Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2892 Ceratophyllum demersum HOM05D007733 ORTHO05D009786 7.9e-55 216.9 108 100.0
CSS0035024 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 3.3e-21 105.1 61 83.6
Peaxi162Scf00696g00026 Petunia axillaris HOM05D007733 ORTHO05D009786 2.2e-20 102.4 53 90.6
CsaV3_4G029620 Cucumis sativus L. HOM05D007733 ORTHO05D009786 1.4e-19 99.8 53 84.9
CAN.G960.60 Capsicum annuum HOM05D007733 ORTHO05D009786 4.1e-19 98.2 53 84.9
Sed0021033 Sechium edule HOM05D007733 ORTHO05D009786 5.3e-19 97.8 56 76.8
CiPaw.09G048000 Carya illinoinensis HOM05D007733 ORTHO05D009786 1.2e-18 96.7 60 75.0
PGSC0003DMG401008361 Solanum tuberosum HOM05D007733 ORTHO05D009786 1.2e-18 96.7 53 83.0
MELO3C019082.2 Cucumis melo HOM05D007733 ORTHO05D009786 1.5e-18 96.3 53 81.1
Oeu063785.1 Olea europaea HOM05D007733 ORTHO05D009786 1.5e-18 96.3 61 77.0
Thecc.01G129600 Theobroma cacao HOM05D007733 ORTHO05D009786 1.5e-18 96.3 59 79.7
Hma1.2p1_0757F.1_g213300 Hydrangea macrophylla HOM05D007733 ORTHO05D009786 3.4e-18 95.1 58 79.3
Solyc10g078420.2 Solanum lycopersicum HOM05D007733 ORTHO05D009786 4.5e-18 94.7 53 81.1
Aqoxy1G00180 Aquilegia oxysepala HOM05D007733 ORTHO05D009786 5.9e-18 94.4 52 84.6
MD00G1018100 Malus domestica HOM05D007733 ORTHO05D009786 5.9e-18 94.4 59 74.6
Atru.chr1.1436 Acer truncatum HOM05D007733 ORTHO05D009786 7.7e-18 94.0 52 80.8
Lalb_Chr06g0173691 Lupinus albus HOM05D007733 ORTHO05D009786 7.7e-18 94.0 53 81.1
Prupe.7G032300 Prunus persica HOM05D007733 ORTHO05D009786 1.0e-17 93.6 59 76.3
Glyma.12G186000 Glycine max HOM05D007733 ORTHO05D009786 1.3e-17 93.2 61 73.8
Cc06_g19360 Coffea canephora HOM05D007733 ORTHO05D009786 1.7e-17 92.8 59 74.6
MD12G1095600 Malus domestica HOM05D007733 ORTHO05D009786 1.7e-17 92.8 59 72.9
Os11g0136701 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 1.7e-17 92.8 51 80.4
Manes.01G136000 Manihot esculenta HOM05D007733 ORTHO05D009786 2.2e-17 92.4 55 80.0
Potri.016G036400 Populus trichocarpa HOM05D007733 ORTHO05D009786 2.9e-17 92.0 55 78.2
SGA_v2.0_scaffold105G30286 Striga asiatica HOM05D007733 ORTHO05D009786 2.9e-17 92.0 52 84.6
SGA_v2.0_scaffold3G01720 Striga asiatica HOM05D007733 ORTHO05D009786 2.9e-17 92.0 52 84.6
Glyma.13G315500 Glycine max HOM05D007733 ORTHO05D009786 5.0e-17 91.3 61 72.1
Gohir.A11G247101 Gossypium hirsutum HOM05D007733 ORTHO05D009786 5.0e-17 91.3 59 74.6
CSS0016184 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 8.5e-17 90.5 61 72.1
CSS0036430 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 8.5e-17 90.5 61 72.1
