Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2721 Ceratophyllum demersum HOM05D005610 ORTHO05D006181 3.0e-69 265.0 130 100.0
TAR624G0514 Trochodendron aralioides HOM05D005610 ORTHO05D006181 4.0e-53 211.5 130 76.2
PSO210G2880 Papaver somniferum HOM05D005610 ORTHO05D006181 9.8e-52 206.8 130 73.1
PSO302G0046 Papaver somniferum HOM05D005610 ORTHO05D006181 1.3e-51 206.5 130 73.8
Aqoxy4G02780 Aquilegia oxysepala HOM05D005610 ORTHO05D006181 3.1e-50 201.8 111 84.7
Gohir.A06G152700 Gossypium hirsutum HOM05D005610 ORTHO05D006181 7.3e-47 190.7 116 75.9
Duzib235G0930 Durio zibethinus HOM05D005610 ORTHO05D006181 9.5e-47 190.3 116 75.0
Atru.chr1.2482 Acer truncatum HOM05D005610 ORTHO05D006181 1.2e-46 189.9 114 75.4
Haze_06904 Corylus avellana HOM05D005610 ORTHO05D006181 2.1e-46 189.1 121 71.1
Thecc.06G231600 Theobroma cacao HOM05D005610 ORTHO05D006181 2.1e-46 189.1 113 76.1
Actinidia26870 Actinidia chinensis HOM05D005610 ORTHO05D006181 2.8e-46 188.7 114 75.4
Thecc.10G134700 Theobroma cacao HOM05D005610 ORTHO05D006181 4.7e-46 188.0 113 75.2
Peaxi162Scf00442g00523 Petunia axillaris HOM05D005610 ORTHO05D006181 6.1e-46 187.6 112 76.8
Gorai.010G185800 Gossypium raimondii HOM05D005610 ORTHO05D006181 8.0e-46 187.2 116 74.1
Nitab4.5_0008006g0060 Nicotiana tabacum HOM05D005610 ORTHO05D006181 8.0e-46 187.2 114 75.4
QL10p003579 Quercus lobata HOM05D005610 ORTHO05D006181 8.0e-46 187.2 115 73.0
Cpa.g.sc152.66 Carica papaya HOM05D005610 ORTHO05D006181 1.0e-45 186.8 116 72.4
COL.COLO4_31865 Corchorus olitorius HOM05D005610 ORTHO05D006181 1.0e-45 186.8 113 75.2
Nn8g38603 Nelumbo nucifera HOM05D005610 ORTHO05D006181 1.4e-45 186.4 123 72.4
Thecc.10G135500 Theobroma cacao HOM05D005610 ORTHO05D006181 1.4e-45 186.4 113 74.3
Nitab4.5_0001701g0220 Nicotiana tabacum HOM05D005610 ORTHO05D006181 1.8e-45 186.0 112 75.9
Nitab4.5_0018980g0020 Nicotiana tabacum HOM05D005610 ORTHO05D006181 2.3e-45 185.7 112 75.9
TWI38G1154 Tripterygium wilfordii HOM05D005610 ORTHO05D006181 2.3e-45 185.7 112 76.8
CAN.G1263.12 Capsicum annuum HOM05D005610 ORTHO05D006181 3.1e-45 185.3 112 75.9
Duzib160G0112 Durio zibethinus HOM05D005610 ORTHO05D006181 3.1e-45 185.3 116 73.3
Ciclev10017234m.g Citrus clementina HOM05D005610 ORTHO05D006181 4.0e-45 184.9 114 73.7
Nitab4.5_0001867g0090 Nicotiana tabacum HOM05D005610 ORTHO05D006181 5.2e-45 184.5 114 74.6
Prupe.8G115200 Prunus persica HOM05D005610 ORTHO05D006181 5.2e-45 184.5 119 70.6
Solyc04g014700.4 Solanum lycopersicum HOM05D005610 ORTHO05D006181 5.2e-45 184.5 112 75.0
Aa31LG5G10530 Aethionema arabicum HOM05D005610 ORTHO05D006181 6.8e-45 184.1 111 73.9
CANSAT01G2220 Cannabis sativa HOM05D005610 ORTHO05D006181 6.8e-45 184.1 114 72.8
Prupe.8G114900 Prunus persica HOM05D005610 ORTHO05D006181 6.8e-45 184.1 119 70.6
Sopen04g006810 Solanum pennellii HOM05D005610 ORTHO05D006181 6.8e-45 184.1 112 75.0
Dinv13959 Davidia involucrata HOM05D005610 ORTHO05D006181 8.9e-45 183.7 112 75.0
