Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2650 Ceratophyllum demersum HOM05D003190 ORTHO05D003745 2.1e-71 272.3 142 100.0
CDE12G0792 Ceratophyllum demersum HOM05D003190 ORTHO05D003745 5.7e-53 211.1 113 95.6
PSO782G2887 Papaver somniferum HOM05D003190 ORTHO05D003745 9.7e-37 157.1 122 68.9
ATR0057G124 Amborella trichopoda HOM05D003190 ORTHO05D003745 1.3e-36 156.8 109 75.2
PSO063G4643 Papaver somniferum HOM05D003190 ORTHO05D003745 1.3e-36 156.8 122 68.9
Nn6g33831 Nelumbo nucifera HOM05D003190 ORTHO05D003745 3.7e-36 155.2 109 72.5
TAR375G0928 Trochodendron aralioides HOM05D003190 ORTHO05D003745 6.3e-36 154.5 109 72.5
Nn1g00857 Nelumbo nucifera HOM05D003190 ORTHO05D003745 3.1e-35 152.1 109 70.6
Cc02_g25080 Coffea canephora HOM05D003190 ORTHO05D003745 4.1e-35 151.8 109 71.6
TAR374G0382 Trochodendron aralioides HOM05D003190 ORTHO05D003745 4.1e-35 151.8 109 71.6
Peaxi162Scf00475g00516 Petunia axillaris HOM05D003190 ORTHO05D003745 2.0e-34 149.4 108 71.3
TWI59G1064 Tripterygium wilfordii HOM05D003190 ORTHO05D003745 2.0e-34 149.4 109 71.6
Migut.B01538 Erythranthe guttata HOM05D003190 ORTHO05D003745 3.5e-34 148.7 109 69.7
Lj7C545T16 Lonicera japonica HOM05D003190 ORTHO05D003745 3.5e-34 148.7 109 70.6
Oeu000052.1 Olea europaea HOM05D003190 ORTHO05D003745 4.5e-34 148.3 109 71.6
Dinv44067 Davidia involucrata HOM05D003190 ORTHO05D003745 5.9e-34 147.9 109 69.7
MSTRG.20693 Avicennia marina HOM05D003190 ORTHO05D003745 1.7e-33 146.4 109 70.6
Actinidia12646 Actinidia chinensis HOM05D003190 ORTHO05D003745 2.2e-33 146.0 109 67.9
CSS0020681 Camellia sinensis var. sinensis HOM05D003190 ORTHO05D003745 2.9e-33 145.6 124 63.7
Rhsim07G0035600 Rhododendron simsii HOM05D003190 ORTHO05D003745 2.9e-33 145.6 109 69.7
Nitab4.5_0012667g0010 Nicotiana tabacum HOM05D003190 ORTHO05D003745 5.0e-33 144.8 108 71.3
Dinv43620 Davidia involucrata HOM05D003190 ORTHO05D003745 6.5e-33 144.4 109 69.7
TWI14G0166 Tripterygium wilfordii HOM05D003190 ORTHO05D003745 6.5e-33 144.4 109 68.8
Duzib133G1461 Durio zibethinus HOM05D003190 ORTHO05D003745 8.5e-33 144.1 109 68.8
Duzib138G0899 Durio zibethinus HOM05D003190 ORTHO05D003745 1.9e-32 142.9 109 68.8
Hund27406 Selenicereus undatus HOM05D003190 ORTHO05D003745 1.9e-32 142.9 109 67.9
Nitab4.5_0004620g0020 Nicotiana tabacum HOM05D003190 ORTHO05D003745 2.5e-32 142.5 108 70.4
MSTRG.17130 Avicennia marina HOM05D003190 ORTHO05D003745 3.2e-32 142.1 109 66.1
Aqoxy3G02735 Aquilegia oxysepala HOM05D003190 ORTHO05D003745 4.2e-32 141.7 109 68.8
SGA_v2.0_scaffold52G19224 Striga asiatica HOM05D003190 ORTHO05D003745 4.2e-32 141.7 109 67.9
