Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2645 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 4.4e-56 221.1 113 100.0
TAR020G0003 Trochodendron aralioides HOM05D006190 ORTHO05D008260 2.9e-28 128.6 119 53.8
Nn1g07299 Nelumbo nucifera HOM05D006190 ORTHO05D008260 8.6e-28 127.1 119 55.5
Aqoxy3G00055 Aquilegia oxysepala HOM05D006190 ORTHO05D008260 8.0e-26 120.6 121 52.9
GSVIVG01030506001 Vitis vinifera HOM05D006190 ORTHO05D008260 3.0e-25 118.6 115 51.3
Sp4g13810 Schrenkiella parvula HOM05D006190 ORTHO05D008260 2.0e-24 115.9 112 49.1
CSS0039152 Camellia sinensis var. sinensis HOM05D006190 ORTHO05D008260 2.6e-24 115.5 119 49.6
Cfa014317 Carpinus fangiana HOM05D006190 ORTHO05D008260 2.6e-24 115.5 115 50.4
Haze_12765 Corylus avellana HOM05D006190 ORTHO05D008260 7.5e-24 114.0 115 49.6
TWI36G1256 Tripterygium wilfordii HOM05D006190 ORTHO05D008260 2.2e-23 112.5 115 48.7
AT2G31340 Arabidopsis thaliana HOM05D006190 ORTHO05D008260 2.9e-23 112.1 112 48.2
Thhalv10016459m.g Eutrema salsugineum HOM05D006190 ORTHO05D008260 3.7e-23 111.7 112 47.3
Sed0027843 Sechium edule HOM05D006190 ORTHO05D008260 4.9e-23 111.3 115 47.8
COL.COLO4_21885 Corchorus olitorius HOM05D006190 ORTHO05D008260 6.4e-23 110.9 114 49.1
Carub.0004s1265 Capsella rubella HOM05D006190 ORTHO05D008260 8.3e-23 110.5 112 47.3
CsaV3_6G037760 Cucumis sativus L. HOM05D006190 ORTHO05D008260 8.3e-23 110.5 115 49.6
Dinv39750 Davidia involucrata HOM05D006190 ORTHO05D008260 8.3e-23 110.5 117 47.9
AL4G26570 Arabidopsis lyrata HOM05D006190 ORTHO05D008260 1.1e-22 110.2 112 46.4
Gohir.A07G082100 Gossypium hirsutum HOM05D006190 ORTHO05D008260 1.1e-22 110.2 114 49.1
Gohir.D07G088600 Gossypium hirsutum HOM05D006190 ORTHO05D008260 1.1e-22 110.2 114 49.1
Thecc.01G182400 Theobroma cacao HOM05D006190 ORTHO05D008260 1.1e-22 110.2 114 50.0
Gorai.001G095000 Gossypium raimondii HOM05D006190 ORTHO05D008260 1.4e-22 109.8 114 49.1
Potri.002G224300 Populus trichocarpa HOM05D006190 ORTHO05D008260 1.4e-22 109.8 119 48.7
CARHR124960 Cardamine hirsuta HOM05D006190 ORTHO05D008260 1.8e-22 109.4 112 47.3
Sabra02G0171700 Salix brachista HOM05D006190 ORTHO05D008260 1.8e-22 109.4 119 48.7
BcaB02g10385 Brassica carinata HOM05D006190 ORTHO05D008260 3.2e-22 108.6 112 47.3
QL08p030638 Quercus lobata HOM05D006190 ORTHO05D008260 3.2e-22 108.6 116 46.6
THA.LOC104800883 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 3.2e-22 108.6 112 46.4
PGR083G2874 Punica granatum HOM05D006190 ORTHO05D008260 4.1e-22 108.2 115 46.1
Aa31LG5G5620 Aethionema arabicum HOM05D006190 ORTHO05D008260 9.2e-22 107.1 112 45.5
