-35 152.1 84 77.4
Oeu036053.1 Olea europaea HOM05D003542 ORTHO05D004799 2.4e-35 151.8 84 75.0
Potri.004G235800 Populus trichocarpa HOM05D003542 ORTHO05D004799 2.4e-35 151.8 84 76.2
TAR375G0128 Trochodendron aralioides HOM05D003542 ORTHO05D004799 2.4e-35 151.8 84 76.2
Gohir.D12G204200 Gossypium hirsutum HOM05D003542 ORTHO05D004799 3.2e-35 151.4 85 74.1
Gorai.008G219000 Gossypium raimondii HOM05D003542 ORTHO05D004799 3.2e-35 151.4 85 74.1
Manes.15G191800 Manihot esculenta HOM05D003542 ORTHO05D004799 3.2e-35 151.4 84 76.2
Prupe.5G011600 Prunus persica HOM05D003542 ORTHO05D004799 3.2e-35 151.4 82 76.8
Manes.17G001100 Manihot esculenta HOM05D003542 ORTHO05D004799 4.2e-35 151.0 84 73.8
Eucgr.E01147 Eucalyptus grandis HOM05D003542 ORTHO05D004799 5.4e-35 150.6 85 74.1
Thecc.03G319900 Theobroma cacao HOM05D003542 ORTHO05D004799 7.1e-35 150.2 84 75.0
MD06G1008500 Malus domestica HOM05D003542 ORTHO05D004799 9.3e-35 149.8 82 75.6
TAR374G0820 Trochodendron aralioides HOM05D003542 ORTHO05D018761 9.3e-35 149.8 84 76.2
CiPaw.11G074400 Carya illinoinensis HOM05D003542 ORTHO05D004799 4.6e-34 147.5 82 73.2
Aqoxy5G03565 Aquilegia oxysepala HOM05D003542 ORTHO05D004799 7.9e-34 146.7 85 71.8
Gorai.004G177500 Gossypium raimondii HOM05D003542 ORTHO05D004799 7.9e-34 146.7 84 75.0
HanXRQChr17g0537321 Helianthus annuus HOM05D003542 ORTHO05D004799 7.9e-34 146.7 85 72.9
Nn3g19110 Nelumbo nucifera HOM05D003542 ORTHO05D004799 7.9e-34 146.7 85 71.8
arahy.Tifrunner.gnm1.ann1.GAUN3U Arachis hypogaea HOM05D003542 ORTHO05D004799 1.0e-33 146.4 82 78.0
arahy.Tifrunner.gnm1.ann1.JPC2KC Arachis hypogaea HOM05D003542 ORTHO05D004799 1.0e-33 146.4 82 78.0
ECA246G1310 Erigeron canadensis HOM05D003542 ORTHO05D004799 1.0e-33 146.4 85 71.8
Glyma.01G153600 Glycine max HOM05D003542 ORTHO05D004799 1.0e-33 146.4 82 75.6
Phvul.002G122000 Phaseolus vulgaris HOM05D003542 ORTHO05D004799 1.0e-33 146.4 82 74.4
CAN.G998.13 Capsicum annuum HOM05D003542 ORTHO05D004799 1.8e-33 145.6 85 72.9
CiPaw.12G055200 Carya illinoinensis HOM05D003542 ORTHO05D004799 1.8e-33 145.6 82 72.0
Gohir.A08G149000 Gossypium hirsutum HOM05D003542 ORTHO05D004799 1.8e-33 145.6 84 73.8
Nitab4.5_0006371g0020 Nicotiana tabacum HOM05D003542 ORTHO05D004799 1.8e-33 145.6 85 71.8
RcHm_v2.0_Chr7g0215361 Rosa chinensis HOM05D003542 ORTHO05D004799 1.8e-33 145.6 83 72.3
Solyc08g075340.3 Solanum lycopersicum HOM05D003542 ORTHO05D004799 2.3e-33 145.2 85 72.9
Sopen08g023950 Solanum pennellii HOM05D003542 ORTHO05D004799 2.3e-33 145.2 85 72.9
FvH4_5g25240 Fragaria vesca HOM05D003542 ORTHO05D004799 3.0e-33 144.8 82 74.4
Gohir.D08G170000 Gossypium hirsutum HOM05D003542 ORTHO05D004799 3.0e-33 144.8 84 73.8
Nitab4.5_0002603g0020 Nicotiana tabacum HOM05D003542 ORTHO05D004799 3.0e-33 144.8 85 70.6
