Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2906 Ceratophyllum demersum HOM05D006667 ORTHO05D008387 2.0e-119 433.3 411 100.0
TAR622G0133 Trochodendron aralioides HOM05D006667 ORTHO05D008387 9.6e-77 291.6 396 71.2
Aqoxy3G04313 Aquilegia oxysepala HOM05D006667 ORTHO05D008387 5.8e-74 282.3 395 65.3
Cpa.g.sc60.94 Carica papaya HOM05D006667 ORTHO05D008387 5.8e-74 282.3 400 74.8
Dinv07500 Davidia involucrata HOM05D006667 ORTHO05D008387 5.8e-74 282.3 396 73.2
Prupe.1G349400 Prunus persica HOM05D006667 ORTHO05D008387 2.2e-73 280.4 401 69.3
Sabra05G0073100 Salix brachista HOM05D006667 ORTHO05D008387 3.8e-73 279.6 397 70.0
Actinidia04346 Actinidia chinensis HOM05D006667 ORTHO05D008387 4.9e-73 279.3 397 69.0
CSS0023228 Camellia sinensis var. sinensis HOM05D006667 ORTHO05D008387 1.2e-71 274.6 397 73.0
MBI06_g27487_MAGBIO Magnolia biondii HOM05D006667 ORTHO05D008387 1.2e-71 274.6 398 71.1
Rhsim12G0089400 Rhododendron simsii HOM05D006667 ORTHO05D008387 6.0e-71 272.3 401 67.3
C02p60910 Brassica napus HOM05D006667 ORTHO05D008387 3.0e-70 270.0 397 70.5
BcaC03g18029 Brassica carinata HOM05D006667 ORTHO05D008387 3.9e-70 269.6 397 70.5
Aa31LG11G2790 Aethionema arabicum HOM05D006667 ORTHO05D008387 5.1e-70 269.2 397 73.6
A02p41020 Brassica napus HOM05D006667 ORTHO05D008387 5.1e-70 269.2 397 71.0
Nitab4.5_0005997g0030 Nicotiana tabacum HOM05D006667 ORTHO05D008387 6.6e-70 268.9 405 72.6
PSO017G3027 Papaver somniferum HOM05D006667 ORTHO05D008387 8.7e-70 268.5 395 82.0
Hund24389 Selenicereus undatus HOM05D006667 ORTHO05D008387 1.1e-69 268.1 405 71.6
CARHR190200 Cardamine hirsuta HOM05D006667 ORTHO05D008387 1.5e-69 267.7 397 73.6
PGSC0003DMG400011513 Solanum tuberosum HOM05D006667 ORTHO05D008387 3.3e-69 266.5 407 68.3
THA.LOC104819372 Tarenaya hassleriana HOM05D006667 ORTHO05D008387 5.6e-69 265.8 398 72.6
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 7.3e-69 265.4 397 72.8
FvH4_4g37160 Fragaria vesca HOM05D006667 ORTHO05D008387 7.3e-69 265.4 396 69.2
FAN12G3199 Fragaria x ananassa HOM05D006667 ORTHO05D008387 7.3e-69 265.4 396 69.2
Medtr1g114610 Medicago truncatula HOM05D006667 ORTHO05D008387 9.6e-69 265.0 414 68.1
Thhalv10004329m.g Eutrema salsugineum HOM05D006667 ORTHO05D008387 1.6e-68 264.2 397 72.3
BraA02t09050Z Brassica rapa HOM05D006667 ORTHO05D008387 2.1e-68 263.8 397 70.8
EL10Ac9g22983 Beta vulgaris HOM05D006667 ORTHO05D008387 3.6e-68 263.1 397 71.5
BolC7t44948H Brassica oleracea HOM05D006667 ORTHO05D008387 3.6e-68 263.1 397 75.1
Migut.L00803 Erythranthe guttata HOM05D006667 ORTHO05D008387 3.6e-68 263.1 396 70.2
RcHm_v2.0_Chr4g0446961 Rosa chinensis HOM05D006667 ORTHO05D008387 3.6e-68 263.1 397 69.0