Thecc.01G394400 Theobroma cacao HOM05D003190 ORTHO05D003745 4.2e-32 141.7 109 67.0
Hund17090 Selenicereus undatus HOM05D003190 ORTHO05D003745 7.2e-32 141.0 109 67.9
Sc02g0003110 Simmondsia chinensis HOM05D003190 ORTHO05D003745 7.2e-32 141.0 109 65.1
Ciclev10021825m.g Citrus clementina HOM05D003190 ORTHO05D003745 9.4e-32 140.6 109 67.9
Gohir.D12G099800 Gossypium hirsutum HOM05D003190 ORTHO05D003745 9.4e-32 140.6 109 69.7
Gorai.008G108700 Gossypium raimondii HOM05D003190 ORTHO05D003745 9.4e-32 140.6 109 69.7
SGA_v2.0_scaffold153G36905 Striga asiatica HOM05D003190 ORTHO05D003745 9.4e-32 140.6 109 67.0
EL10Ac1g00758 Beta vulgaris HOM05D003190 ORTHO05D003745 1.2e-31 140.2 109 67.0
SEGI_01663 Sequoiadendron giganteum HOM05D003190 ORTHO05D003745 1.2e-31 140.2 122 64.8
Atru.chr5.131 Acer truncatum HOM05D003190 ORTHO05D003745 1.6e-31 139.8 109 68.8
Cpa.g.sc101.14 Carica papaya HOM05D003190 ORTHO05D003745 3.6e-31 138.7 109 67.0
Manes.01G272900 Manihot esculenta HOM05D003190 ORTHO05D003745 3.6e-31 138.7 109 67.0
Solyc01g090290.4 Solanum lycopersicum HOM05D003190 ORTHO05D003745 3.6e-31 138.7 108 68.5
vmacro13493 Vaccinium macrocarpon HOM05D003190 ORTHO05D003745 3.6e-31 138.7 124 61.3
AUR62013747 Chenopodium quinoa HOM05D003190 ORTHO05D003745 4.7e-31 138.3 109 67.0
Gohir.A12G096900 Gossypium hirsutum HOM05D003190 ORTHO05D003745 4.7e-31 138.3 109 67.9
Lsat_1_v5_gn_4_39820 Lactuca sativa HOM05D003190 ORTHO05D003745 4.7e-31 138.3 111 66.7
HanXRQChr06g0167931 Helianthus annuus HOM05D003190 ORTHO05D003745 6.1e-31 137.9 122 61.5
Potri.002G137400 Populus trichocarpa HOM05D003190 ORTHO05D003745 6.1e-31 137.9 109 67.0
Hma1.2p1_0674F.1_g201530 Hydrangea macrophylla HOM05D003190 ORTHO05D003745 8.0e-31 137.5 116 63.8
AUR62023404 Chenopodium quinoa HOM05D003190 ORTHO05D003745 1.0e-30 137.1 109 67.0
DCAR_029466 Daucus carota HOM05D003190 ORTHO05D003745 1.0e-30 137.1 124 62.1
CAN.G1473.15 Capsicum annuum HOM05D003190 ORTHO05D003745 1.4e-30 136.7 108 66.7
Migut.N01739 Erythranthe guttata HOM05D003190 ORTHO05D003745 1.4e-30 136.7 109 65.1
Gohir.D08G040200 Gossypium hirsutum HOM05D003190 ORTHO05D003745 1.4e-30 136.7 124 60.5
Sed0021185 Sechium edule HOM05D003190 ORTHO05D003745 1.4e-30 136.7 109 64.2
GSVIVG01018273001 Vitis vinifera HOM05D003190 ORTHO05D003745 1.4e-30 136.7 109 65.1
QL04p030379 Quercus lobata HOM05D003190 ORTHO05D003745 1.8e-30 136.3 109 66.1
Haze_02841 Corylus avellana HOM05D003190 ORTHO05D003745 2.3e-30 136.0 109 64.2
Gorai.004G039100 Gossypium raimondii HOM05D003190 ORTHO05D003745 2.3e-30 136.0 124 60.5