Eucgr.B02596 Eucalyptus grandis HOM05D005610 ORTHO05D006181 1.2e-44 183.3 113 75.2
MD10G1088300 Malus domestica HOM05D005610 ORTHO05D006181 1.2e-44 183.3 116 71.6
PGSC0003DMG400023560 Solanum tuberosum HOM05D005610 ORTHO05D006181 1.2e-44 183.3 112 75.0
BNapus_Darmor_BZH_scaffold_133p00040 Brassica napus HOM05D005610 ORTHO05D006181 2.6e-44 182.2 111 73.0
BraA01t04664Z Brassica rapa HOM05D005610 ORTHO05D006181 2.6e-44 182.2 111 73.0
CiPaw.10G076800 Carya illinoinensis HOM05D005610 ORTHO05D006181 3.4e-44 181.8 116 70.7
SalBow8G2682 Salvia bowleyana HOM05D005610 ORTHO05D006181 4.4e-44 181.4 111 73.9
Cc00_g15270 Coffea canephora HOM05D005610 ORTHO05D006181 5.8e-44 181.0 116 72.4
vmacro03652 Vaccinium macrocarpon HOM05D005610 ORTHO05D006181 7.5e-44 180.6 110 76.4
EL10Ac4g08756 Beta vulgaris HOM05D005610 ORTHO05D006181 9.8e-44 180.3 108 78.7
Migut.H01600 Erythranthe guttata HOM05D005610 ORTHO05D006181 1.3e-43 179.9 111 73.9
PGR142G4331 Punica granatum HOM05D005610 ORTHO05D006181 1.3e-43 179.9 112 74.1
BcaC09g47662 Brassica carinata HOM05D005610 ORTHO05D006181 2.9e-43 178.7 111 71.2
Cc09_g00980 Coffea canephora HOM05D005610 ORTHO05D006181 2.9e-43 178.7 114 72.8
Thhalv10022365m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 2.9e-43 178.7 111 71.2
GSVIVG01008189001 Vitis vinifera HOM05D005610 ORTHO05D006181 4.9e-43 177.9 116 72.4
Carub.0003s0067 Capsella rubella HOM05D005610 ORTHO05D006181 6.4e-43 177.6 111 72.1
ClCG07G002910 Citrullus lanatus HOM05D005610 ORTHO05D006181 6.4e-43 177.6 121 68.6
CARHR075530 Cardamine hirsuta HOM05D005610 ORTHO05D006181 8.3e-43 177.2 111 72.1
AUR62014294 Chenopodium quinoa HOM05D005610 ORTHO05D006181 8.3e-43 177.2 111 73.0
ECA238G1057 Erigeron canadensis HOM05D005610 ORTHO05D006181 8.3e-43 177.2 112 71.4
ClCG01G011300 Citrullus lanatus HOM05D005610 ORTHO05D006181 1.1e-42 176.8 111 72.1
FvH4_2g07070 Fragaria vesca HOM05D005610 ORTHO05D006181 1.1e-42 176.8 117 69.2
Sp3g00630 Schrenkiella parvula HOM05D005610 ORTHO05D006181 1.1e-42 176.8 111 70.3
MELO3C008876.2 Cucumis melo HOM05D005610 ORTHO05D006181 1.4e-42 176.4 111 73.0
FAN15G0825 Fragaria x ananassa HOM05D005610 ORTHO05D006181 1.4e-42 176.4 112 71.4
AT3G01435 Arabidopsis thaliana HOM05D005610 ORTHO05D006181 1.9e-42 176.0 111 71.2
AUR62034142 Chenopodium quinoa HOM05D005610 ORTHO05D006181 1.9e-42 176.0 108 75.0
RcHm_v2.0_Chr6g0259461 Rosa chinensis HOM05D005610 ORTHO05D006181 2.4e-42 175.6 124 65.3
Sed0027170 Sechium edule HOM05D005610 ORTHO05D006181 2.4e-42 175.6 109 72.5
AL3G10740 Arabidopsis lyrata HOM05D005610 ORTHO05D006181 3.2e-42 175.3 111 71.2
SGA_v2.0_scaffold7G03768 Striga asiatica HOM05D005610 ORTHO05D006181 3.2e-42 175.3 111 71.2
CsaV3_4G031690 Cucumis sativus L. HOM05D005610 ORTHO05D006181 7.0e-42 174.1 111 71.2
Lj5g0020791 Lotus japonicus HOM05D005610 ORTHO05D006181 7.0e-42 174.1 119 68.9
