Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2909 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 7.1e-267 923.3 452 100.0
TAR605G0002 Trochodendron aralioides HOM05D005685 ORTHO05D007046 2.8e-106 389.8 535 42.2
Nn1g00647 Nelumbo nucifera HOM05D005685 ORTHO05D007046 4.1e-105 386.0 532 42.1
PSO063G4015 Papaver somniferum HOM05D005685 ORTHO05D007046 3.0e-100 369.8 521 43.2
PSO782G3742 Papaver somniferum HOM05D005685 ORTHO05D007046 9.8e-99 364.8 521 42.2
Dinv13349 Davidia involucrata HOM05D005685 ORTHO05D007046 1.2e-93 347.8 328 52.7
ATR0665G442 Amborella trichopoda HOM05D005685 ORTHO05D007046 8.0e-93 345.1 305 57.0
GSVIVG01014072001 Vitis vinifera HOM05D005685 ORTHO05D007046 6.8e-92 342.0 465 42.6
SMO351G0414 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 2.2e-90 337.0 449 44.5
Aqoxy4G01266 Aquilegia oxysepala HOM05D005685 ORTHO05D007046 1.8e-89 334.0 535 39.1
Haze_08449 Corylus avellana HOM05D005685 ORTHO05D007046 2.4e-89 333.6 529 39.1
Prupe.4G154100 Prunus persica HOM05D005685 ORTHO05D007046 5.9e-88 328.9 496 39.5
Lj1C822G13 Lonicera japonica HOM05D005685 ORTHO05D007046 1.0e-87 328.2 352 49.4
RhsimUnG0165000 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.3e-87 327.8 526 36.9
RhsimUnG0060100 Rhododendron simsii HOM05D005685 ORTHO05D007046 3.3e-86 323.2 353 47.3
CSS0007667 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 5.6e-86 322.4 348 48.0
CSS0011531 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 5.6e-86 322.4 348 48.0
Hma1.2p1_0713F.1_g207810 Hydrangea macrophylla HOM05D005685 ORTHO05D007046 7.3e-86 322.0 326 50.3
Actinidia12613 Actinidia chinensis HOM05D005685 ORTHO05D007046 1.2e-85 321.2 348 48.9
Pp3c20_21160 Physcomitrium patens HOM05D005685 ORTHO05D007046 1.4e-84 317.8 324 51.2
RhsimUnG0224400 Rhododendron simsii HOM05D005685 ORTHO05D007046 3.4e-83 313.2 325 49.2
CiPaw.11G154400 Carya illinoinensis HOM05D005685 ORTHO05D007046 3.2e-81 306.6 325 50.5
ClCG11G017070 Citrullus lanatus HOM05D005685 ORTHO05D007046 2.0e-80 303.9 528 36.7
Medtr8g461480 Medicago truncatula HOM05D005685 ORTHO05D007046 2.0e-80 303.9 530 36.4
Potri.001G380900 Populus trichocarpa HOM05D005685 ORTHO05D007046 3.5e-80 303.1 537 35.9
Cpa.g.sc77.65 Carica papaya HOM05D005685 ORTHO05D007046 4.6e-80 302.8 510 37.6
Sed0016294 Sechium edule HOM05D005685 ORTHO05D007046 4.6e-80 302.8 526 37.6
Cc05_g10550 Coffea canephora HOM05D005685 ORTHO05D007046 7.8e-80 302.0 333 46.8
AagrBONN_evm.TU.Sc2ySwM_228.1006 Anthoceros agrestis HOM05D005685 ORTHO05D007046 1.3e-79 301.2 323 52.3
SalBow8G2073 Salvia bowleyana HOM05D005685 ORTHO05D007046 3.9e-79 299.7 324 48.5
MD11G1273300 Malus domestica HOM05D005685 ORTHO05D007046 8.6e-79 298.5 319 48.9