VMungo1215G0924 Vigna mungo HOM05D003542 ORTHO05D004799 3.0e-33 144.8 80 77.5
Cpa.g.sc352.2 Carica papaya HOM05D003542 ORTHO05D018761 3.9e-33 144.4 89 73.0
Haze_08429 Corylus avellana HOM05D003542 ORTHO05D004799 5.1e-33 144.1 82 72.0
Lalb_Chr05g0229201 Lupinus albus HOM05D003542 ORTHO05D004799 5.1e-33 144.1 82 74.4
Glyma.11G091000 Glycine max HOM05D003542 ORTHO05D004799 6.7e-33 143.7 82 73.2
Cc04_g11570 Coffea canephora HOM05D003542 ORTHO05D004799 8.7e-33 143.3 82 73.2
FAN08G1408 Fragaria x ananassa HOM05D003542 ORTHO05D004799 8.7e-33 143.3 82 73.2
FAN13G1207 Fragaria x ananassa HOM05D003542 ORTHO05D004799 8.7e-33 143.3 82 73.2
Glyma.16G109700 Glycine max HOM05D003542 ORTHO05D004799 8.7e-33 143.3 82 75.6
Hma1.2p1_0839F.1_g226340 Hydrangea macrophylla HOM05D003542 ORTHO05D004799 8.7e-33 143.3 84 71.4
Peaxi162Scf00053g00006 Petunia axillaris HOM05D003542 ORTHO05D004799 8.7e-33 143.3 85 69.4
Glyma.16G076700 Glycine max HOM05D003542 ORTHO05D004799 1.1e-32 142.9 82 76.8
HanXRQChr06g0173181 Helianthus annuus HOM05D003542 ORTHO05D004799 1.5e-32 142.5 85 71.8
Phvul.003G278500 Phaseolus vulgaris HOM05D003542 ORTHO05D004799 1.5e-32 142.5 82 75.6
arahy.Tifrunner.gnm1.ann1.B24I2L Arachis hypogaea HOM05D003542 ORTHO05D004799 1.9e-32 142.1 82 73.2
GSVIVG01036881001 Vitis vinifera HOM05D003542 ORTHO05D004799 1.9e-32 142.1 84 71.4
BcaB06g28850 Brassica carinata HOM05D003542 ORTHO05D004799 2.5e-32 141.7 82 72.0
Cc08_g05880 Coffea canephora HOM05D003542 ORTHO05D004799 2.5e-32 141.7 82 73.2
Cfa012300 Carpinus fangiana HOM05D003542 ORTHO05D004799 3.3e-32 141.4 82 70.7
DCAR_004534 Daucus carota HOM05D003542 ORTHO05D004799 3.3e-32 141.4 80 75.0
Lalb_Chr05g0215151 Lupinus albus HOM05D003542 ORTHO05D004799 3.3e-32 141.4 82 72.0
PGR042G1333 Punica granatum HOM05D003542 ORTHO05D004799 3.3e-32 141.4 83 68.7
arahy.Tifrunner.gnm1.ann1.2M3042 Arachis hypogaea HOM05D003542 ORTHO05D004799 4.3e-32 141.0 82 72.0
CANSAT80G0877 Cannabis sativa HOM05D003542 ORTHO05D004799 4.3e-32 141.0 83 71.1
ClCG11G016080 Citrullus lanatus HOM05D003542 ORTHO05D004799 5.6e-32 140.6 82 72.0
MELO3C010524.2 Cucumis melo HOM05D003542 ORTHO05D004799 5.6e-32 140.6 82 72.0
Psat2g145280 Pisum sativum HOM05D003542 ORTHO05D004799 5.6e-32 140.6 80 75.0
Sc07g0007990 Simmondsia chinensis HOM05D003542 ORTHO05D004799 5.6e-32 140.6 82 68.3
TPR.G8991 Trifolium pratense HOM05D003542 ORTHO05D004799 7.4e-32 140.2 82 73.2
Cc08_g05890 Coffea canephora HOM05D003542 ORTHO05D004799 9.6e-32 139.8 82 72.0
PSO502G0023 Papaver somniferum HOM05D003542 ORTHO05D004799 9.6e-32 139.8 82 74.4
PSO675G5456 Papaver somniferum HOM05D003542 ORTHO05D004799 9.6e-32 139.8 83 73.5
Sed0016507 Sechium edule HOM05D003542 ORTHO05D004799 9.6e-32 139.8 82 70.7