Gorai.007G085900 Gossypium raimondii HOM05D003190 ORTHO05D003745 2.3e-30 136.0 109 66.1
Cfa011075 Carpinus fangiana HOM05D003190 ORTHO05D003745 3.0e-30 135.6 109 64.2
FAN04G2686 Fragaria x ananassa HOM05D003190 ORTHO05D003745 3.0e-30 135.6 109 62.4
Prupe.5G061700 Prunus persica HOM05D003190 ORTHO05D003745 3.0e-30 135.6 109 62.4
FAN18G2349 Fragaria x ananassa HOM05D003190 ORTHO05D003745 4.0e-30 135.2 109 62.4
SalBow5G0141 Salvia bowleyana HOM05D003190 ORTHO05D003745 4.0e-30 135.2 122 60.7
Actinidia12147 Actinidia chinensis HOM05D003190 ORTHO05D003745 5.2e-30 134.8 124 58.1
Phvul.011G190600 Phaseolus vulgaris HOM05D003190 ORTHO05D003745 5.2e-30 134.8 110 64.5
ECA234G0556 Erigeron canadensis HOM05D003190 ORTHO05D003745 6.7e-30 134.4 112 63.4
Gohir.A11G075600 Gossypium hirsutum HOM05D003190 ORTHO05D003745 6.7e-30 134.4 109 64.2
Gohir.D11G080200 Gossypium hirsutum HOM05D003190 ORTHO05D003745 6.7e-30 134.4 109 64.2
Manes.05G054500 Manihot esculenta HOM05D003190 ORTHO05D003745 6.7e-30 134.4 109 66.1
Oeu063237.1 Olea europaea HOM05D003190 ORTHO05D003745 6.7e-30 134.4 109 62.4
VMungo1127G1897 Vigna mungo HOM05D003190 ORTHO05D003745 8.8e-30 134.0 110 64.5
FvH4_5g19860 Fragaria vesca HOM05D003190 ORTHO05D003745 1.2e-29 133.7 109 61.5
Glyma.13G187200 Glycine max HOM05D003190 ORTHO05D003745 1.2e-29 133.7 110 64.5
Eucgr.D01237 Eucalyptus grandis HOM05D003190 ORTHO05D003745 1.5e-29 133.3 109 64.2
FvH4_7g10110 Fragaria vesca HOM05D003190 ORTHO05D003745 1.5e-29 133.3 109 63.3
FAN13G1610 Fragaria x ananassa HOM05D003190 ORTHO05D003745 1.5e-29 133.3 109 61.5
arahy.Tifrunner.gnm1.ann1.9AB492 Arachis hypogaea HOM05D003190 ORTHO05D003745 2.0e-29 132.9 111 64.0
arahy.Tifrunner.gnm1.ann1.WK7TVH Arachis hypogaea HOM05D003190 ORTHO05D003745 2.0e-29 132.9 111 64.0
Gohir.A08G029500 Gossypium hirsutum HOM05D003190 ORTHO05D003745 2.0e-29 132.9 124 58.9
Lj9A558T43 Lonicera japonica HOM05D003190 ORTHO05D003745 2.0e-29 132.9 120 62.5
MD02G1211700 Malus domestica HOM05D003190 ORTHO05D003745 2.0e-29 132.9 109 64.2
PGR042G3195 Punica granatum HOM05D003190 ORTHO05D003745 2.0e-29 132.9 109 67.0
Sabra14G0034200 Salix brachista HOM05D003190 ORTHO05D003745 2.0e-29 132.9 109 65.1
TWI23G0403 Tripterygium wilfordii HOM05D003190 ORTHO05D003745 2.0e-29 132.9 130 60.0
CiPaw.13G026700 Carya illinoinensis HOM05D003190 ORTHO05D003745 2.6e-29 132.5 109 63.3
Ciclev10021722m.g Citrus clementina HOM05D003190 ORTHO05D003745 2.6e-29 132.5 111 66.7
MELO3C022274.2 Cucumis melo HOM05D003190 ORTHO05D003745 2.6e-29 132.5 109 62.4
Eucgr.L01589 Eucalyptus grandis HOM05D003190 ORTHO05D003745 2.6e-29 132.5 109 64.2
