Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2982 Ceratophyllum demersum HOM05D007274 ORTHO05D009194 1.3e-32 142.5 72 100.0
Migut.D02299 Erythranthe guttata HOM05D007274 ORTHO05D009194 1.5e-22 109.0 65 75.4
ECA248G0925 Erigeron canadensis HOM05D007274 ORTHO05D009194 2.0e-22 108.6 64 78.1
Ah.01g004810 Amaranthus hybridus HOM05D007274 ORTHO05D009194 2.6e-22 108.2 65 75.4
HanXRQChr11g0346021 Helianthus annuus HOM05D007274 ORTHO05D009194 4.5e-22 107.5 64 78.1
Hund00829 Selenicereus undatus HOM05D007274 ORTHO05D009194 1.0e-21 106.3 64 75.0
Sc06g0006140 Simmondsia chinensis HOM05D007274 ORTHO05D009194 1.0e-21 106.3 64 76.6
SGA_v2.0_scaffold277G46704 Striga asiatica HOM05D007274 ORTHO05D009194 1.0e-21 106.3 64 78.1
DCAR_022681 Daucus carota HOM05D007274 ORTHO05D009194 1.3e-21 105.9 64 73.4
SalBow6G3121 Salvia bowleyana HOM05D007274 ORTHO05D009194 2.2e-21 105.1 65 73.8
MBI04_g08417_MAGBIO Magnolia biondii HOM05D007274 ORTHO05D009194 2.9e-21 104.8 72 70.8
Oeu007727.1 Olea europaea HOM05D007274 ORTHO05D009194 3.8e-21 104.4 64 73.4
EL10Ac9g21016 Beta vulgaris HOM05D007274 ORTHO05D009194 5.0e-21 104.0 64 73.4
AUR62024013 Chenopodium quinoa HOM05D007274 ORTHO05D009194 5.0e-21 104.0 64 73.4
AUR62041328 Chenopodium quinoa HOM05D007274 ORTHO05D009194 5.0e-21 104.0 64 73.4
Os04g0165500 Oryza sativa ssp. japonica HOM05D007274 ORTHO05D009194 5.0e-21 104.0 70 74.3
unitig_899.g15364 Utricularia gibba HOM05D000376 ORTHO05D000237 6.5e-21 103.6 65 73.8
Actinidia07190 Actinidia chinensis HOM05D007274 ORTHO05D009194 8.4e-21 103.2 71 71.8
Thecc.09G297800 Theobroma cacao HOM05D007274 ORTHO05D009194 1.1e-20 102.8 64 78.1
Nitab4.5_0000173g0170 Nicotiana tabacum HOM05D007274 ORTHO05D009194 1.9e-20 102.1 65 75.4
COL.COLO4_19207 Corchorus olitorius HOM05D007274 ORTHO05D009194 2.5e-20 101.7 70 70.0
Lsat_1_v5_gn_1_64881 Lactuca sativa HOM05D007274 ORTHO05D009194 3.2e-20 101.3 65 72.3
Peaxi162Scf00983g00003 Petunia axillaris HOM05D007274 ORTHO05D009194 3.2e-20 101.3 65 73.8
vmacro03251 Vaccinium macrocarpon HOM05D007274 ORTHO05D009194 3.2e-20 101.3 65 73.8
Rhsim13G0101200 Rhododendron simsii HOM05D007274 ORTHO05D009194 4.2e-20 100.9 65 72.3
Rhsim13G0101500 Rhododendron simsii HOM05D007274 ORTHO05D009194 4.2e-20 100.9 65 72.3
arahy.Tifrunner.gnm1.ann1.BZT54Z Arachis hypogaea HOM05D007274 ORTHO05D009194 5.5e-20 100.5 70 70.0
arahy.Tifrunner.gnm1.ann1.F7FWRZ Arachis hypogaea HOM05D007274 ORTHO05D009194 5.5e-20 100.5 70 70.0
Manes.04G012400 Manihot esculenta HOM05D007274 ORTHO05D009194 5.5e-20 100.5 65 73.8
Solyc11g066450.2 Solanum lycopersicum HOM05D007274 ORTHO05D009194 5.5e-20 100.5 65 73.8
Sopen11g026200 Solanum pennellii HOM05D007274 ORTHO05D009194 5.5e-20 100.5 65 73.8
PGSC0003DMG401000458 Solanum tuberosum HOM05D007274 ORTHO05D009194 5.5e-20 100.5 65 73.8
Ciclev10029644m.g Citrus clementina HOM05D007274 ORTHO05D009194 7.1e-20 100.1 64 75.0
Potri.004G217300 Populus trichocarpa HOM05D007274 ORTHO05D009194 7.1e-20 100.1 64 76.6
PGR102G1958 Punica granatum HOM05D007274 ORTHO05D009194 7.1e-20 100.1 64 75.0