A06p34280 Brassica napus HOM05D006667 ORTHO05D008387 8.1e-68 261.9 397 75.1
Hma1.2p1_0044F.1_g026320 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 8.1e-68 261.9 401 73.3
BraA06t26360Z Brassica rapa HOM05D006667 ORTHO05D008387 1.1e-67 261.5 397 71.3
Ciclev10033734m.g Citrus clementina HOM05D006667 ORTHO05D008387 1.8e-67 260.8 396 68.2
Nitab4.5_0004979g0060 Nicotiana tabacum HOM05D006667 ORTHO05D008387 1.8e-67 260.8 405 70.4
Solyc04g008980.3 Solanum lycopersicum HOM05D006667 ORTHO05D008387 1.8e-67 260.8 407 70.5
Peaxi162Scf00681g00319 Petunia axillaris HOM05D006667 ORTHO05D008387 5.3e-67 259.2 411 66.9
SalBow2G2931 Salvia bowleyana HOM05D006667 ORTHO05D008387 5.3e-67 259.2 394 72.1
Sopen04g004160 Solanum pennellii HOM05D006667 ORTHO05D008387 5.3e-67 259.2 407 70.5
QL03p045401 Quercus lobata HOM05D006667 ORTHO05D008387 6.9e-67 258.8 400 68.5
CsaV3_5G029020 Cucumis sativus L. HOM05D006667 ORTHO05D008387 9.0e-67 258.5 397 68.5
AT5G23340 Arabidopsis thaliana HOM05D006667 ORTHO05D008387 2.0e-66 257.3 397 74.3
ClCG02G014160 Citrullus lanatus HOM05D006667 ORTHO05D008387 2.0e-66 257.3 397 71.5
MELO3C011757.2 Cucumis melo HOM05D006667 ORTHO05D008387 4.4e-66 256.1 397 68.3
Potri.005G088800 Populus trichocarpa HOM05D006667 ORTHO05D008387 5.8e-66 255.8 397 67.0
Sp2g23820 Schrenkiella parvula HOM05D006667 ORTHO05D008387 5.8e-66 255.8 397 72.3
AL6G34600 Arabidopsis lyrata HOM05D006667 ORTHO05D008387 7.6e-66 255.4 397 71.0
Sed0022119 Sechium edule HOM05D006667 ORTHO05D008387 1.3e-65 254.6 396 71.0
Hma1.2p1_0044F.1_g026310 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 1.7e-65 254.2 431 57.3
Psat6g234200 Pisum sativum HOM05D006667 ORTHO05D008387 1.7e-65 254.2 414 64.5
VMungo0720G1985 Vigna mungo HOM05D006667 ORTHO05D008387 1.7e-65 254.2 405 64.7
Sed0011343 Sechium edule HOM05D006667 ORTHO05D008387 1.1e-64 251.5 397 69.8
Lj6A708T61 Lonicera japonica HOM05D006667 ORTHO05D008387 1.9e-64 250.8 396 66.7
Lj6A713T75 Lonicera japonica HOM05D006667 ORTHO05D008387 1.9e-64 250.8 396 66.7
CiPaw.05G172300 Carya illinoinensis HOM05D006667 ORTHO05D008387 5.4e-64 249.2 397 69.0
CAN.G274.16 Capsicum annuum HOM05D006667 ORTHO05D008387 3.5e-63 246.5 402 70.6
Manes.04G162700 Manihot esculenta HOM05D006667 ORTHO05D008387 3.5e-63 246.5 399 69.2
Sabra07G0063900 Salix brachista HOM05D006667 ORTHO05D008387 1.3e-62 244.6 458 52.8
Lj5g0023243 Lotus japonicus HOM05D006667 ORTHO05D008387 2.3e-62 243.8 396 65.9
Thecc.02G154400 Theobroma cacao HOM05D006667 ORTHO05D008387 2.3e-62 243.8 397 69.3
SGA_v2.0_scaffold80G25957 Striga asiatica HOM05D006667 ORTHO05D008387 3.9e-62 243.0 398 72.6
Gorai.008G147100 Gossypium raimondii HOM05D006667 ORTHO05D008387 5.1e-62 242.7 396 68.2