THA.LOC104798529 Tarenaya hassleriana HOM05D003542 ORTHO05D004799 1.6e-31 139.0 82 70.7
BcaB02g09412 Brassica carinata HOM05D003542 ORTHO05D004799 2.1e-31 138.7 82 69.5
CsaV3_4G027890 Cucumis sativus L. HOM05D003542 ORTHO05D004799 2.1e-31 138.7 82 70.7
MSTRG.25746 Avicennia marina HOM05D003542 ORTHO05D004799 2.8e-31 138.3 83 71.1
SGA_v2.0_scaffold96G29103 Striga asiatica HOM05D003542 ORTHO05D004799 2.8e-31 138.3 83 69.9
VMungo0251G1439 Vigna mungo HOM05D003542 ORTHO05D004799 2.8e-31 138.3 82 73.2
A04p27010 Brassica napus HOM05D003542 ORTHO05D004799 3.7e-31 137.9 82 69.5
BraA04t18202Z Brassica rapa HOM05D003542 ORTHO05D004799 3.7e-31 137.9 82 69.5
BcaC02g11676 Brassica carinata HOM05D003542 ORTHO05D004799 4.8e-31 137.5 82 69.5
BcaC02g11677 Brassica carinata HOM05D003542 ORTHO05D004799 4.8e-31 137.5 82 69.5
CARHR129800 Cardamine hirsuta HOM05D003542 ORTHO05D004799 4.8e-31 137.5 81 70.4
Sp4g17820 Schrenkiella parvula HOM05D003542 ORTHO05D004799 4.8e-31 137.5 82 69.5
AT2G35610 Arabidopsis thaliana HOM05D003542 ORTHO05D004799 6.2e-31 137.1 82 69.5
Ca_25048_v3 Cicer arietinum L. HOM05D003542 ORTHO05D004799 6.2e-31 137.1 80 71.2
Carub.0004s1730 Capsella rubella HOM05D003542 ORTHO05D004799 8.1e-31 136.7 81 70.4
Cc04_g11590 Coffea canephora HOM05D003542 ORTHO05D004799 8.1e-31 136.7 81 70.4
Lj4g0008068 Lotus japonicus HOM05D003542 ORTHO05D004799 8.1e-31 136.7 82 69.5
Medtr5g025590 Medicago truncatula HOM05D003542 ORTHO05D004799 8.1e-31 136.7 80 72.5
Migut.A00523 Erythranthe guttata HOM05D003542 ORTHO05D004799 1.1e-30 136.3 84 70.2
HanXRQChr17g0537331 Helianthus annuus HOM05D003542 ORTHO05D004799 1.1e-30 136.3 82 70.7
AL4G31650 Arabidopsis lyrata HOM05D003542 ORTHO05D004799 1.4e-30 136.0 82 68.3
Thhalv10016368m.g Eutrema salsugineum HOM05D003542 ORTHO05D004799 1.8e-30 135.6 82 68.3
Lj2g0004183 Lotus japonicus HOM05D003542 ORTHO05D004799 2.4e-30 135.2 80 72.5
Aa31LG9G15750 Aethionema arabicum HOM05D003542 ORTHO05D004799 3.1e-30 134.8 82 65.9
C04p12510 Brassica napus HOM05D003542 ORTHO05D004799 3.1e-30 134.8 82 67.1
BolC4t22898H Brassica oleracea HOM05D003542 ORTHO05D004799 3.1e-30 134.8 82 67.1
BcaC02g07760 Brassica carinata HOM05D003542 ORTHO05D004799 5.3e-30 134.0 82 67.1
C04p64420 Brassica napus HOM05D003542 ORTHO05D004799 5.3e-30 134.0 82 67.1
BolC4t27926H Brassica oleracea HOM05D003542 ORTHO05D004799 5.3e-30 134.0 82 67.1
ATR0568G062 Amborella trichopoda HOM05D003542 ORTHO05D004799 6.9e-30 133.7 84 70.2
FAN18G0768 Fragaria x ananassa HOM05D003542 ORTHO05D004799 1.2e-29 132.9 97 61.9
FAN18G2203 Fragaria x ananassa HOM05D003542 ORTHO05D004799 1.2e-29 132.9 97 61.9
A05p10120 Brassica napus HOM05D003542 ORTHO05D004799 1.5e-29 132.5 82 68.3
