Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 6.4e-35 150.2 77 100.0
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 1.4e-26 122.5 68 86.8
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 1.9e-26 122.1 68 88.2
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 1.9e-26 122.1 68 88.2
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 7.1e-26 120.2 68 86.8
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 9.3e-26 119.8 68 85.3
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 9.3e-26 119.8 68 83.8
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 1.2e-25 119.4 68 85.3
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 1.6e-25 119.0 68 85.3
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 1.6e-25 119.0 68 85.3
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 2.7e-25 118.2 69 81.2
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 4.6e-25 117.5 67 85.1
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 4.6e-25 117.5 68 83.8
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 6.0e-25 117.1 67 85.1
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 6.0e-25 117.1 68 82.4
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 6.0e-25 117.1 68 83.8
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 7.9e-25 116.7 68 83.8
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 7.9e-25 116.7 68 83.8
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 7.9e-25 116.7 68 85.3
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 7.9e-25 116.7 68 83.8
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 1.0e-24 116.3 68 82.4
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 1.0e-24 116.3 68 82.4
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 1.0e-24 116.3 68 82.4
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 1.0e-24 116.3 68 82.4
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 1.0e-24 116.3 68 83.8
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 1.3e-24 115.9 68 83.8
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 1.3e-24 115.9 68 82.4
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 1.3e-24 115.9 68 77.9
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 1.3e-24 115.9 68 77.9
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 1.3e-24 115.9 68 80.9
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 1.8e-24 115.5 67 82.1
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 1.8e-24 115.5 68 82.4
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 1.8e-24 115.5 67 83.6
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 1.8e-24 115.5 68 82.4
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 2.3e-24 115.2 68 82.4
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.3e-24 115.2 68 83.8
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 2.3e-24 115.2 67 80.6
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 3.0e-24 114.8 68 82.4
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 3.0e-24 114.8 68 76.5
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 3.0e-24 114.8 68 77.9
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 3.9e-24 114.4 68 80.9
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 3.9e-24 114.4 68 77.9
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 3.9e-24 114.4 68 80.9
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 3.9e-24 114.4 68 80.9
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 3.9e-24 114.4 68 77.9
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 5.1e-24 114.0 68 82.4
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 6.7e-24 113.6 68 82.4
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 6.7e-24 113.6 67 80.6
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 6.7e-24 113.6 68 80.9
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 6.7e-24 113.6 68 79.4
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 6.7e-24 113.6 67 80.6
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 8.7e-24 113.2 68 82.4
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 8.7e-24 113.2 68 79.4
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 8.7e-24 113.2 68 82.4
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 1.1e-23 112.8 70 74.3
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 1.5e-23 112.5 68 80.9
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 1.5e-23 112.5 68 75.0
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 1.9e-23 112.1 68 77.9
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 1.9e-23 112.1 68 80.9
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 1.9e-23 112.1 68 82.4
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 1.9e-23 112.1 68 82.4
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 1.9e-23 112.1 68 82.4
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 3.3e-23 111.3 68 79.4
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 3.3e-23 111.3 68 77.9
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 4.3e-23 110.9 68 79.4
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 4.3e-23 110.9 68 79.4
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 4.3e-23 110.9 68 76.5
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 4.3e-23 110.9 68 77.9
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 4.3e-23 110.9 68 77.9
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 5.7e-23 110.5 69 75.4
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 7.4e-23 110.2 68 77.9
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 9.6e-23 109.8 68 75.0
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 9.6e-23 109.8 68 76.5
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 9.6e-23 109.8 68 75.0
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 9.6e-23 109.8 68 73.5
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 1.3e-22 109.4 68 76.5
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 1.3e-22 109.4 68 79.4
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 1.6e-22 109.0 68 79.4
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 2.1e-22 108.6 68 76.5
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 2.1e-22 108.6 68 79.4
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 2.8e-22 108.2 67 76.1
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 1.4e-21 105.9 68 75.0
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 3.1e-21 104.8 68 76.5
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 5.3e-21 104.0 60 83.3
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 1.2e-20 102.8 68 67.6
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 2.6e-20 101.7 69 72.5
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 2.6e-20 101.7 69 66.7
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 3.4e-20 101.3 68 76.5
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 1.3e-19 99.4 68 75.0
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 3.8e-19 97.8 68 67.6
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 8.5e-19 96.7 55 83.6
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 2.1e-17 92.0 57 77.2
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 7.9e-17 90.1 54 83.3
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 1.0e-16 89.7 67 64.2
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 1.3e-16 89.4 57 71.9
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 2.5e-15 85.1 55 74.5
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 3.3e-15 84.7 68 64.7
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 5.7e-15 84.0 67 58.2
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 5.7e-15 84.0 67 61.2
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 5.7e-15 84.0 68 57.4
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 1.6e-14 82.4 68 58.8
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 3.7e-14 81.3 68 55.9
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 3.1e-13 78.2 68 52.9
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 6.9e-13 77.0 45 80.0
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 6.9e-13 77.0 45 80.0
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 2.6e-12 75.1 68 51.5
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 1.0e-11 73.2 46 78.3
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 1.3e-11 72.8 45 80.0
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 2.5e-10 68.6 44 75.0
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 2.1e-09 65.5 44 72.7
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 1.5e-07 59.3 66 43.9
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 1.3e-06 56.2 65 43.1


User provided reference genes

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