CsaV3_4G032730 Cucumis sativus L. HOM05D005685 ORTHO05D007046 1.1e-78 298.1 531 36.7
MSTRG.14992 Avicennia marina HOM05D005685 ORTHO05D007046 4.3e-78 296.2 324 46.3
DCAR_017584 Daucus carota HOM05D005685 ORTHO05D007046 4.3e-78 296.2 529 36.7
Glyma.15G211900 Glycine max HOM05D005685 ORTHO05D007046 4.3e-78 296.2 303 49.8
Sabra16G0251100 Salix brachista HOM05D005685 ORTHO05D007046 9.5e-78 295.0 432 41.9
Atru.chr2.1911 Acer truncatum HOM05D005685 ORTHO05D007046 1.2e-77 294.7 528 36.9
Lalb_Chr19g0133681 Lupinus albus HOM05D005685 ORTHO05D007046 1.2e-77 294.7 529 35.2
Ciclev10019120m.g Citrus clementina HOM05D005685 ORTHO05D007046 6.2e-77 292.4 368 45.1
Phvul.011G173500 Phaseolus vulgaris HOM05D005685 ORTHO05D007046 8.0e-77 292.0 534 34.5
Psat4g139160 Pisum sativum HOM05D005685 ORTHO05D007046 1.1e-76 291.6 527 35.1
Manes.03G084500 Manihot esculenta HOM05D005685 ORTHO05D007046 1.4e-76 291.2 413 41.2
VMungo1127G1789 Vigna mungo HOM05D005685 ORTHO05D007046 1.8e-76 290.8 378 42.1
Mapoly0011s0171 Marchantia polymorpha HOM05D005685 ORTHO05D007046 4.0e-76 289.7 313 48.6
CANSAT56G0504 Cannabis sativa HOM05D005685 ORTHO05D007046 1.2e-75 288.1 303 49.5
Lj1g0015970 Lotus japonicus HOM05D005685 ORTHO05D007046 1.5e-75 287.7 302 48.0
arahy.Tifrunner.gnm1.ann1.TIF1LK Arachis hypogaea HOM05D005685 ORTHO05D007046 2.0e-75 287.3 329 48.6
SEGI_25985 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 2.0e-75 287.3 300 50.3
TPR.G16474 Trifolium pratense HOM05D005685 ORTHO05D007046 3.4e-75 286.6 315 49.8
Peaxi162Scf00111g01236 Petunia axillaris HOM05D005685 ORTHO05D007046 4.4e-75 286.2 528 35.2
Potri.011G102100 Populus trichocarpa HOM05D005685 ORTHO05D007046 9.8e-75 285.0 328 47.3
CAN.G375.61 Capsicum annuum HOM05D005685 ORTHO05D007046 1.7e-74 284.3 324 47.2
arahy.Tifrunner.gnm1.ann1.4M0U4E Arachis hypogaea HOM05D005685 ORTHO05D007046 2.2e-74 283.9 315 48.9
Lsat_1_v5_gn_5_126281 Lactuca sativa HOM05D005685 ORTHO05D007046 2.9e-74 283.5 397 39.5
PGR031G3876 Punica granatum HOM05D005685 ORTHO05D007046 2.4e-73 280.4 327 45.9
Sc03g0010780 Simmondsia chinensis HOM05D005685 ORTHO05D007046 3.2e-73 280.0 323 46.7
Aa31LG7G1870 Aethionema arabicum HOM05D005685 ORTHO05D007046 4.1e-73 279.6 493 35.1
Zm00001eb004590 Zea mays HOM05D005685 ORTHO05D007046 5.4e-73 279.3 501 34.7
Sabra11G0083400 Salix brachista HOM05D005685 ORTHO05D007046 7.0e-73 278.9 343 44.9
Sopen07g030310 Solanum pennellii HOM05D005685 ORTHO05D007046 1.0e-71 275.0 321 46.1
Solyc07g062050.3 Solanum lycopersicum HOM05D005685 ORTHO05D007046 1.3e-71 274.6 321 46.1
Thhalv10018251m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 2.3e-71 273.9 481 36.2