Psat4g102040 Pisum sativum HOM05D007733 ORTHO05D009786 8.5e-17 90.5 55 78.2
FAN03G1257 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.1e-16 90.1 55 76.4
FAN06G4775 Fragaria x ananassa HOM05D007733 ORTHO05D009786 1.1e-16 90.1 55 76.4
FAN10G3322 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.1e-16 90.1 55 76.4
arahy.Tifrunner.gnm1.ann1.2TE5XM Arachis hypogaea HOM05D007733 ORTHO05D009786 1.4e-16 89.7 59 72.9
Duzib264G0681 Durio zibethinus HOM05D007733 ORTHO05D009786 1.4e-16 89.7 57 77.2
Os12g0133600 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 1.9e-16 89.4 51 76.5
PSO384G4410 Papaver somniferum HOM05D007733 ORTHO05D009786 1.9e-16 89.4 55 74.5
Phvul.005G122800 Phaseolus vulgaris HOM05D007733 ORTHO05D009786 2.5e-16 89.0 53 75.5
BraA02t04971Z Brassica rapa HOM05D007733 ORTHO05D009786 3.2e-16 88.6 66 71.2
BcaC03g13244 Brassica carinata HOM05D007733 ORTHO05D009786 4.2e-16 88.2 78 61.5
TWI74G1577 Tripterygium wilfordii HOM05D007733 ORTHO05D009786 4.2e-16 88.2 60 71.7
Migut.J01653 Erythranthe guttata HOM05D007733 ORTHO05D009786 5.5e-16 87.8 52 76.9
Medtr1g069390 Medicago truncatula HOM05D007733 ORTHO05D009786 5.5e-16 87.8 52 78.8
Potri.006G039100 Populus trichocarpa HOM05D007733 ORTHO05D009786 5.5e-16 87.8 51 78.4
BcaB05g21564 Brassica carinata HOM05D007733 ORTHO05D009786 9.4e-16 87.0 60 68.3
C02p03760 Brassica napus HOM05D007733 ORTHO05D009786 9.4e-16 87.0 66 66.7
BolC2t06337H Brassica oleracea HOM05D007733 ORTHO05D009786 9.4e-16 87.0 66 66.7
Sp6g34080 Schrenkiella parvula HOM05D007733 ORTHO05D009786 9.4e-16 87.0 66 66.7
RcHm_v2.0_Chr1g0328381 Rosa chinensis HOM05D007733 ORTHO05D009786 1.2e-15 86.7 59 71.2
RcHm_v2.0_Chr1g0328411 Rosa chinensis HOM05D007733 ORTHO05D009786 1.6e-15 86.3 50 80.0
RcHm_v2.0_Chr1g0328511 Rosa chinensis HOM05D007733 ORTHO05D009786 1.6e-15 86.3 59 69.5
THA.LOC104819346 Tarenaya hassleriana HOM05D007733 ORTHO05D009786 2.1e-15 85.9 51 74.5
AT5G09225 Arabidopsis thaliana HOM05D007733 ORTHO05D009786 2.7e-15 85.5 63 68.3
Thhalv10015230m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 2.7e-15 85.5 52 75.0
MBI19_g20791_MAGBIO Magnolia biondii HOM05D007733 ORTHO05D009786 2.7e-15 85.5 45 82.2
Aa31LG1G18010 Aethionema arabicum HOM05D007733 ORTHO05D009786 3.6e-15 85.1 52 75.0
AL6G19610 Arabidopsis lyrata HOM05D007733 ORTHO05D009786 4.7e-15 84.7 51 76.5
Carub.0006s0778 Capsella rubella HOM05D007733 ORTHO05D009786 4.7e-15 84.7 52 75.0
CARHR204200 Cardamine hirsuta HOM05D007733 ORTHO05D009786 4.7e-15 84.7 51 76.5
PGR031G3673 Punica granatum HOM05D007733 ORTHO05D009786 6.1e-15 84.3 59 66.1