BraA05t19953Z Brassica rapa HOM05D003542 ORTHO05D004799 1.5e-29 132.5 82 68.3
Ca_22456_v3 Cicer arietinum L. HOM05D003542 ORTHO05D004799 7.6e-29 130.2 82 67.1
MBI06_g04285_MAGBIO Magnolia biondii HOM05D003542 ORTHO05D018761 1.3e-28 129.4 95 62.1
TPR.G14272 Trifolium pratense HOM05D003542 ORTHO05D004799 2.2e-28 128.6 82 67.1
CDE01G0249 Ceratophyllum demersum HOM05D003542 ORTHO05D004799 1.4e-27 125.9 75 70.7
Medtr8g072310 Medicago truncatula HOM05D003542 ORTHO05D004799 3.2e-27 124.8 80 66.2
Lj8C8T8 Lonicera japonica HOM05D003542 ORTHO05D004799 2.1e-26 122.1 58 81.0
Lalb_Chr16g0391801 Lupinus albus HOM05D003542 ORTHO05D004799 3.5e-26 121.3 81 60.5
Mapoly0019s0126 Marchantia polymorpha HOM05D003542 ORTHO05D004799 3.5e-26 121.3 78 62.8
Lsat_1_v5_gn_3_20301 Lactuca sativa HOM05D003542 ORTHO05D004799 4.6e-26 120.9 85 62.4
Sed0027808 Sechium edule HOM05D003542 ORTHO05D004799 4.6e-26 120.9 74 64.9
SEGI_27818 Sequoiadendron giganteum HOM05D003542 ORTHO05D004799 2.3e-25 118.6 85 57.6
Sabra01G0180200 Salix brachista HOM05D003542 ORTHO05D004799 3.0e-25 118.2 58 82.8
Psat4g107640 Pisum sativum HOM05D003542 ORTHO05D004799 3.9e-25 117.9 80 62.5
COL.COLO4_16751 Corchorus olitorius HOM05D003542 ORTHO05D004799 8.7e-25 116.7 58 79.3
Hund14306 Selenicereus undatus HOM05D003542 ORTHO05D004799 1.5e-24 115.9 57 80.7
SHI32767 Sapria himalayana HOM05D003542 ORTHO05D004799 5.6e-24 114.0 64 70.3
SMO329G0009 Selaginella moellendorffii HOM05D003542 ORTHO05D004799 1.3e-23 112.8 84 53.6
MBI15_g33455_MAGBIO Magnolia biondii HOM05D003542 ORTHO05D004799 2.1e-23 112.1 57 80.7
Ah.12g058430 Amaranthus hybridus HOM05D003542 ORTHO05D004799 6.2e-23 110.5 79 59.5
BcaB06g28849 Brassica carinata HOM05D003542 ORTHO05D018761 2.4e-22 108.6 55 78.2
AUR62030410 Chenopodium quinoa HOM05D003542 ORTHO05D004799 2.4e-22 108.6 59 72.9
EL10Ac5g12587 Beta vulgaris HOM05D003542 ORTHO05D004799 3.1e-22 108.2 82 59.8
SalBow4G0461 Salvia bowleyana HOM05D003542 ORTHO05D004799 3.1e-22 108.2 55 76.4
AUR62010484 Chenopodium quinoa HOM05D003542 ORTHO05D004799 6.9e-22 107.1 59 72.9
THA.LOC104814389 Tarenaya hassleriana HOM05D003542 ORTHO05D004799 3.4e-21 104.8 66 68.2
AagrBONN_evm.TU.Sc2ySwM_344.2406 Anthoceros agrestis HOM05D003542 ORTHO05D004799 5.8e-21 104.0 83 50.6
Pp3c12_18450 Physcomitrium patens HOM05D003542 ORTHO05D004799 1.0e-20 103.2 76 53.9
Cc04_g11580 Coffea canephora HOM05D003542 ORTHO05D004799 1.2e-18 96.3 72 61.1
HPP92_014853 Vanilla planifolia HOM05D003542 ORTHO05D004799 3.9e-17 91.3 57 66.7
Aa31LG2G14340 Aethionema arabicum HOM05D003542 ORTHO05D004799 3.1e-14 81.6 56 62.5
MCO06G136 Micromonas commoda HOM05D003542 ORTHO05D004799 2.2e-12 75.5 67 47.8


User provided reference genes

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