vmacro11986 Vaccinium macrocarpon HOM05D005685 ORTHO05D007046 1.5e-70 271.2 262 53.1
THA.LOC104808083 Tarenaya hassleriana HOM05D005685 ORTHO05D007046 1.2e-69 268.1 328 44.2
Aa31LG4G2430 Aethionema arabicum HOM05D005685 ORTHO05D007046 1.6e-69 267.7 463 37.8
Sp5g33630 Schrenkiella parvula HOM05D005685 ORTHO05D007046 2.1e-69 267.3 493 34.9
CARHR072030 Cardamine hirsuta HOM05D005685 ORTHO05D007046 4.7e-69 266.2 492 35.0
Sp1g15160 Schrenkiella parvula HOM05D005685 ORTHO05D007046 8.1e-69 265.4 340 43.2
SGA_v2.0_scaffold73G24373 Striga asiatica HOM05D005685 ORTHO05D007046 1.8e-68 264.2 300 45.3
COL.COLO4_17454 Corchorus olitorius HOM05D005685 ORTHO05D007046 2.3e-68 263.8 336 44.9
FAN11G3672 Fragaria x ananassa HOM05D005685 ORTHO05D007046 2.3e-68 263.8 329 44.1
FvH4_3g17370 Fragaria vesca HOM05D005685 ORTHO05D007046 3.1e-68 263.5 329 44.1
Migut.M00685 Erythranthe guttata HOM05D005685 ORTHO05D007046 4.0e-68 263.1 289 48.1
FAN16G1001 Fragaria x ananassa HOM05D005685 ORTHO05D007046 5.2e-68 262.7 329 43.8
MELO3C016678.2 Cucumis melo HOM05D005685 ORTHO05D007046 2.0e-67 260.8 601 31.8
Gohir.A11G290000 Gossypium hirsutum HOM05D005685 ORTHO05D007046 2.0e-67 260.8 328 45.4
HanXRQChr10g0305611 Helianthus annuus HOM05D005685 ORTHO05D007046 2.0e-67 260.8 298 46.6
AT1G17040 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 3.4e-67 260.0 471 36.7
BolC5t30242H Brassica oleracea HOM05D005685 ORTHO05D007046 3.4e-67 260.0 296 47.0
C05p15360 Brassica napus HOM05D005685 ORTHO05D007046 7.5e-67 258.8 296 47.0
A06p12940 Brassica napus HOM05D005685 ORTHO05D007046 2.2e-66 257.3 296 46.6
BraA06t24453Z Brassica rapa HOM05D005685 ORTHO05D007046 6.4e-66 255.8 296 46.3
Thhalv10006979m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 6.4e-66 255.8 359 41.8
Thecc.07G137700 Theobroma cacao HOM05D005685 ORTHO05D007046 1.1e-65 255.0 499 34.7
FAN25G1369 Fragaria x ananassa HOM05D005685 ORTHO05D007046 2.4e-65 253.8 329 42.9
HPP92_014870 Vanilla planifolia HOM05D005685 ORTHO05D007046 3.2e-65 253.4 466 35.2
CARHR017570 Cardamine hirsuta HOM05D005685 ORTHO05D007046 9.2e-65 251.9 294 46.3
Cfa019501 Carpinus fangiana HOM05D005685 ORTHO05D007046 2.1e-64 250.8 415 38.8
Gohir.D11G302400 Gossypium hirsutum HOM05D005685 ORTHO05D007046 4.6e-64 249.6 328 44.2
AL2G38940 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 7.8e-64 248.8 477 35.2
Gorai.007G332400 Gossypium raimondii HOM05D005685 ORTHO05D007046 1.0e-63 248.4 328 44.2
Carub.0002s2539 Capsella rubella HOM05D005685 ORTHO05D007046 6.6e-63 245.7 489 33.3
AL7G51000 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 1.1e-62 245.0 418 39.2
Ca_12745_v3 Cicer arietinum L. HOM05D005685 ORTHO05D007046 1.1e-62 245.0 524 32.4
