Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.3e-71 273.1 150 100.0
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 3.9e-52 208.4 142 84.5
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 3.6e-50 201.8 145 74.5
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 4.7e-50 201.4 143 76.2
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 2.4e-49 199.1 143 75.5
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 4.0e-49 198.4 144 75.0
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 4.0e-49 198.4 144 72.9
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 5.2e-49 198.0 145 73.1
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 9.0e-49 197.2 143 74.8
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 1.5e-48 196.4 145 71.0
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 2.0e-48 196.1 145 73.1
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 2.0e-48 196.1 145 73.1
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 2.6e-48 195.7 145 70.3
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 3.4e-48 195.3 145 69.7
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 5.8e-48 194.5 146 71.9
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 5.8e-48 194.5 146 71.2
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 5.8e-48 194.5 144 72.2
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 7.6e-48 194.1 145 69.7
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 7.6e-48 194.1 142 73.2
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 7.6e-48 194.1 143 73.4
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 1.3e-47 193.4 145 69.0
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 1.3e-47 193.4 145 69.7
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 1.3e-47 193.4 146 71.9
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 1.3e-47 193.4 146 71.9
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 2.2e-47 192.6 146 69.2
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 3.8e-47 191.8 148 68.9
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 4.9e-47 191.4 145 69.7
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 8.4e-47 190.7 145 69.7
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 1.1e-46 190.3 146 70.5
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 1.4e-46 189.9 144 71.5
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 1.4e-46 189.9 147 68.7
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.4e-46 189.1 145 69.7
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 2.4e-46 189.1 143 69.9
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 3.2e-46 188.7 139 73.4
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 7.1e-46 187.6 143 69.9
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 7.1e-46 187.6 145 69.0
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 7.1e-46 187.6 145 69.0
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 7.1e-46 187.6 145 69.0
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 7.1e-46 187.6 145 69.0
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 1.2e-45 186.8 145 69.0
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 1.6e-45 186.4 142 70.4
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 1.6e-45 186.4 144 70.1
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.1e-45 186.0 144 71.5
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 3.5e-45 185.3 145 68.3
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 6.0e-45 184.5 143 67.8
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 6.0e-45 184.5 143 69.9
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 6.0e-45 184.5 143 69.9
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 1.0e-44 183.7 145 67.6
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 1.0e-44 183.7 140 70.0
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 1.0e-44 183.7 140 70.0
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 1.3e-44 183.3 140 68.6
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 1.7e-44 183.0 146 67.8
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 3.9e-44 181.8 141 68.8
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 5.1e-44 181.4 144 69.4
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 6.6e-44 181.0 143 69.2
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 1.1e-43 180.3 141 68.1
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 1.1e-43 180.3 146 67.8
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 1.1e-43 180.3 140 68.6
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 1.9e-43 179.5 167 63.5
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 1.9e-43 179.5 146 65.8
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 2.5e-43 179.1 143 66.4
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 2.5e-43 179.1 136 70.6
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 3.3e-43 178.7 144 66.0
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 3.3e-43 178.7 140 69.3
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 4.3e-43 178.3 144 66.0
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 4.3e-43 178.3 144 65.3
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 4.3e-43 178.3 144 66.0
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 7.3e-43 177.6 145 66.2
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 9.6e-43 177.2 145 65.5
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 1.3e-42 176.8 144 65.3
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 1.3e-42 176.8 144 65.3
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 1.3e-42 176.8 145 66.2
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 1.6e-42 176.4 144 64.6
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 2.1e-42 176.0 144 64.6
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 2.1e-42 176.0 144 64.6
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 2.1e-42 176.0 144 65.3
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 2.8e-42 175.6 144 65.3
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 2.8e-42 175.6 140 65.0
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 4.8e-42 174.9 146 65.1
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 6.2e-42 174.5 144 64.6
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 3.1e-41 172.2 145 65.5
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 3.1e-41 172.2 142 65.5
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 3.1e-41 172.2 144 65.3
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 1.5e-40 169.9 144 63.9
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 1.5e-40 169.9 125 72.8
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 2.6e-40 169.1 145 64.8
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 9.9e-40 167.2 145 62.8
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 1.7e-39 166.4 144 63.9
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 1.6e-37 159.8 145 60.7
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 1.3e-36 156.8 145 63.4
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 2.3e-36 156.0 144 61.8
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 1.1e-35 153.7 143 62.2
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 7.4e-35 151.0 144 59.0
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 1.6e-34 149.8 112 69.6
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 4.8e-34 148.3 142 56.3
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 6.2e-34 147.9 89 93.3
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 1.1e-33 147.1 144 59.0
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 1.4e-33 146.7 145 57.9
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 1.8e-33 146.4 137 56.9
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 1.8e-33 146.4 144 59.7
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 2.4e-33 146.0 111 68.5
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 4.0e-33 145.2 138 55.8
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 5.3e-33 144.8 144 52.1
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 3.4e-32 142.1 110 67.3
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 7.6e-32 141.0 220 44.1
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 1.4e-30 136.7 108 66.7
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 1.4e-30 136.7 108 72.2
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 2.1e-29 132.9 145 54.5
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 1.0e-28 130.6 101 66.3
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 2.3e-28 129.4 104 66.3
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 3.0e-28 129.0 145 53.8
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 1.9e-27 126.3 131 53.4
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 9.6e-27 124.0 111 58.6
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 9.6e-27 124.0 143 53.1
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 1.6e-26 123.2 110 63.6
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 2.4e-25 119.4 150 50.7
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 1.4e-22 110.2 143 49.0
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 7.1e-22 107.8 84 69.0
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 1.3e-18 97.1 143 44.8
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 1.3e-18 97.1 143 44.8
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 2.8e-18 95.9 79 67.1
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 6.9e-17 91.3 125 47.2
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 3.8e-15 85.5 66 66.7
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 7.9e-13 77.8 137 39.4
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 1.7e-10 70.1 134 34.3
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 3.7e-10 68.9 46 73.9
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 5.3e-09 65.1 53 60.4
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 1.3e-07 60.5 46 60.9
CDE07G1246 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 4.2e-06 55.5 29 82.8


User provided reference genes

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