Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2720 Ceratophyllum demersum HOM05D004568 ORTHO05D005343 1.6e-144 516.2 270 100.0
Sc04g0007050 Simmondsia chinensis HOM05D004568 ORTHO05D005343 5.2e-15 85.9 302 31.1
Lj2g0022626 Lotus japonicus HOM05D004568 ORTHO05D005343 8.9e-15 85.1 73 54.8
DCAR_030135 Daucus carota HOM05D004568 ORTHO05D005343 1.2e-14 84.7 156 35.9
Atru.chr11.1442 Acer truncatum HOM05D004568 ORTHO05D005343 2.0e-14 84.0 121 41.3
Atru.chr11.1472 Acer truncatum HOM05D004568 ORTHO05D005343 2.0e-14 84.0 121 41.3
MD16G1057700 Malus domestica HOM05D004568 ORTHO05D005343 2.0e-14 84.0 117 42.7
Nn3g17622 Nelumbo nucifera HOM05D004568 ORTHO05D005343 2.0e-14 84.0 311 29.3
MD13G1052200 Malus domestica HOM05D004568 ORTHO05D005343 7.6e-14 82.0 117 47.9
Thecc.02G315200 Theobroma cacao HOM05D004568 ORTHO05D005343 7.6e-14 82.0 118 39.0
GSVIVG01012027001 Vitis vinifera HOM05D004568 ORTHO05D005343 7.6e-14 82.0 122 42.6
Gohir.D13G217400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 9.9e-14 81.6 149 41.6
Gorai.013G247900 Gossypium raimondii HOM05D004568 ORTHO05D005343 9.9e-14 81.6 149 41.6
CANSAT64G0418 Cannabis sativa HOM05D004568 ORTHO05D005343 1.7e-13 80.9 127 42.5
Haze_11819 Corylus avellana HOM05D004568 ORTHO05D005343 1.7e-13 80.9 74 54.1
Cfa008803 Carpinus fangiana HOM05D004568 ORTHO05D005343 2.2e-13 80.5 137 38.0
QL03p044380 Quercus lobata HOM05D004568 ORTHO05D005343 2.2e-13 80.5 135 38.5
Dinv16554 Davidia involucrata HOM05D004568 ORTHO05D005343 3.7e-13 79.7 320 31.6
Peaxi162Scf00208g00131 Petunia axillaris HOM05D004568 ORTHO05D005343 3.7e-13 79.7 131 38.2
arahy.Tifrunner.gnm1.ann1.35X7C5 Arachis hypogaea HOM05D004568 ORTHO05D005343 4.9e-13 79.3 72 52.8
arahy.Tifrunner.gnm1.ann1.Y3DNXR Arachis hypogaea HOM05D004568 ORTHO05D005343 4.9e-13 79.3 72 52.8
Sabra08G0083400 Salix brachista HOM05D004568 ORTHO05D005343 6.4e-13 79.0 139 36.7
Oeu033529.1 Olea europaea HOM05D004568 ORTHO05D005343 8.4e-13 78.6 294 27.2
Hma1.2p1_1424F.1_g282720 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 1.1e-12 78.2 146 37.7
Hma1.2p1_1459F.1_g284900 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 1.1e-12 78.2 146 37.7
Cpa.g.sc1.257 Carica papaya HOM05D004568 ORTHO05D005343 1.9e-12 77.4 123 40.7
CiPaw.05G118300 Carya illinoinensis HOM05D004568 ORTHO05D005343 4.1e-12 76.3 136 43.4
Glyma.02G128700 Glycine max HOM05D004568 ORTHO05D005343 1.2e-11 74.7 72 50.0
Nitab4.5_0004681g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 1.2e-11 74.7 131 34.4
SGA_v2.0_scaffold36G14507 Striga asiatica HOM05D004568 ORTHO05D005343 1.2e-11 74.7 113 39.8
DCAR_026699 Daucus carota HOM05D004568 ORTHO05D005343 1.6e-11 74.3 235 33.2