Carub.0006s2112 Capsella rubella HOM05D006667 ORTHO05D008387 6.6e-62 242.3 397 70.8
Gohir.D12G135900 Gossypium hirsutum HOM05D006667 ORTHO05D008387 6.6e-62 242.3 396 68.2
BcaB07g29860 Brassica carinata HOM05D006667 ORTHO05D008387 8.7e-62 241.9 397 71.5
MSTRG.8092 Avicennia marina HOM05D006667 ORTHO05D008387 1.1e-61 241.5 397 70.8
arahy.Tifrunner.gnm1.ann1.IH6UK4 Arachis hypogaea HOM05D006667 ORTHO05D008387 4.8e-60 236.1 401 65.3
PGR142G2507 Punica granatum HOM05D006667 ORTHO05D008387 4.8e-60 236.1 396 69.7
DCAR_002607 Daucus carota HOM05D006667 ORTHO05D008387 1.4e-59 234.6 403 63.5
Lalb_Chr02g0143651 Lupinus albus HOM05D006667 ORTHO05D008387 1.4e-59 234.6 400 64.0
Atru.chr11.1242 Acer truncatum HOM05D006667 ORTHO05D008387 2.4e-59 233.8 394 70.1
Sc10g0006700 Simmondsia chinensis HOM05D006667 ORTHO05D008387 1.2e-58 231.5 396 64.6
Haze_11790 Corylus avellana HOM05D006667 ORTHO05D008387 1.5e-58 231.1 401 71.1
CANSAT78G2402 Cannabis sativa HOM05D006667 ORTHO05D008387 1.7e-57 227.6 399 65.4
arahy.Tifrunner.gnm1.ann1.F8B6JQ Arachis hypogaea HOM05D006667 ORTHO05D008387 4.9e-57 226.1 395 65.1
Glyma.10G286600 Glycine max HOM05D006667 ORTHO05D008387 6.4e-57 225.7 401 64.6
Cfa008778 Carpinus fangiana HOM05D006667 ORTHO05D008387 4.2e-56 223.0 406 59.6
AUR62032948 Chenopodium quinoa HOM05D006667 ORTHO05D008387 5.5e-56 222.6 398 65.3
unitig_749.g13342 Utricularia gibba HOM05D006667 ORTHO05D008387 7.1e-56 222.2 404 61.6
Zm00001eb185570 Zea mays HOM05D006667 ORTHO05D008387 1.6e-55 221.1 395 59.0
Glyma.20G102500 Glycine max HOM05D006667 ORTHO05D008387 4.6e-55 219.5 400 66.0
TPR.G4129 Trifolium pratense HOM05D006667 ORTHO05D008387 1.0e-54 218.4 401 64.6
TWI74G1436 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 1.0e-54 218.4 397 66.2
Ah.03g147880 Amaranthus hybridus HOM05D006667 ORTHO05D008387 1.8e-54 217.6 416 57.0
Nn3g18579 Nelumbo nucifera HOM05D006667 ORTHO05D008387 3.7e-52 209.9 395 76.7
PSO170G5099 Papaver somniferum HOM05D006667 ORTHO05D008387 3.7e-52 209.9 395 76.5
vmacro15997 Vaccinium macrocarpon HOM05D006667 ORTHO05D008387 8.1e-52 208.8 528 48.3
SEGI_01489 Sequoiadendron giganteum HOM05D006667 ORTHO05D008387 3.4e-50 203.4 393 74.0
Lsat_1_v5_gn_3_34481 Lactuca sativa HOM05D006667 ORTHO05D008387 4.9e-49 199.5 398 65.8
Ca_11261_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 1.9e-48 197.6 414 60.6
HanXRQChr17g0541041 Helianthus annuus HOM05D006667 ORTHO05D008387 2.7e-47 193.7 450 56.9
ECA246G5028 Erigeron canadensis HOM05D002605 ORTHO05D002842 1.8e-46 191.0 390 65.9
Oeu027930.1 Olea europaea HOM05D006667 ORTHO05D008387 1.3e-44 184.9 394 67.3
Eucgr.G02589 Eucalyptus grandis HOM05D006667 ORTHO05D008387 3.7e-44 183.3 396 62.1