Sabra04G0148000 Salix brachista HOM05D007274 ORTHO05D009194 7.1e-20 100.1 64 76.6
Cc01_g10210 Coffea canephora HOM05D007274 ORTHO05D009194 9.3e-20 99.8 65 73.8
Nitab4.5_0009628g0020 Nicotiana tabacum HOM05D007274 ORTHO05D009194 1.2e-19 99.4 65 73.8
HPP92_002407 Vanilla planifolia HOM05D007274 ORTHO05D009194 1.2e-19 99.4 70 67.1
C02p11370 Brassica napus HOM05D007274 ORTHO05D009194 1.6e-19 99.0 68 67.6
Duzib150G1296 Durio zibethinus HOM05D007274 ORTHO05D009194 2.7e-19 98.2 64 75.0
Duzib150G1526 Durio zibethinus HOM05D007274 ORTHO05D009194 2.7e-19 98.2 64 75.0
ATR0043G009 Amborella trichopoda HOM05D007274 ORTHO05D009194 4.6e-19 97.4 72 65.3
BNapus_Darmor_BZH_scaffold_38p00270 Brassica napus HOM05D007274 ORTHO05D009194 4.6e-19 97.4 68 66.2
CSS0018211 Camellia sinensis var. sinensis HOM05D007274 ORTHO05D009194 6.1e-19 97.1 64 71.9
CSS0039770 Camellia sinensis var. sinensis HOM05D007274 ORTHO05D009194 6.1e-19 97.1 65 70.8
Nn2g13873 Nelumbo nucifera HOM05D007274 ORTHO05D009194 6.1e-19 97.1 64 73.4
A10p18160 Brassica napus HOM05D007274 ORTHO05D009194 7.9e-19 96.7 64 71.9
BraA10t43891Z Brassica rapa HOM05D007274 ORTHO05D009194 7.9e-19 96.7 64 71.9
Sed0003405 Sechium edule HOM05D007274 ORTHO05D009194 7.9e-19 96.7 64 70.3
Carub.0006s2065 Capsella rubella HOM05D007274 ORTHO05D009194 1.0e-18 96.3 64 70.3
CAN.G546.54 Capsicum annuum HOM05D007274 ORTHO05D009194 1.0e-18 96.3 65 70.8
BraA02t05697Z Brassica rapa HOM05D007274 ORTHO05D009194 1.3e-18 95.9 68 66.2
Cpa.g.sc47.5 Carica papaya HOM05D007274 ORTHO05D009194 1.8e-18 95.5 64 70.3
Cfa010139 Carpinus fangiana HOM05D007274 ORTHO05D009194 1.8e-18 95.5 64 70.3
ClCG02G021670 Citrullus lanatus HOM05D007274 ORTHO05D009194 1.8e-18 95.5 64 70.3
Glyma.12G082200 Glycine max HOM05D007274 ORTHO05D009194 1.8e-18 95.5 70 64.3
Gohir.D09G062900 Gossypium hirsutum HOM05D007274 ORTHO05D009194 1.8e-18 95.5 64 71.9
Gorai.006G077700 Gossypium raimondii HOM05D007274 ORTHO05D009194 1.8e-18 95.5 64 71.9
Medtr4g057190 Medicago truncatula HOM05D007274 ORTHO05D009194 2.3e-18 95.1 70 64.3
Atru.chr3.3502 Acer truncatum HOM05D007274 ORTHO05D009194 3.0e-18 94.7 57 78.9
CSS0045495 Camellia sinensis var. sinensis HOM05D007274 ORTHO05D009194 3.0e-18 94.7 71 64.8
PSO384G1249 Papaver somniferum HOM05D007274 ORTHO05D009194 3.0e-18 94.7 62 71.0
BcaB05g22677 Brassica carinata HOM05D007274 ORTHO05D009194 3.9e-18 94.4 64 68.8
BcaB08g36400 Brassica carinata HOM05D007274 ORTHO05D009194 3.9e-18 94.4 64 68.8
BcaC04g19606 Brassica carinata HOM05D007274 ORTHO05D009194 3.9e-18 94.4 64 68.8
C09p53770 Brassica napus HOM05D007274 ORTHO05D009194 3.9e-18 94.4 64 68.8
BolC9t58252H Brassica oleracea HOM05D007274 ORTHO05D009194 3.9e-18 94.4 64 68.8
CSS0014818 Camellia sinensis var. sinensis HOM05D007274 ORTHO05D009194 3.9e-18 94.4 71 64.8
CARHR190660 Cardamine hirsuta HOM05D007274 ORTHO05D009194 3.9e-18 94.4 64 68.8
CiPaw.14G106900 Carya illinoinensis HOM05D007274 ORTHO05D009194 3.9e-18 94.4 70 64.3
Haze_23527 Corylus avellana HOM05D007274 ORTHO05D009194 3.9e-18 94.4 64 67.2