COL.COLO4_34999 Corchorus olitorius HOM05D004568 ORTHO05D005343 2.7e-11 73.6 81 46.9
Nitab4.5_0001554g0060 Nicotiana tabacum HOM05D004568 ORTHO05D005343 2.7e-11 73.6 130 33.8
SEGI_17788 Sequoiadendron giganteum HOM05D004568 ORTHO05D005343 2.7e-11 73.6 77 48.1
TWI75G0122 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 2.7e-11 73.6 124 35.5
TWI79G0507 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 2.7e-11 73.6 71 45.1
Duzib268G1242 Durio zibethinus HOM05D004568 ORTHO05D005343 4.6e-11 72.8 120 45.0
HanXRQChr08g0214641 Helianthus annuus HOM05D004568 ORTHO05D005343 4.6e-11 72.8 205 31.2
HanXRQChr08g0214671 Helianthus annuus HOM05D004568 ORTHO05D005343 4.6e-11 72.8 205 31.2
CDE04G2972 Ceratophyllum demersum HOM05D004568 ORTHO05D005343 6.0e-11 72.4 133 36.8
Potri.008G109600 Populus trichocarpa HOM05D004568 ORTHO05D005343 6.0e-11 72.4 134 47.8
Potri.T062072 Populus trichocarpa HOM05D004568 ORTHO05D005343 6.0e-11 72.4 134 47.8
SalBow8G3235 Salvia bowleyana HOM05D004568 ORTHO05D005343 6.0e-11 72.4 271 28.4
SalBow8G5572 Salvia bowleyana HOM05D004568 ORTHO05D005343 6.0e-11 72.4 271 28.4
CSS0045744 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 1.0e-10 71.6 160 34.4
Sed0022479 Sechium edule HOM05D004568 ORTHO05D005343 1.0e-10 71.6 154 33.1
AUR62019434 Chenopodium quinoa HOM05D000052 ORTHO05D000046 1.7e-10 70.9 157 31.2
TAR374G1393 Trochodendron aralioides HOM05D004568 ORTHO05D005343 1.7e-10 70.9 231 30.3
Thecc.09G210800 Theobroma cacao HOM05D004568 ORTHO05D005343 2.3e-10 70.5 122 43.4
Migut.L01125 Erythranthe guttata HOM05D004568 ORTHO05D005343 3.0e-10 70.1 86 45.3
Glyma.04G152800 Glycine max HOM05D004568 ORTHO05D005343 5.1e-10 69.3 70 48.6
Lalb_Chr10g0099511 Lupinus albus HOM05D004568 ORTHO05D005343 1.1e-09 68.2 76 53.9
EL10Ac6g14584 Beta vulgaris HOM05D004568 ORTHO05D005343 1.5e-09 67.8 162 34.6
HanXRQChr12g0365221 Helianthus annuus HOM05D004568 ORTHO05D005343 1.5e-09 67.8 130 34.6
Solyc04g005920.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 1.5e-09 67.8 249 30.9
PGSC0003DMG400007516 Solanum tuberosum HOM05D004568 ORTHO05D005343 1.5e-09 67.8 221 27.1
Duzib168G1705 Durio zibethinus HOM05D004568 ORTHO05D005343 3.3e-09 66.6 122 42.6
Duzib251G0342 Durio zibethinus HOM05D004568 ORTHO05D005343 3.3e-09 66.6 122 41.8
Prupe.1G299900 Prunus persica HOM05D004568 ORTHO05D005343 3.3e-09 66.6 75 58.7
unitig_747.g21193 Utricularia gibba HOM05D004568 ORTHO05D005343 3.3e-09 66.6 124 38.7
PGSC0003DMG400002843 Solanum tuberosum HOM05D004568 ORTHO05D005343 4.3e-09 66.2 233 30.5
Sopen04g001970 Solanum pennellii HOM05D004568 ORTHO05D005343 5.6e-09 65.9 229 31.4
Gohir.A13G213600 Gossypium hirsutum HOM05D004568 ORTHO05D005343 7.3e-09 65.5 150 38.7