FAN08G1565 Fragaria x ananassa HOM05D003190 ORTHO05D003745 2.6e-29 132.5 109 60.6
Lalb_Chr19g0126531 Lupinus albus HOM05D003190 ORTHO05D003745 2.6e-29 132.5 111 62.2
MD04G1057800 Malus domestica HOM05D003190 ORTHO05D003745 2.6e-29 132.5 109 60.6
Potri.014G047200 Populus trichocarpa HOM05D003190 ORTHO05D003745 2.6e-29 132.5 109 66.1
Sopen01g036080 Solanum pennellii HOM05D003190 ORTHO05D003745 2.6e-29 132.5 108 66.7
CsaV3_6G008580 Cucumis sativus L. HOM05D003190 ORTHO05D003745 3.3e-29 132.1 109 62.4
CANSAT21G0456 Cannabis sativa HOM05D003190 ORTHO05D003745 4.4e-29 131.7 109 63.3
CANSAT21G1264 Cannabis sativa HOM05D003190 ORTHO05D003745 4.4e-29 131.7 109 63.3
Glyma.15G224900 Glycine max HOM05D003190 ORTHO05D003745 4.4e-29 131.7 110 63.6
THA.LOC104801488 Tarenaya hassleriana HOM05D003190 ORTHO05D003745 5.7e-29 131.3 109 60.6
Prupe.2G129800 Prunus persica HOM05D003190 ORTHO05D003745 7.5e-29 131.0 109 64.2
THA.LOC104814067 Tarenaya hassleriana HOM05D003190 ORTHO05D003745 7.5e-29 131.0 124 58.1
RcHm_v2.0_Chr1g0347681 Rosa chinensis HOM05D003190 ORTHO05D003745 9.7e-29 130.6 109 62.4
HPP92_001540 Vanilla planifolia HOM05D000263 ORTHO05D000213 9.7e-29 130.6 109 66.1
ClCG06G002540 Citrullus lanatus HOM05D003190 ORTHO05D003745 1.3e-28 130.2 109 61.5
Oeu020085.3 Olea europaea HOM05D003190 ORTHO05D003745 1.3e-28 130.2 148 52.0
RcHm_v2.0_Chr7g0204651 Rosa chinensis HOM05D003190 ORTHO05D003745 2.2e-28 129.4 111 60.4
ECA236G0031 Erigeron canadensis HOM05D003190 ORTHO05D003745 2.8e-28 129.0 110 61.8
HanXRQChr02g0046721 Helianthus annuus HOM05D003190 ORTHO05D003745 2.8e-28 129.0 111 62.2
Pp3c9_18560 Physcomitrium patens HOM05D003190 ORTHO05D003745 2.8e-28 129.0 122 59.0
Sp6g00030 Schrenkiella parvula HOM05D003190 ORTHO05D003745 3.7e-28 128.6 124 58.1
Lj1g0027839 Lotus japonicus HOM05D003190 ORTHO05D003745 4.8e-28 128.3 110 63.6
CARHR248010 Cardamine hirsuta HOM05D003190 ORTHO05D003745 8.2e-28 127.5 124 56.5
HanXRQChr13g0414471 Helianthus annuus HOM05D003190 ORTHO05D003745 8.2e-28 127.5 109 61.5
MD07G1107100 Malus domestica HOM05D003190 ORTHO05D003745 1.1e-27 127.1 109 60.6
QL12p009727 Quercus lobata HOM05D003190 ORTHO05D003745 1.1e-27 127.1 112 59.8
SGA_v2.0_scaffold43G16535 Striga asiatica HOM05D003190 ORTHO05D003745 1.1e-27 127.1 120 56.7
CiPaw.14G020800 Carya illinoinensis HOM05D003190 ORTHO05D003745 1.4e-27 126.7 109 58.7
MD07G1106500 Malus domestica HOM05D003190 ORTHO05D003745 2.4e-27 125.9 121 55.4
CARHR000240 Cardamine hirsuta HOM05D003190 ORTHO05D003745 3.1e-27 125.6 109 58.7