Thhalv10015213m.g Eutrema salsugineum HOM05D007274 ORTHO05D009194 3.9e-18 94.4 64 68.8
Psat7g223680 Pisum sativum HOM05D007274 ORTHO05D009194 3.9e-18 94.4 70 62.9
Sp6g22530 Schrenkiella parvula HOM05D007274 ORTHO05D009194 3.9e-18 94.4 64 68.8
TPR.G36741 Trifolium pratense HOM05D007274 ORTHO05D009194 3.9e-18 94.4 70 64.3
Aqoxy1G01060 Aquilegia oxysepala HOM05D007274 ORTHO05D009194 5.1e-18 94.0 72 61.1
Gohir.A09G064000 Gossypium hirsutum HOM05D007274 ORTHO05D009194 5.1e-18 94.0 64 70.3
AT5G22875 Arabidopsis thaliana HOM05D007274 ORTHO05D009194 6.7e-18 93.6 64 67.2
CANSAT64G0704 Cannabis sativa HOM05D007274 ORTHO05D009194 6.7e-18 93.6 64 68.8
Lalb_Chr19g0136881 Lupinus albus HOM05D007274 ORTHO05D009194 6.7e-18 93.6 64 70.3
QL01p014890 Quercus lobata HOM05D007274 ORTHO05D009194 6.7e-18 93.6 64 68.8
MD03G1128500 Malus domestica HOM05D007274 ORTHO05D009194 8.7e-18 93.2 64 70.3
Phvul.005G069100 Phaseolus vulgaris HOM05D007274 ORTHO05D009194 8.7e-18 93.2 70 61.4
Phvul.011G086800 Phaseolus vulgaris HOM05D007274 ORTHO05D009194 8.7e-18 93.2 70 61.4
Lj3g0015703 Lotus japonicus HOM05D007274 ORTHO05D009194 1.1e-17 92.8 64 67.2
GSVIVG01031456001 Vitis vinifera HOM05D007274 ORTHO05D009194 1.1e-17 92.8 70 64.3
AL6G34010 Arabidopsis lyrata HOM05D007274 ORTHO05D009194 1.5e-17 92.4 64 65.6
Ca_10763_v3 Cicer arietinum L. HOM05D007274 ORTHO05D009194 1.5e-17 92.4 70 62.9
Prupe.6G113700 Prunus persica HOM05D007274 ORTHO05D009194 1.9e-17 92.0 64 70.3
Aa31LG1G12850 Aethionema arabicum HOM05D007274 ORTHO05D009194 4.3e-17 90.9 64 65.6
THA.LOC109116051 Tarenaya hassleriana HOM05D007274 ORTHO05D009194 4.3e-17 90.9 64 67.2
Nn5g27554 Nelumbo nucifera HOM05D007274 ORTHO05D009194 5.7e-17 90.5 64 68.8
RcHm_v2.0_Chr5g0056551 Rosa chinensis HOM05D007274 ORTHO05D009194 5.7e-17 90.5 64 67.2
FAN16G2799 Fragaria x ananassa HOM05D007274 ORTHO05D009194 7.4e-17 90.1 64 67.2
FAN21G0952 Fragaria x ananassa HOM05D007274 ORTHO05D009194 9.7e-17 89.7 64 65.6
SEGI_23633 Sequoiadendron giganteum HOM05D007274 ORTHO05D009194 1.3e-16 89.4 64 65.6
FvH4_3g30550 Fragaria vesca HOM05D007274 ORTHO05D009194 1.6e-16 89.0 64 65.6
FAN11G1565 Fragaria x ananassa HOM05D007274 ORTHO05D009194 1.6e-16 89.0 64 65.6
Glyma.11G192200 Glycine max HOM05D007274 ORTHO05D009194 1.6e-16 89.0 63 66.7
Haze_23532 Corylus avellana HOM05D007274 ORTHO05D009194 1.4e-15 85.9 64 64.1
Haze_08394 Corylus avellana HOM05D007274 ORTHO05D009194 5.3e-15 84.0 74 55.4
Mapoly0009s0144 Marchantia polymorpha HOM05D007274 ORTHO05D009194 4.5e-14 80.9 62 62.9
Pp3c6_6370 Physcomitrium patens HOM05D007274 ORTHO05D009194 4.2e-12 74.3 65 58.5
MD11G1149300 Malus domestica HOM05D007274 ORTHO05D009194 3.0e-10 68.2 51 66.7
TAR369G0919 Trochodendron aralioides HOM05D007274 ORTHO05D009194 3.9e-10 67.8 39 71.8
Lsat_1_v5_gn_1_64921 Lactuca sativa HOM05D007274 ORTHO05D009194 2.5e-09 65.1 57 56.1
SHI06197 Sapria himalayana HOM05D005377 ORTHO05D003034 4.1e-07 57.8 70 44.3


User provided reference genes

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