Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 2.1e-140 502.3 246 100.0
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 1.6e-71 273.5 232 59.1
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 1.4e-59 233.8 253 50.2
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 1.8e-59 233.4 230 50.4
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 2.4e-59 233.0 245 51.8
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 7.8e-58 228.0 244 51.2
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 1.2e-55 220.7 235 49.4
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 1.6e-55 220.3 239 50.6
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 1.6e-55 220.3 234 51.3
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 3.6e-55 219.2 254 49.2
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 3.6e-55 219.2 232 48.7
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 6.2e-55 218.4 253 48.2
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 1.4e-54 217.2 235 50.6
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 4.0e-54 215.7 232 47.4
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 6.8e-54 214.9 237 50.2
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 8.9e-54 214.5 235 48.9
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 8.9e-54 214.5 235 48.9
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 1.2e-53 214.2 238 50.8
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 1.2e-53 214.2 236 48.3
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 1.5e-53 213.8 230 51.7
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 1.5e-53 213.8 232 47.8
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 2.6e-53 213.0 247 46.2
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 3.4e-53 212.6 240 49.6
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 3.4e-53 212.6 239 49.0
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 3.4e-53 212.6 254 46.5
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 7.5e-53 211.5 256 47.3
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 9.8e-53 211.1 244 49.2
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 2.2e-52 209.9 232 49.6
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 2.2e-52 209.9 239 49.4
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 2.2e-52 209.9 248 46.0
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 3.7e-52 209.1 235 48.5
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 1.9e-51 206.8 255 46.3
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 1.9e-51 206.8 239 47.7
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 3.2e-51 206.1 244 46.7
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 5.4e-51 205.3 249 44.2
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 5.4e-51 205.3 256 46.1
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 9.2e-51 204.5 259 45.6
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 1.2e-50 204.1 259 45.6
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 1.6e-50 203.8 251 45.0
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 1.6e-50 203.8 232 45.7
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 2.0e-50 203.4 236 46.6
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 1.7e-49 200.3 235 48.9
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 1.7e-49 200.3 233 46.8
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 2.3e-49 199.9 232 46.1
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 3.0e-49 199.5 259 45.6
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 3.0e-49 199.5 214 49.5
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 6.6e-49 198.4 235 46.0
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 1.5e-48 197.2 251 45.8
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 1.9e-48 196.8 236 45.8
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 3.3e-48 196.1 231 44.6
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 4.3e-48 195.7 257 45.5
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 9.5e-48 194.5 232 44.8
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 1.6e-47 193.7 236 44.9
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 2.1e-47 193.4 243 44.0
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 3.6e-47 192.6 203 50.7
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 8.1e-47 191.4 232 44.4
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 1.4e-46 190.7 230 44.8
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 1.4e-46 190.7 239 44.8
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 1.8e-46 190.3 234 44.9
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 3.1e-46 189.5 233 43.8
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 6.8e-46 188.3 257 42.8
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 2.0e-45 186.8 249 41.0
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 2.6e-45 186.4 234 42.3
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 3.4e-45 186.0 234 42.7
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 9.8e-45 184.5 241 41.5
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.4e-43 180.6 203 49.3
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 1.4e-43 180.6 201 49.8
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 3.2e-43 179.5 231 42.4
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 2.1e-42 176.8 231 42.4
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 2.1e-42 176.8 237 42.2
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 2.7e-42 176.4 203 49.3
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 1.0e-41 174.5 313 36.4
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 1.7e-41 173.7 253 40.3
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 1.7e-41 173.7 253 40.3
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 1.7e-41 173.7 253 40.3
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 1.5e-40 170.6 233 43.8
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 7.3e-40 168.3 232 40.9
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 1.2e-39 167.5 167 53.3
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 2.1e-39 166.8 256 38.3
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 2.3e-38 163.3 256 38.7
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 4.0e-38 162.5 197 47.7
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 4.0e-38 162.5 200 44.0
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 5.4e-35 152.1 181 48.6
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 3.0e-33 146.4 142 50.0
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 8.6e-33 144.8 234 41.0
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 8.6e-33 144.8 187 47.1
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 1.5e-32 144.1 227 37.4
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 9.6e-32 141.4 250 37.2
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 8.1e-31 138.3 232 35.8
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.1e-30 137.9 250 37.6
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 1.8e-30 137.1 325 32.6
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 2.0e-29 133.7 246 36.2
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 4.4e-29 132.5 203 35.5
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 1.7e-28 130.6 175 41.7
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 2.7e-26 123.2 164 43.9
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 4.0e-22 109.4 236 33.5
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 1.0e-17 94.7 228 29.8
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 7.4e-16 88.6 264 28.0
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 2.8e-15 86.7 145 41.4
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 5.3e-14 82.4 139 38.1
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 2.9e-12 76.6 119 38.7
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 7.9e-10 68.6 193 30.6
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 3.1e-06 56.6 96 38.5
CBR_g39524 Chara braunii HOM05D000601 ORTHO05D000407 6.9e-06 55.5 126 31.7


User provided reference genes

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