PSO063G5818 Papaver somniferum HOM05D004568 ORTHO05D005343 7.3e-09 65.5 72 63.9
Aqoxy3G03818 Aquilegia oxysepala HOM05D004568 ORTHO05D005343 9.6e-09 65.1 192 34.9
Sabra10G0102200 Salix brachista HOM05D004568 ORTHO05D005343 9.6e-09 65.1 154 39.6
VMungo1215G2036 Vigna mungo HOM05D004568 ORTHO05D005343 9.6e-09 65.1 128 44.5
AUR62039200 Chenopodium quinoa HOM05D004568 ORTHO05D005343 1.2e-08 64.7 184 29.3
PSO782G5402 Papaver somniferum HOM05D004568 ORTHO05D005343 1.2e-08 64.7 72 63.9
CiPaw.06G097400 Carya illinoinensis HOM05D004568 ORTHO05D005343 1.6e-08 64.3 123 44.7
BcaC03g17273 Brassica carinata HOM05D004568 ORTHO05D005343 2.1e-08 63.9 77 39.0
C02p52170 Brassica napus HOM05D004568 ORTHO05D005343 2.1e-08 63.9 77 39.0
BolC2t11302H Brassica oleracea HOM05D004568 ORTHO05D005343 2.1e-08 63.9 77 39.0
CSS0002717 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 2.1e-08 63.9 222 32.0
SGA_v2.0_scaffold16G07859 Striga asiatica HOM05D004568 ORTHO05D005343 2.1e-08 63.9 211 31.8
Solyc05g010450.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 3.6e-08 63.2 235 28.1
Sopen05g006240 Solanum pennellii HOM05D004568 ORTHO05D005343 3.6e-08 63.2 235 28.1
Gohir.D12G160800 Gossypium hirsutum HOM05D004568 ORTHO05D005343 6.2e-08 62.4 140 34.3
Ah.06g195100 Amaranthus hybridus HOM05D004568 ORTHO05D005343 8.1e-08 62.0 71 47.9
HanXRQChr17g0551111 Helianthus annuus HOM05D004568 ORTHO05D005343 8.1e-08 62.0 128 41.4
HanXRQChr17g0551511 Helianthus annuus HOM05D004568 ORTHO05D005343 8.1e-08 62.0 128 41.4
Lsat_1_v5_gn_3_58841 Lactuca sativa HOM05D004568 ORTHO05D005343 8.1e-08 62.0 228 29.8
A09p24900 Brassica napus HOM05D004568 ORTHO05D005343 1.1e-07 61.6 77 39.0
Cc11_g11080 Coffea canephora HOM05D004568 ORTHO05D005343 1.1e-07 61.6 197 33.0
Gorai.008G173800 Gossypium raimondii HOM05D004568 ORTHO05D005343 1.1e-07 61.6 140 33.6
PGR119G0824 Punica granatum HOM05D004568 ORTHO05D005343 1.1e-07 61.6 71 57.7
Actinidia30170 Actinidia chinensis HOM05D004568 ORTHO05D005343 1.8e-07 60.8 80 53.8
ClCG05G023290 Citrullus lanatus HOM05D004568 ORTHO05D005343 1.8e-07 60.8 145 41.4
Ciclev10033580m.g Citrus clementina HOM05D004568 ORTHO05D005343 1.8e-07 60.8 81 49.4
MELO3C012188.2 Cucumis melo HOM05D004568 ORTHO05D005343 1.8e-07 60.8 145 41.4
Ah.04g164810 Amaranthus hybridus HOM05D004568 ORTHO05D005343 2.4e-07 60.5 246 28.0
COL.COLO4_27716 Corchorus olitorius HOM05D004568 ORTHO05D005343 3.1e-07 60.1 176 30.1
ECA246G3306 Erigeron canadensis HOM05D004568 ORTHO05D005343 3.1e-07 60.1 128 40.6
THA.LOC104805234 Tarenaya hassleriana HOM05D004568 ORTHO05D005343 3.1e-07 60.1 71 56.3
TPR.G2653 Trifolium pratense HOM05D004568 ORTHO05D005343 4.0e-07 59.7 71 53.5