Hund25163 Selenicereus undatus HOM05D005610 ORTHO05D006181 7.0e-42 174.1 116 69.8
ATR1153G018 Amborella trichopoda HOM05D005610 ORTHO05D006181 9.2e-42 173.7 106 74.5
Glyma.19G169600 Glycine max HOM05D005610 ORTHO05D006181 2.0e-41 172.6 116 69.8
HanXRQChr05g0129341 Helianthus annuus HOM05D005610 ORTHO05D006181 2.0e-41 172.6 115 68.7
Phvul.004G117800 Phaseolus vulgaris HOM05D005610 ORTHO05D006181 2.0e-41 172.6 116 69.8
Oeu054255.1 Olea europaea HOM05D005610 ORTHO05D006181 2.7e-41 172.2 111 72.1
SGA_v2.0_scaffold4G01884 Striga asiatica HOM05D005610 ORTHO05D006181 3.5e-41 171.8 116 67.2
A05p44570 Brassica napus HOM05D005610 ORTHO05D006181 4.6e-41 171.4 111 68.5
BraA05t23199Z Brassica rapa HOM05D005610 ORTHO05D006181 4.6e-41 171.4 111 68.5
arahy.Tifrunner.gnm1.ann1.PD4MQY Arachis hypogaea HOM05D005610 ORTHO05D006181 6.0e-41 171.0 119 68.1
Ca_13393_v3 Cicer arietinum L. HOM05D005610 ORTHO05D006181 6.0e-41 171.0 112 70.5
Lj4g0017663 Lotus japonicus HOM05D005610 ORTHO05D006181 6.0e-41 171.0 116 69.0
THA.LOC104822382 Tarenaya hassleriana HOM05D005610 ORTHO05D006181 6.0e-41 171.0 114 69.3
CSS0047184 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 7.8e-41 170.6 111 69.4
arahy.Tifrunner.gnm1.ann1.IYUI89 Arachis hypogaea HOM05D003989 ORTHO05D004626 1.3e-40 169.9 115 69.6
Glyma.03G168300 Glycine max HOM05D005610 ORTHO05D006181 2.3e-40 169.1 112 69.6
Lj6g0026774 Lotus japonicus HOM05D005610 ORTHO05D006181 2.3e-40 169.1 112 69.6
Medtr1g023330 Medicago truncatula HOM05D005610 ORTHO05D006181 2.3e-40 169.1 112 69.6
BolC5t35148H Brassica oleracea HOM05D005610 ORTHO05D006181 3.9e-40 168.3 111 67.6
ATR0723G088 Amborella trichopoda HOM05D005610 ORTHO05D006181 6.6e-40 167.5 106 72.6
Thhalv10022907m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 6.6e-40 167.5 126 61.9
HPP92_003728 Vanilla planifolia HOM05D005610 ORTHO05D006181 1.1e-39 166.8 108 72.2
Medtr8g106470 Medicago truncatula HOM05D005610 ORTHO05D006181 1.5e-39 166.4 112 69.6
MSTRG.13119 Avicennia marina HOM05D005610 ORTHO05D006181 4.3e-39 164.9 111 67.6
C09p75160 Brassica napus HOM05D005610 ORTHO05D006181 4.3e-39 164.9 111 66.7
BolC1t05956H Brassica oleracea HOM05D005610 ORTHO05D006181 4.3e-39 164.9 132 59.1
Oeu052223.1 Olea europaea HOM05D005610 ORTHO05D006181 1.6e-38 162.9 112 67.9
Manes.16G001300 Manihot esculenta HOM05D005610 ORTHO05D006181 2.8e-38 162.2 114 64.9
Lalb_Chr04g0257231 Lupinus albus HOM05D005610 ORTHO05D006181 1.1e-37 160.2 112 67.0
Sabra04G0000600 Salix brachista HOM05D005610 ORTHO05D006181 1.1e-37 160.2 108 68.5
Potri.004G001600 Populus trichocarpa HOM05D005610 ORTHO05D006181 2.3e-37 159.1 108 68.5
TAR626G0207 Trochodendron aralioides HOM05D005610 ORTHO05D006181 2.3e-37 159.1 193 45.6
MBI19_g29445_MAGBIO Magnolia biondii HOM05D005610 ORTHO05D006181 3.1e-37 158.7 134 59.7
VMungo0464G1641 Vigna mungo HOM05D005610 ORTHO05D006181 3.1e-37 158.7 140 57.9
