Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 4.4e-65 251.1 126 100.0
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 1.8e-18 96.3 121 46.3
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 4.0e-18 95.1 105 51.4
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 2.0e-17 92.8 93 50.5
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 2.2e-16 89.4 96 49.0
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 1.4e-15 86.7 95 51.6
CDE02G2387 Ceratophyllum demersum HOM05D000054 ORTHO05D005077 5.4e-15 84.7 44 97.7
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 7.9e-14 80.9 78 57.7
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 1.7e-13 79.7 81 51.9
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 2.3e-13 79.3 77 54.5
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 5.1e-13 78.2 102 47.1
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 6.6e-13 77.8 84 51.2
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 6.6e-13 77.8 95 47.4
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 6.6e-13 77.8 111 40.5
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 8.7e-13 77.4 103 46.6
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 8.7e-13 77.4 110 41.8
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 1.1e-12 77.0 84 50.0
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 1.1e-12 77.0 76 50.0
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 1.5e-12 76.6 112 42.9
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 1.5e-12 76.6 114 40.4
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.9e-12 76.3 86 46.5
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 3.3e-12 75.5 86 47.7
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 4.3e-12 75.1 86 46.5
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 4.3e-12 75.1 96 44.8
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 7.4e-12 74.3 86 45.3
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 7.4e-12 74.3 69 55.1
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 7.4e-12 74.3 102 38.2
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 9.6e-12 73.9 90 44.4
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 9.6e-12 73.9 61 62.3
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 1.6e-11 73.2 85 44.7
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 2.8e-11 72.4 63 58.7
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 2.8e-11 72.4 60 55.0
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 3.6e-11 72.0 79 49.4
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 4.8e-11 71.6 82 48.8
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 4.8e-11 71.6 102 42.2
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 6.2e-11 71.2 96 43.8
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 8.1e-11 70.9 80 48.8
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 8.1e-11 70.9 65 58.5
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 8.1e-11 70.9 81 48.1
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 8.1e-11 70.9 51 60.8
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 8.1e-11 70.9 109 37.6
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 8.1e-11 70.9 66 51.5
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 8.1e-11 70.9 94 46.8
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.1e-10 70.5 86 45.3
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 1.1e-10 70.5 102 36.3
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 1.4e-10 70.1 61 60.7
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 1.4e-10 70.1 94 43.6
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 2.4e-10 69.3 62 61.3
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 2.4e-10 69.3 80 45.0
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 2.4e-10 69.3 51 60.8
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 3.1e-10 68.9 82 47.6
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 4.0e-10 68.6 95 43.2
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 4.0e-10 68.6 79 51.9
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 4.0e-10 68.6 77 46.8
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 4.0e-10 68.6 84 46.4
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 4.0e-10 68.6 82 43.9
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 4.0e-10 68.6 53 54.7
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 5.3e-10 68.2 39 79.5
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 5.3e-10 68.2 70 48.6
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 5.3e-10 68.2 106 41.5
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 6.9e-10 67.8 74 48.6
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 6.9e-10 67.8 66 53.0
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 6.9e-10 67.8 102 36.3
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 1.2e-09 67.0 73 45.2
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 1.5e-09 66.6 73 47.9
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.5e-09 66.6 90 41.1
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.5e-09 66.6 90 41.1
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 1.5e-09 66.6 90 41.1
CDE02G2618 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 2.0e-09 66.2 51 70.6
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 2.0e-09 66.2 64 50.0
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 2.0e-09 66.2 51 62.7
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 2.6e-09 65.9 59 59.3
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 3.4e-09 65.5 108 39.8
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 3.4e-09 65.5 81 48.1
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 3.4e-09 65.5 54 53.7
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 4.5e-09 65.1 53 58.5
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 4.5e-09 65.1 71 47.9
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 5.8e-09 64.7 51 60.8
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 5.8e-09 64.7 60 60.0
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 5.8e-09 64.7 60 60.0
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 7.6e-09 64.3 51 60.8
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 7.6e-09 64.3 51 64.7
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 9.9e-09 63.9 85 42.4
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 1.3e-08 63.5 67 47.8
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 1.3e-08 63.5 51 56.9
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 1.7e-08 63.2 59 55.9
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 1.7e-08 63.2 59 55.9
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 1.7e-08 63.2 59 55.9
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 1.7e-08 63.2 59 55.9
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 1.7e-08 63.2 59 55.9
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 2.2e-08 62.8 58 48.3
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 2.2e-08 62.8 81 35.8
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 1.1e-07 60.5 50 56.0
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 1.9e-07 59.7 37 70.3
SEGI_25216 Sequoiadendron giganteum HOM05D006977 ORTHO05D008738 2.4e-07 59.3 67 49.3
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 3.2e-07 58.9 51 54.9
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 7.1e-07 57.8 69 43.5
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 1.2e-06 57.0 71 42.3
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 2.1e-06 56.2 65 46.2
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 6.0e-06 54.7 27 96.3
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 6.0e-06 54.7 53 47.2


User provided reference genes

Program Settings