Thhalv10026057m.g Eutrema salsugineum HOM05D003190 ORTHO05D003745 3.1e-27 125.6 124 55.6
Thhalv10008523m.g Eutrema salsugineum HOM05D003190 ORTHO05D003745 4.1e-27 125.2 109 59.6
SHI13612 Sapria himalayana HOM05D003190 ORTHO05D003745 4.1e-27 125.2 110 62.7
Pp3c15_22100 Physcomitrium patens HOM05D003190 ORTHO05D003745 5.3e-27 124.8 122 58.2
Carub.0006s3723 Capsella rubella HOM05D003190 ORTHO05D003745 7.0e-27 124.4 124 57.3
Ca_08071_v3 Cicer arietinum L. HOM05D003190 ORTHO05D003745 7.0e-27 124.4 110 60.9
FAN10G1008 Fragaria x ananassa HOM05D003190 ORTHO05D003745 7.0e-27 124.4 101 63.4
vmacro21057 Vaccinium macrocarpon HOM05D003190 ORTHO05D003745 9.1e-27 124.0 131 53.4
FAN01G1555 Fragaria x ananassa HOM05D003190 ORTHO05D003745 1.2e-26 123.6 101 62.4
FAN03G0648 Fragaria x ananassa HOM05D003190 ORTHO05D003745 1.2e-26 123.6 101 63.4
AT1G02090 Arabidopsis thaliana HOM05D003190 ORTHO05D003745 1.6e-26 123.2 109 60.6
BcaC07g42340 Brassica carinata HOM05D003190 ORTHO05D003745 1.6e-26 123.2 124 53.2
A07p14830 Brassica napus HOM05D003190 ORTHO05D003745 1.6e-26 123.2 124 54.8
BraA07t29224Z Brassica rapa HOM05D003190 ORTHO05D003745 1.6e-26 123.2 124 54.8
Carub.0001s0013 Capsella rubella HOM05D003190 ORTHO05D003745 1.6e-26 123.2 124 56.5
Lalb_Chr03g0040361 Lupinus albus HOM05D003190 ORTHO05D003745 1.6e-26 123.2 111 56.8
Psat3g098680 Pisum sativum HOM05D003190 ORTHO05D003745 1.6e-26 123.2 110 60.0
BcaC06g34922 Brassica carinata HOM05D003190 ORTHO05D003745 2.0e-26 122.9 124 54.0
AL1G10140 Arabidopsis lyrata HOM05D003190 ORTHO05D003745 2.7e-26 122.5 124 55.6
TPR.G14100 Trifolium pratense HOM05D003190 ORTHO05D003745 2.7e-26 122.5 110 57.3
CSS0044756 Camellia sinensis var. sinensis HOM05D003190 ORTHO05D003745 5.9e-26 121.3 109 62.4
Medtr7g081735 Medicago truncatula HOM05D003190 ORTHO05D003745 7.7e-26 120.9 110 59.1
BcaC07g42436 Brassica carinata HOM05D003190 ORTHO05D003745 1.0e-25 120.6 126 50.8
A09p69340 Brassica napus HOM05D003190 ORTHO05D003745 1.0e-25 120.6 126 50.8
BolC8t52924H Brassica oleracea HOM05D003190 ORTHO05D003745 1.0e-25 120.6 126 50.8
Sp1g00180 Schrenkiella parvula HOM05D003190 ORTHO05D003745 1.0e-25 120.6 124 54.8
BcaB03g14242 Brassica carinata HOM05D003190 ORTHO05D003745 1.3e-25 120.2 124 54.0
C07p21780 Brassica napus HOM05D003190 ORTHO05D003745 1.3e-25 120.2 125 54.4
BolC7t42709H Brassica oleracea HOM05D003190 ORTHO05D003745 1.3e-25 120.2 125 54.4
FAN06G0700 Fragaria x ananassa HOM05D003190 ORTHO05D003745 1.3e-25 120.2 101 63.4
BraA09t42279Z Brassica rapa HOM05D003190 ORTHO05D003745 2.2e-25 119.4 126 50.8