SEGI_23772 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 4.0e-37 158.3 126 62.7
Zm00001eb234830 Zea mays HOM05D005610 ORTHO05D006181 5.2e-37 157.9 109 65.1
Ah.06g187910 Amaranthus hybridus HOM05D005610 ORTHO05D006181 7.5e-36 154.1 99 70.7
unitig_748.g7924 Utricularia gibba HOM05D000772 ORTHO05D006181 7.5e-36 154.1 109 63.3
Lsat_1_v5_gn_7_13401 Lactuca sativa HOM05D005610 ORTHO05D006181 4.1e-34 148.3 99 65.7
Os02g0189100 Oryza sativa ssp. japonica HOM05D005610 ORTHO05D006181 2.7e-33 145.6 106 59.4
Zm00001eb206370 Zea mays HOM05D005610 ORTHO05D006181 2.7e-33 145.6 103 65.0
Gohir.D06G159100 Gossypium hirsutum HOM05D005610 ORTHO05D006181 1.0e-32 143.7 86 73.3
Mapoly0014s0199 Marchantia polymorpha HOM05D005610 ORTHO05D006181 3.6e-30 135.2 107 57.9
Pp3c10_18150 Physcomitrium patens HOM05D005610 ORTHO05D006181 1.1e-29 133.7 105 56.2
Psat6g005240 Pisum sativum HOM05D005610 ORTHO05D006181 8.9e-29 130.6 100 66.0
FAN24G2055 Fragaria x ananassa HOM05D005610 ORTHO05D006181 2.0e-28 129.4 82 68.3
Dinv29757 Davidia involucrata HOM05D005610 ORTHO05D006181 1.7e-27 126.3 94 68.1
CSS0025052 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 4.9e-27 124.8 81 65.4
HanXRQChr15g0470051 Helianthus annuus HOM05D005610 ORTHO05D006181 4.1e-26 121.7 89 64.0
BNapus_Darmor_BZH_scaffold_119p00050 Brassica napus HOM05D005610 ORTHO05D006181 6.0e-25 117.9 75 73.3
BNapus_Darmor_BZH_scaffold_97p00380 Brassica napus HOM05D005610 ORTHO05D006181 6.0e-25 117.9 75 73.3
SMO200G0153 Selaginella moellendorffii HOM05D005610 ORTHO05D006181 6.0e-25 117.9 111 46.8
Actinidia02323 Actinidia chinensis HOM05D005610 ORTHO05D006181 3.0e-24 115.5 81 66.7
Zm00001eb004040 Zea mays HOM05D005610 ORTHO05D006181 3.0e-24 115.5 72 66.7
Thecc.10G135300 Theobroma cacao HOM05D005610 ORTHO05D006181 5.1e-24 114.8 70 78.6
AagrBONN_evm.TU.Sc2ySwM_228.3334 Anthoceros agrestis HOM05D005610 ORTHO05D006181 6.2e-22 107.8 131 42.0
Pp3c3_34050 Physcomitrium patens HOM05D005610 ORTHO05D006181 1.4e-21 106.7 78 62.8
FAN27G3428 Fragaria x ananassa HOM05D005610 ORTHO05D006181 8.9e-21 104.0 76 60.5
Eucgr.K02585 Eucalyptus grandis HOM05D005610 ORTHO05D006181 1.2e-20 103.6 70 72.9
CBR_g27782 Chara braunii HOM05D005610 ORTHO05D001468 2.0e-20 102.8 111 45.9
Rhsim13G0147700 Rhododendron simsii HOM05D005610 ORTHO05D006181 7.1e-18 94.4 61 72.1
FAN20G1916 Fragaria x ananassa HOM05D005610 ORTHO05D006181 2.7e-17 92.4 59 64.4
TPR.G7342 Trifolium pratense HOM05D005610 ORTHO05D006181 1.7e-16 89.7 57 66.7
Sc16g0007910 Simmondsia chinensis HOM05D005610 ORTHO05D006181 3.6e-14 82.0 54 72.2
RcHm_v2.0_Chr7g0240711 Rosa chinensis HOM05D005610 ORTHO05D006181 6.9e-13 77.8 59 55.9
RcHm_v2.0_Chr7g0240721 Rosa chinensis HOM05D005610 ORTHO05D006181 1.3e-11 73.6 50 70.0
SEGI_27415 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 2.2e-11 72.8 60 55.0


User provided reference genes

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