Nitab4.5_0000812g0080 Nicotiana tabacum HOM05D007733 ORTHO05D009786 1.4e-14 83.2 41 87.8
Peaxi162Scf00848g00014 Petunia axillaris HOM05D007733 ORTHO05D009786 1.4e-14 83.2 41 87.8
Manes.02G094502 Manihot esculenta HOM05D007733 ORTHO05D009786 1.8e-14 82.8 41 87.8
CANSAT64G1685 Cannabis sativa HOM05D007733 ORTHO05D009786 2.3e-14 82.4 58 69.0
Nitab4.5_0004588g0050 Nicotiana tabacum HOM05D007733 ORTHO05D009786 2.3e-14 82.4 42 83.3
GSVIVG01004069001 Vitis vinifera HOM05D007733 ORTHO05D009786 3.9e-14 81.6 53 71.7
Thhalv10005241m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 6.7e-14 80.9 52 71.2
Hund24585 Selenicereus undatus HOM05D007733 ORTHO05D009786 8.8e-14 80.5 42 81.0
COL.COLO4_35702 Corchorus olitorius HOM05D007733 ORTHO05D009786 2.6e-13 79.0 42 81.0
Lsat_1_v5_gn_5_157040 Lactuca sativa HOM05D007733 ORTHO05D009786 2.6e-13 79.0 52 75.0
BraA06t25997Z Brassica rapa HOM05D007733 ORTHO05D009786 4.4e-13 78.2 61 65.6
Peaxi162Scf00696g00024 Petunia axillaris HOM05D007733 ORTHO05D009786 4.4e-13 78.2 39 87.2
Zm00001eb093420 Zea mays HOM05D007733 ORTHO05D009786 4.4e-13 78.2 41 78.0
BcaB02g09770 Brassica carinata HOM05D007733 ORTHO05D009786 5.7e-13 77.8 52 67.3
Gohir.D11G257301 Gossypium hirsutum HOM05D007733 ORTHO05D009786 5.7e-13 77.8 43 76.7
Gorai.007G275700 Gossypium raimondii HOM05D007733 ORTHO05D009786 5.7e-13 77.8 43 76.7
Oeu022972.2 Olea europaea HOM05D007733 ORTHO05D009786 7.4e-13 77.4 41 82.9
Sc19g0008160 Simmondsia chinensis HOM05D007733 ORTHO05D009786 7.4e-13 77.4 73 54.8
vmacro07790 Vaccinium macrocarpon HOM05D007733 ORTHO05D009786 9.7e-13 77.0 49 73.5
FAN01G2779 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.7e-12 76.3 41 80.5
HanXRQChr01g0008231 Helianthus annuus HOM05D007733 ORTHO05D009786 2.2e-12 75.9 48 72.9
A06p30480 Brassica napus HOM05D007733 ORTHO05D009786 4.8e-12 74.7 61 63.9
HPP92_015863 Vanilla planifolia HOM05D007733 ORTHO05D009786 4.8e-12 74.7 42 78.6
HPP92_015865 Vanilla planifolia HOM05D007733 ORTHO05D009786 4.8e-12 74.7 86 50.0
BcaC01g02637 Brassica carinata HOM05D007733 ORTHO05D009786 6.3e-12 74.3 60 63.3
arahy.Tifrunner.gnm1.ann1.05QC9F Arachis hypogaea HOM05D007733 ORTHO05D009786 1.8e-11 72.8 55 61.8
SalBow7G0067 Salvia bowleyana HOM05D007733 ORTHO05D009786 5.3e-11 71.2 45 73.3
DCAR_027120 Daucus carota HOM05D000958 ORTHO05D000786 1.0e-09 67.0 34 85.3
Mapoly0009s0018 Marchantia polymorpha HOM05D007733 ORTHO05D009786 3.6e-07 58.5 53 54.7
RcHm_v2.0_Chr1g0328311 Rosa chinensis HOM05D007733 ORTHO05D009786 1.4e-06 56.6 34 73.5


User provided reference genes

Program Settings