Glyma.18G252100 Glycine max HOM05D003190 ORTHO05D003745 3.8e-25 118.6 126 48.4
SMO239G0056 Selaginella moellendorffii HOM05D003190 ORTHO05D003745 5.0e-25 118.2 122 52.5
PGSC0003DMG400026050 Solanum tuberosum HOM05D003190 ORTHO05D003745 1.5e-24 116.7 152 48.0
AagrBONN_evm.TU.Sc2ySwM_228.489 Anthoceros agrestis HOM05D003190 ORTHO05D003745 3.2e-24 115.5 122 53.3
Mapoly0041s0006 Marchantia polymorpha HOM05D003190 ORTHO05D003745 5.5e-24 114.8 122 53.3
Zm00001eb105310 Zea mays HOM05D003190 ORTHO05D003745 1.6e-23 113.2 112 54.5
COL.COLO4_12413 Corchorus olitorius HOM05D003190 ORTHO05D003745 2.1e-23 112.8 82 68.3
Aa31LG1G11460 Aethionema arabicum HOM05D003190 ORTHO05D003745 3.6e-23 112.1 124 52.4
Zm00001eb321750 Zea mays HOM05D003190 ORTHO05D003745 8.0e-23 110.9 112 54.5
Potri.003G081066 Populus trichocarpa HOM05D003190 ORTHO05D003745 8.8e-22 107.5 114 56.1
FAN06G3948 Fragaria x ananassa HOM05D003190 ORTHO05D003745 2.4e-19 99.4 79 62.0
BcaB03g13632 Brassica carinata HOM05D003190 ORTHO05D003745 2.5e-16 89.4 109 48.6
MBI04_g07222_MAGBIO Magnolia biondii HOM05D003190 ORTHO05D003745 1.2e-15 87.0 57 71.9
COL.COLO4_04307 Corchorus olitorius HOM05D003190 ORTHO05D003745 8.0e-15 84.3 78 55.1
Cre16.g651500 Chlamydomonas reinhardtii HOM05D003190 ORTHO05D003745 3.0e-14 82.4 99 43.4
GSVIVG01004797001 Vitis vinifera HOM05D003190 ORTHO05D003745 2.6e-13 79.3 60 63.3
Actinidia02786 Actinidia chinensis HOM05D003190 ORTHO05D003745 7.5e-13 77.8 75 57.3
Peaxi162Scf00103g00518 Petunia axillaris HOM05D003190 ORTHO05D003745 1.7e-12 76.6 73 57.5
Sabra08G0153900 Salix brachista HOM05D003190 ORTHO05D003745 1.7e-12 76.6 97 45.4
VMungo1383G3682 Vigna mungo HOM05D003190 ORTHO05D003745 1.7e-12 76.6 82 45.1
Ah.05g177860 Amaranthus hybridus HOM05D003190 ORTHO05D003745 6.3e-12 74.7 109 42.2
Sabra12G0045300 Salix brachista HOM05D004666 ORTHO05D005822 1.4e-11 73.6 131 36.6
Actinidia26682 Actinidia chinensis HOM05D003190 ORTHO05D003745 1.0e-09 67.4 80 50.0
Sabra03G0030800 Salix brachista HOM05D003190 ORTHO05D003745 2.3e-09 66.2 54 63.0
PRCOL_00006780 Prasinoderma coloniale HOM05D003190 ORTHO05D003745 8.6e-09 64.3 78 47.4
MCO16G398 Micromonas commoda HOM05D003190 ORTHO05D003745 1.5e-08 63.5 109 35.8
CBR_g6296 Chara braunii HOM05D000019 ORTHO05D000002 1.9e-08 63.2 69 52.2
Sabra18G0023800 Salix brachista HOM05D000009 ORTHO05D000008 4.3e-08 62.0 83 47.0
Aa31LG5G50 Aethionema arabicum HOM05D003190 ORTHO05D003745 1.2e-07 60.5 54 59.3
GSVIVG01004796001 Vitis vinifera HOM05D017410 ORTHO05D019204 8.0e-07 57.8 56 53.6


User provided reference genes

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