FAN21G3337 Fragaria x ananassa HOM05D005685 ORTHO05D007046 1.2e-61 241.5 358 39.9
EL10Ac4g08448 Beta vulgaris HOM05D005685 ORTHO05D007046 2.8e-61 240.4 290 44.5
Nitab4.5_0001140g0120 Nicotiana tabacum HOM05D005685 ORTHO05D007046 2.8e-61 240.4 424 37.5
Carub.0001s1676 Capsella rubella HOM05D005685 ORTHO05D007046 3.1e-60 236.9 303 45.5
AT1G78540 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 4.0e-60 236.5 489 33.7
AL1G29220 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 6.8e-60 235.7 406 39.2
PGSC0003DMG400007083 Solanum tuberosum HOM05D005685 ORTHO05D007046 1.5e-59 234.6 625 29.4
ECA234G1223 Erigeron canadensis HOM05D005685 ORTHO05D007046 9.9e-59 231.9 311 41.8
Eucgr.F03222 Eucalyptus grandis HOM05D005685 ORTHO05D007046 1.9e-57 227.6 253 47.8
AUR62013935 Chenopodium quinoa HOM05D005685 ORTHO05D007046 2.7e-56 223.8 558 29.6
AUR62019678 Chenopodium quinoa HOM05D005685 ORTHO05D007046 5.1e-55 219.5 363 39.4
Ah.03g134490 Amaranthus hybridus HOM05D005685 ORTHO05D007046 3.3e-54 216.9 290 41.7
BcaC05g25679 Brassica carinata HOM05D005685 ORTHO05D007046 1.3e-45 188.3 204 48.0
unitig_747.g21593 Utricularia gibba HOM05D005685 ORTHO05D007046 5.8e-43 179.5 157 59.2
MBI19_g17443_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 3.8e-42 176.8 109 78.0
Duzib213G0171 Durio zibethinus HOM05D005685 ORTHO05D007046 1.4e-41 174.9 522 28.4
BcaB02g06680 Brassica carinata HOM05D005685 ORTHO05D007046 2.4e-36 157.5 160 52.5
RhsimUnG0062900 Rhododendron simsii HOM05D005685 ORTHO05D007046 4.9e-34 149.8 173 47.4
SEGI_34067 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 6.2e-29 132.9 128 52.3
Zm00001eb210210 Zea mays HOM05D005685 ORTHO05D007046 4.0e-28 130.2 159 44.0
Nitab4.5_0003618g0060 Nicotiana tabacum HOM05D005685 ORTHO05D007046 1.1e-25 122.1 422 26.8
Pp3c7_2410 Physcomitrium patens HOM05D005685 ORTHO05D007046 9.3e-25 119.0 165 45.5
SMO145G0004 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 1.2e-24 118.6 171 46.8
Mapoly0028s0082 Marchantia polymorpha HOM05D005685 ORTHO05D007046 6.1e-24 116.3 152 46.1
CBR_g19551 Chara braunii HOM05D005685 ORTHO05D007046 1.9e-22 111.3 133 49.6
DCAR_013783 Daucus carota HOM05D005685 ORTHO05D007046 2.5e-22 110.9 417 24.0
CBR_g28498 Chara braunii HOM05D005685 ORTHO05D007046 3.6e-16 90.5 75 61.3
CDE04G0489 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 8.8e-15 85.9 53 67.9
MBI19_g17438_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 1.8e-12 78.2 56 64.3
Os10g0567300 Oryza sativa ssp. japonica HOM05D005685 ORTHO05D007046 4.7e-08 63.5 68 48.5
Eucgr.F03221 Eucalyptus grandis HOM05D005685 ORTHO05D007046 9.7e-06 55.8 65 43.1


User provided reference genes

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