Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 4.4e-141 504.6 250 100.0
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 6.6e-97 357.8 248 66.5
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 6.6e-97 357.8 246 66.7
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 1.5e-96 356.7 244 66.8
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 4.3e-96 355.1 246 66.3
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 1.2e-95 353.6 248 67.7
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 2.1e-95 352.8 246 66.3
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 2.3e-94 349.4 246 65.9
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 2.3e-94 349.4 246 65.9
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 4.0e-94 348.6 246 67.5
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 5.2e-94 348.2 244 65.6
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 8.9e-94 347.4 246 65.9
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 8.9e-94 347.4 248 66.5
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 2.0e-93 346.3 246 65.0
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 5.8e-93 344.7 248 62.5
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 9.9e-93 344.0 248 64.1
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 1.3e-92 343.6 248 66.5
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 2.2e-92 342.8 246 63.8
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 4.9e-92 341.7 248 63.3
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 6.4e-92 341.3 246 65.4
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 8.4e-92 340.9 248 62.9
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 8.4e-92 340.9 248 63.7
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 1.1e-91 340.5 248 65.3
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 1.4e-91 340.1 246 63.4
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 1.9e-91 339.7 246 63.4
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 5.4e-91 338.2 250 63.2
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 1.2e-90 337.0 248 61.7
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 1.2e-90 337.0 244 66.8
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 1.6e-90 336.7 246 63.4
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 1.6e-90 336.7 238 65.1
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 2.1e-90 336.3 246 61.0
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 4.6e-90 335.1 246 65.4
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 7.8e-90 334.3 246 63.8
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 7.8e-90 334.3 246 65.0
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 1.0e-89 334.0 246 64.6
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 2.3e-89 332.8 246 64.6
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 3.0e-89 332.4 246 64.6
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 3.0e-89 332.4 246 61.4
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 3.9e-89 332.0 246 64.6
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 3.9e-89 332.0 246 60.6
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 3.9e-89 332.0 246 64.6
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 6.6e-89 331.3 246 65.0
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 6.6e-89 331.3 246 67.1
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 6.6e-89 331.3 244 61.9
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 1.1e-88 330.5 246 61.8
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 1.1e-88 330.5 246 61.4
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 1.5e-88 330.1 235 65.5
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 2.5e-88 329.3 246 63.4
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 3.3e-88 328.9 246 62.6
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 4.3e-88 328.6 246 65.0
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 5.6e-88 328.2 246 61.0
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 7.3e-88 327.8 238 63.4
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 9.6e-88 327.4 246 65.0
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 1.2e-87 327.0 246 62.6
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 1.6e-87 326.6 246 61.8
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 2.8e-87 325.9 246 63.0
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 2.8e-87 325.9 246 63.0
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 6.2e-87 324.7 246 62.6
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 8.1e-87 324.3 246 61.0
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 1.8e-86 323.2 246 60.2
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 1.8e-86 323.2 246 61.4
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 2.4e-86 322.8 246 62.2
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 3.1e-86 322.4 246 63.8
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 4.0e-86 322.0 246 60.2
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 4.0e-86 322.0 244 63.1
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 6.9e-86 321.2 246 62.2
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 6.9e-86 321.2 246 62.2
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 6.9e-86 321.2 246 62.2
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 8.9e-86 320.9 246 59.8
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 1.2e-85 320.5 246 59.3
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 1.2e-85 320.5 246 61.8
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 1.5e-85 320.1 311 51.8
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 3.4e-85 318.9 246 59.3
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 5.8e-85 318.2 248 61.3
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 9.9e-85 317.4 244 61.9
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 2.2e-84 316.2 246 62.2
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 3.8e-84 315.5 246 62.6
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 3.8e-84 315.5 246 63.0
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 3.2e-83 312.4 246 61.8
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 4.2e-83 312.0 246 57.3
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 4.2e-83 312.0 213 68.1
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 5.4e-83 311.6 239 59.0
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 7.1e-83 311.2 246 58.5
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 7.1e-83 311.2 246 58.5
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 2.7e-82 309.3 246 56.5
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 3.5e-82 308.9 246 58.5
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 1.0e-81 307.4 225 64.9
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.4e-78 297.0 218 64.7
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 9.0e-78 294.3 206 66.0
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 2.0e-77 293.1 246 53.3
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 1.3e-76 290.4 228 60.1
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 3.2e-75 285.8 226 62.4
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 3.0e-73 279.3 246 58.1
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 1.9e-72 276.6 248 54.8
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 3.3e-72 275.8 193 67.9
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 1.1e-70 270.8 244 49.2
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 2.2e-68 263.1 247 50.6
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 1.3e-65 253.8 200 57.5
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 6.5e-60 235.0 209 49.8
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 8.2e-55 218.0 246 48.8
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 3.8e-52 209.1 248 47.6
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 1.1e-48 197.6 139 66.2
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 4.1e-46 189.1 132 67.4
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 2.6e-45 186.4 337 33.8
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 1.0e-44 184.5 147 57.1
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 5.1e-41 172.2 246 38.2
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 2.0e-40 170.2 144 53.5
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 9.7e-40 167.9 209 39.7
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 4.7e-34 149.1 121 53.7
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 2.2e-28 130.2 107 58.9
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 4.4e-24 115.9 79 65.8
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 9.7e-24 114.8 165 38.8


User provided reference genes

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