Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 9.3e-170 600.1 303 100.0
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 1.1e-154 550.1 294 97.3
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 7.6e-63 245.0 218 62.4
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 8.4e-62 241.5 246 56.9
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 7.8e-60 235.0 210 62.4
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 7.8e-60 235.0 210 62.4
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 2.3e-59 233.4 243 56.0
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 3.0e-59 233.0 229 58.1
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 1.1e-58 231.1 215 61.9
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 1.9e-58 230.3 209 61.7
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 3.3e-58 229.6 199 65.8
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 2.1e-57 226.9 201 61.7
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 3.6e-57 226.1 243 56.0
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 4.0e-56 222.6 202 66.3
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 9.0e-56 221.5 211 64.5
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 2.0e-55 220.3 199 62.3
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 7.6e-55 218.4 220 60.0
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 1.7e-54 217.2 230 55.7
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 1.7e-54 217.2 214 60.3
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 8.4e-54 214.9 206 59.2
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 8.4e-54 214.9 221 58.8
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 1.4e-53 214.2 199 60.8
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 4.2e-53 212.6 209 56.9
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 7.1e-53 211.8 231 56.7
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 7.1e-53 211.8 226 54.4
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 2.1e-52 210.3 226 54.0
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 2.7e-52 209.9 243 53.5
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 3.5e-52 209.5 207 59.9
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 4.6e-52 209.1 220 57.3
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 7.8e-52 208.4 212 58.5
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 1.3e-51 207.6 206 59.2
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 1.7e-51 207.2 204 57.4
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 3.9e-51 206.1 209 59.8
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 3.9e-51 206.1 199 59.8
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 6.6e-51 205.3 227 54.6
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.1e-50 204.5 232 53.0
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 1.9e-50 203.8 227 54.2
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 1.9e-50 203.8 203 61.1
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 3.3e-50 203.0 234 51.3
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 3.3e-50 203.0 199 58.8
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 4.3e-50 202.6 197 57.9
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 4.3e-50 202.6 212 56.6
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 5.6e-50 202.2 232 53.4
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 5.6e-50 202.2 199 58.8
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 5.6e-50 202.2 220 56.4
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 7.3e-50 201.8 221 54.8
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 1.3e-49 201.1 198 59.6
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 1.6e-49 200.7 232 53.0
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 2.8e-49 199.9 218 56.4
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 6.2e-49 198.7 253 51.8
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.1e-48 198.0 231 52.4
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 1.1e-48 198.0 224 56.2
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 1.1e-48 198.0 242 52.5
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 1.8e-48 197.2 242 52.5
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 3.1e-48 196.4 229 52.8
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 3.1e-48 196.4 230 53.0
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 1.2e-47 194.5 256 48.8
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 1.2e-47 194.5 208 56.7
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.5e-47 194.1 233 51.1
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 2.0e-47 193.7 200 58.0
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 3.4e-47 193.0 228 52.2
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 3.4e-47 193.0 245 51.0
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 4.5e-47 192.6 231 51.9
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 4.5e-47 192.6 194 57.7
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 4.5e-47 192.6 226 52.2
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 4.5e-47 192.6 210 55.7
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 9.9e-47 191.4 216 51.9
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 6.4e-46 188.7 210 54.3
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 1.2e-44 184.5 212 54.7
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 6.0e-44 182.2 205 56.6
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 8.7e-43 178.3 211 51.2
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 1.1e-42 177.9 206 53.9
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 1.1e-42 177.9 204 55.4
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 2.5e-42 176.8 216 49.5
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 5.6e-42 175.6 188 57.4
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 7.4e-42 175.3 197 52.3
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 9.6e-42 174.9 241 48.1
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 2.1e-41 173.7 226 49.6
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 4.8e-41 172.6 215 50.7
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 1.1e-40 171.4 197 54.8
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 4.0e-40 169.5 197 54.8
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 2.6e-39 166.8 249 46.6
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 3.4e-39 166.4 212 51.4
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 9.9e-39 164.9 213 50.2
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 9.9e-39 164.9 213 50.2
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 6.4e-38 162.2 213 49.3
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 1.9e-37 160.6 209 47.4
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 3.2e-37 159.8 170 55.9
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 6.0e-36 155.6 237 46.0
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 1.0e-35 154.8 211 50.2
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 1.9e-34 150.6 248 42.3
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 6.2e-33 145.6 193 49.2
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 6.2e-33 145.6 207 48.3
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 4.0e-32 142.9 149 57.0
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 6.9e-32 142.1 214 48.1
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 7.6e-31 138.7 206 48.5
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 1.0e-30 138.3 208 44.7
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 1.0e-30 138.3 209 46.4
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 8.4e-30 135.2 210 44.8
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 3.2e-29 133.3 204 44.6
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 4.2e-29 132.9 204 44.6
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 5.5e-29 132.5 177 49.2
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 5.5e-29 132.5 177 49.2
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 7.1e-29 132.1 238 40.3
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 7.1e-29 132.1 238 40.3
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 7.1e-29 132.1 296 36.5
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 2.1e-28 130.6 176 49.4
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 2.7e-28 130.2 177 48.6
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 2.7e-28 130.2 96 72.9
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 7.9e-28 128.6 214 44.4
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 1.3e-25 121.3 165 46.7
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 1.3e-25 121.3 136 55.1
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 3.4e-23 113.2 139 46.0
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 3.4e-23 113.2 177 45.2
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 1.1e-21 108.2 74 79.7
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 5.5e-21 105.9 132 50.0
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 3.0e-19 100.1 80 68.8
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 6.7e-19 99.0 58 86.2
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 8.8e-19 98.6 113 50.4
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 1.1e-18 98.2 58 86.2
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 1.8e-16 90.9 197 36.5
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 5.3e-16 89.4 197 35.5
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 1.0e-14 85.1 48 93.8
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 2.5e-13 80.5 58 70.7
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 4.2e-13 79.7 204 32.8
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 1.2e-12 78.2 72 55.6
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 4.7e-12 76.3 134 44.0
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 1.4e-11 74.7 173 33.5
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 1.1e-08 65.1 39 82.1
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 1.0e-06 58.5 58 55.2
SHI19145 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-06 56.6 111 37.8


User provided reference genes

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