ATR0618G066 Amborella trichopoda HOM05D006667 ORTHO05D008387 2.9e-41 173.7 395 71.4
COL.COLO4_33111 Corchorus olitorius HOM05D006667 ORTHO05D008387 1.1e-40 171.8 106 76.4
AUR62017733 Chenopodium quinoa HOM05D006667 ORTHO05D008387 2.1e-39 167.5 410 51.0
arahy.Tifrunner.gnm1.ann1.6XP1A8 Arachis hypogaea HOM05D006667 ORTHO05D008387 5.7e-37 159.5 111 69.4
arahy.Tifrunner.gnm1.ann1.RI7T4X Arachis hypogaea HOM05D006667 ORTHO05D008387 5.7e-37 159.5 111 69.4
HanXRQChr06g0171711 Helianthus annuus HOM05D006667 ORTHO05D008387 2.8e-36 157.1 107 71.0
Os02g0636400 Oryza sativa ssp. japonica HOM05D006667 ORTHO05D008387 4.8e-36 156.4 122 57.4
TWI53G1716 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 3.1e-35 153.7 400 60.5
SMO116G0353 Selaginella moellendorffii HOM05D006667 ORTHO05D008387 4.5e-34 149.8 396 68.4
arahy.Tifrunner.gnm1.ann1.ALJ85P Arachis hypogaea HOM05D006667 ORTHO05D008387 7.7e-34 149.1 99 74.7
Gohir.A12G132300 Gossypium hirsutum HOM05D006667 ORTHO05D008387 1.0e-33 148.7 118 58.5
HPP92_025485 Vanilla planifolia HOM05D006667 ORTHO05D008387 1.3e-33 148.3 107 67.3
arahy.Tifrunner.gnm1.ann1.L6WSTP Arachis hypogaea HOM05D006667 ORTHO05D008387 3.0e-30 137.1 95 70.5
Dinv17648 Davidia involucrata HOM05D006667 ORTHO05D008387 5.1e-30 136.3 113 56.6
Phvul.007G014200 Phaseolus vulgaris HOM05D006667 ORTHO05D008387 8.8e-30 135.6 117 53.0
Medtr7g010500 Medicago truncatula HOM05D006667 ORTHO05D008387 4.5e-18 96.7 85 50.6
Ca_11262_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 1.7e-17 94.7 129 38.0
Potri.007G075600 Populus trichocarpa HOM05D006667 ORTHO05D008387 8.5e-17 92.4 391 34.8
ClCG10G022490 Citrullus lanatus HOM05D002125 ORTHO05D002105 2.1e-07 61.2 88 34.1
Nn2g11037 Nelumbo nucifera HOM05D002125 ORTHO05D002105 2.1e-07 61.2 113 32.7
Eucgr.K02937 Eucalyptus grandis HOM05D002125 ORTHO05D002105 2.7e-07 60.8 113 32.7
Pp3c10_8230 Physcomitrium patens HOM05D006667 ORTHO05D008387 4.7e-07 60.1 58 53.4
Haze_04113 Corylus avellana HOM05D002125 ORTHO05D002105 8.0e-07 59.3 105 30.5
PGR004G0027 Punica granatum HOM05D002125 ORTHO05D002105 1.4e-06 58.5 91 35.2
CAN.G955.3 Capsicum annuum HOM05D002125 ORTHO05D002105 1.8e-06 58.2 85 34.1
CBR_g11992 Chara braunii HOM05D002125 ORTHO05D008387 4.0e-06 57.0 70 45.7
ClCG06G005660 Citrullus lanatus HOM05D002762 ORTHO05D004643 4.0e-06 57.0 127 30.7
SGA_v2.0_scaffold85G26673 Striga asiatica HOM05D002125 ORTHO05D002105 5.2e-06 56.6 85 34.1
ClCG02G019190 Citrullus lanatus HOM05D002125 ORTHO05D002105 6.8e-06 56.2 113 32.7
Actinidia29062 Actinidia chinensis HOM05D002125 ORTHO05D002105 8.8e-06 55.8 85 34.1


User provided reference genes

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