BcaC04g21427 Brassica carinata HOM05D004568 ORTHO05D005343 5.2e-07 59.3 77 39.0
BcaC04g21428 Brassica carinata HOM05D004568 ORTHO05D005343 5.2e-07 59.3 77 39.0
TWI31G1373 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 5.2e-07 59.3 154 27.3
TAR622G0675 Trochodendron aralioides HOM05D004568 ORTHO05D005343 5.2e-07 59.3 130 42.3
AUR62007782 Chenopodium quinoa HOM05D004568 ORTHO05D005343 6.8e-07 58.9 121 36.4
CsaV3_5G033720 Cucumis sativus L. HOM05D004568 ORTHO05D005343 6.8e-07 58.9 145 40.0
Gohir.A12G157850 Gossypium hirsutum HOM05D004568 ORTHO05D005343 6.8e-07 58.9 140 32.9
Gohir.A12G157951 Gossypium hirsutum HOM05D004568 ORTHO05D005343 6.8e-07 58.9 140 32.9
Manes.06G076600 Manihot esculenta HOM05D004568 ORTHO05D005343 6.8e-07 58.9 115 35.7
THA.LOC104824044 Tarenaya hassleriana HOM05D004568 ORTHO05D005343 6.8e-07 58.9 71 54.9
Rhsim09G0116100 Rhododendron simsii HOM05D004568 ORTHO05D005343 8.9e-07 58.5 253 30.8
Rhsim09G0116400 Rhododendron simsii HOM05D004568 ORTHO05D005343 8.9e-07 58.5 253 30.8
Potri.010G133600 Populus trichocarpa HOM05D004568 ORTHO05D005343 1.2e-06 58.2 134 45.5
Aa31LG2G6720 Aethionema arabicum HOM05D004568 ORTHO05D005343 2.0e-06 57.4 75 54.7
AT3G25590 Arabidopsis thaliana HOM05D004568 ORTHO05D005343 2.6e-06 57.0 83 38.6
BraA09t38078Z Brassica rapa HOM05D004568 ORTHO05D005343 2.6e-06 57.0 77 39.0
Ah.12g062580 Amaranthus hybridus HOM05D004568 ORTHO05D005343 3.4e-06 56.6 70 45.7
Eucgr.G02393 Eucalyptus grandis HOM05D004568 ORTHO05D005343 3.4e-06 56.6 132 40.2
A06p42720 Brassica napus HOM05D004568 ORTHO05D005343 4.4e-06 56.2 77 39.0
C09p31920 Brassica napus HOM05D004568 ORTHO05D005343 4.4e-06 56.2 77 48.1
BolC9t56047H Brassica oleracea HOM05D004568 ORTHO05D005343 4.4e-06 56.2 77 48.1
BraA06t27185Z Brassica rapa HOM05D004568 ORTHO05D005343 4.4e-06 56.2 77 39.0
Medtr6g472100 Medicago truncatula HOM05D004568 ORTHO05D005343 4.4e-06 56.2 78 50.0
Gohir.A03G108200 Gossypium hirsutum HOM05D004568 ORTHO05D005343 5.8e-06 55.8 142 38.0
Gohir.D02G133400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 5.8e-06 55.8 142 38.7
Gorai.005G149300 Gossypium raimondii HOM05D004568 ORTHO05D005343 5.8e-06 55.8 142 38.7
Manes.14G094400 Manihot esculenta HOM05D004568 ORTHO05D005343 7.6e-06 55.5 111 41.4
FvH4_4g28580 Fragaria vesca HOM05D004568 ORTHO05D005343 9.9e-06 55.1 119 40.3
FAN07G0048 Fragaria x ananassa HOM05D004568 ORTHO05D005343 9.9e-06 55.1 119 40.3
FAN12G0798 Fragaria x ananassa HOM05D004568 ORTHO05D005343 9.9e-06 55.1 119 40.3
FAN22G1274 Fragaria x ananassa HOM05D004568 ORTHO05D005343 9.9e-06 55.1 119 40.3


User provided reference genes

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