Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 2.5e-195 685.3 351 100.0
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 4.0e-92 342.4 330 57.9
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 1.2e-91 340.9 322 58.4
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 1.5e-91 340.5 334 58.1
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 2.6e-91 339.7 301 58.8
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 3.8e-90 335.9 338 58.0
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.1e-89 334.3 332 57.5
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 4.2e-89 332.4 247 66.0
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 2.7e-88 329.7 337 54.3
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 1.3e-87 327.4 323 55.4
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 2.3e-87 326.6 355 52.4
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 2.3e-87 326.6 312 57.1
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 5.1e-87 325.5 244 65.6
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 1.9e-86 323.6 306 56.9
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 2.5e-86 323.2 267 62.9
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 3.3e-86 322.8 263 63.9
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 4.3e-86 322.4 266 62.0
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 9.6e-86 321.2 261 62.1
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 1.3e-85 320.9 264 62.9
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 1.6e-85 320.5 264 62.1
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 2.1e-85 320.1 291 58.4
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 2.1e-85 320.1 284 59.5
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 2.8e-85 319.7 274 62.4
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 4.8e-85 318.9 234 67.5
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 8.1e-85 318.2 354 52.3
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 1.8e-84 317.0 270 61.9
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 1.8e-84 317.0 292 58.2
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 1.8e-84 317.0 284 58.8
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 2.4e-84 316.6 273 61.5
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 2.4e-84 316.6 265 63.8
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 2.4e-84 316.6 285 57.9
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 2.4e-84 316.6 266 60.9
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 2.4e-84 316.6 292 58.2
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 3.1e-84 316.2 266 61.3
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 4.0e-84 315.8 293 57.7
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 4.0e-84 315.8 219 70.3
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 6.9e-84 315.1 264 61.4
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 1.2e-83 314.3 278 59.4
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 1.2e-83 314.3 263 63.9
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 1.2e-83 314.3 247 64.0
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 2.0e-83 313.5 326 55.8
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 2.6e-83 313.2 285 56.8
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 2.6e-83 313.2 285 56.8
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 3.4e-83 312.8 271 60.9
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 3.4e-83 312.8 289 57.1
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 4.5e-83 312.4 299 55.9
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 5.8e-83 312.0 255 63.5
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 7.6e-83 311.6 266 60.9
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 1.0e-82 311.2 279 59.1
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 1.3e-82 310.8 236 67.4
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 1.7e-82 310.5 262 62.2
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 2.2e-82 310.1 244 66.4
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 2.9e-82 309.7 265 58.5
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 4.9e-82 308.9 333 52.3
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 8.4e-82 308.1 234 65.0
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 1.1e-81 307.8 247 65.2
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 1.1e-81 307.8 316 52.5
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 1.4e-81 307.4 316 52.2
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 4.2e-81 305.8 259 60.6
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 7.1e-81 305.1 265 61.5
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 9.3e-81 304.7 276 58.3
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 1.2e-80 304.3 280 55.7
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 1.6e-80 303.9 263 60.5
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 2.1e-80 303.5 282 54.6
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 2.1e-80 303.5 239 64.9
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 2.7e-80 303.1 245 64.1
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 2.7e-80 303.1 216 69.4
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 6.0e-80 302.0 349 51.3
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 6.0e-80 302.0 228 65.4
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 7.9e-80 301.6 253 62.5
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 7.9e-80 301.6 253 62.5
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 1.3e-79 300.8 247 64.0
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 1.8e-79 300.4 188 77.1
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 2.3e-79 300.1 317 53.0
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 3.0e-79 299.7 248 62.1
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 3.0e-79 299.7 248 62.1
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 6.7e-79 298.5 265 60.0
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 1.9e-78 297.0 254 62.2
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 2.5e-78 296.6 272 57.4
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 3.3e-78 296.2 310 53.9
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 4.3e-78 295.8 270 57.4
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 4.3e-78 295.8 234 63.7
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 7.4e-78 295.0 246 61.4
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 1.6e-77 293.9 273 57.5
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 4.8e-77 292.4 337 49.3
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 8.2e-77 291.6 260 58.1
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 1.1e-76 291.2 239 63.6
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.4e-76 290.0 271 57.2
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 2.4e-76 290.0 362 49.2
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.5e-75 287.3 271 56.8
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 3.4e-75 286.2 265 59.2
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 4.5e-75 285.8 271 56.5
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 7.6e-75 285.0 235 61.3
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 7.6e-75 285.0 283 55.5
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 1.0e-74 284.6 270 55.9
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 2.2e-74 283.5 213 65.7
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 3.2e-73 279.6 289 53.6
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 4.2e-73 279.3 227 61.7
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.6e-72 277.3 286 53.8
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 2.7e-72 276.6 188 72.3
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 1.0e-71 274.6 261 57.5
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 1.8e-71 273.9 243 57.6
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 2.3e-71 273.5 292 54.1
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 3.7e-69 266.2 182 70.9
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 4.1e-68 262.7 181 75.1
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 6.5e-66 255.4 205 62.9
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 1.7e-61 240.7 210 56.2
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 3.1e-60 236.5 258 48.4
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 6.9e-60 235.3 255 49.8
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 4.5e-59 232.6 260 48.5
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 5.0e-58 229.2 148 76.4
CDE07G0022 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 4.5e-51 206.1 137 81.8
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 1.3e-50 204.5 269 43.5
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 1.1e-49 201.4 121 78.5
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 1.9e-49 200.7 255 45.9
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 9.4e-49 198.4 167 56.9
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 4.0e-47 193.0 192 53.1
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 1.5e-46 191.0 192 53.1
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 5.3e-44 182.6 103 82.5
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 2.2e-29 134.0 79 75.9
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 1.4e-28 131.3 69 87.0
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 6.4e-21 105.9 169 41.4
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 2.3e-15 87.4 61 65.6
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 1.4e-07 61.6 135 30.4
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 6.8e-07 59.3 44 59.1


User provided reference genes

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