MELO3C014435.2 Cucumis melo HOM05D006190 ORTHO05D008260 1.2e-21 106.7 115 47.8
THA.LOC104798591 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 3.5e-21 105.1 115 46.1
ClCG09G011200 Citrullus lanatus HOM05D006190 ORTHO05D008260 4.6e-21 104.8 115 48.7
CiPaw.03G155000 Carya illinoinensis HOM05D006190 ORTHO05D008260 5.9e-21 104.4 115 47.0
Ciclev10017756m.g Citrus clementina HOM05D006190 ORTHO05D008260 5.9e-21 104.4 116 45.7
Actinidia09748 Actinidia chinensis HOM05D006190 ORTHO05D008260 1.0e-20 103.6 117 47.9
Prupe.3G210000 Prunus persica HOM05D006190 ORTHO05D008260 1.0e-20 103.6 115 43.5
Manes.13G065900 Manihot esculenta HOM05D006190 ORTHO05D008260 2.3e-20 102.4 120 46.7
FAN02G1605 Fragaria x ananassa HOM05D006190 ORTHO05D008260 3.0e-20 102.1 117 44.4
BcaC02g11229 Brassica carinata HOM05D006190 ORTHO05D008260 3.9e-20 101.7 113 46.9
Cpa.g.sc132.24 Carica papaya HOM05D006190 ORTHO05D008260 3.9e-20 101.7 116 44.0
MD17G1106200 Malus domestica HOM05D006190 ORTHO05D008260 5.0e-20 101.3 115 45.2
A05p14270 Brassica napus HOM05D006190 ORTHO05D008260 8.6e-20 100.5 113 46.9
MD09G1114700 Malus domestica HOM05D006190 ORTHO05D008260 8.6e-20 100.5 115 45.2
Eucgr.K00752 Eucalyptus grandis HOM05D006190 ORTHO05D008260 1.1e-19 100.1 115 44.3
FvH4_6g42100 Fragaria vesca HOM05D006190 ORTHO05D008260 1.9e-19 99.4 117 43.6
Ca_16289_v3 Cicer arietinum L. HOM05D006190 ORTHO05D008260 2.5e-19 99.0 113 43.4
FAN10G3459 Fragaria x ananassa HOM05D006190 ORTHO05D008260 2.5e-19 99.0 117 43.6
PSO541G5374 Papaver somniferum HOM05D006190 ORTHO05D008260 4.3e-19 98.2 115 46.1
PSO675G0778 Papaver somniferum HOM05D006190 ORTHO05D008260 4.3e-19 98.2 115 46.1
Lj6g0020329 Lotus japonicus HOM05D006190 ORTHO05D008260 5.6e-19 97.8 114 47.4
EL10Ac8g20037 Beta vulgaris HOM05D006190 ORTHO05D008260 9.5e-19 97.1 117 43.6
FAN14G2650 Fragaria x ananassa HOM05D006190 ORTHO05D008260 9.5e-19 97.1 117 42.7
Lalb_Chr04g0264321 Lupinus albus HOM05D006190 ORTHO05D008260 9.5e-19 97.1 113 42.5
MBI19_g03678_MAGBIO Magnolia biondii HOM05D006190 ORTHO05D008260 9.5e-19 97.1 113 47.8
FAN05G0691 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.2e-18 96.7 117 42.7
Lsat_1_v5_gn_2_93981 Lactuca sativa HOM05D006190 ORTHO05D008260 3.6e-18 95.1 118 40.7
Atru.chr6.3259 Acer truncatum HOM05D006190 ORTHO05D008260 4.7e-18 94.7 121 42.1
RcHm_v2.0_Chr2g0158021 Rosa chinensis HOM05D006190 ORTHO05D008260 4.7e-18 94.7 116 43.1
Rhsim06G0167400 Rhododendron simsii HOM05D006190 ORTHO05D008260 8.0e-18 94.0 116 43.1
arahy.Tifrunner.gnm1.ann1.5R2QIE Arachis hypogaea HOM05D006190 ORTHO05D008260 1.1e-17 93.6 119 43.7
VMungo1127G1525 Vigna mungo HOM05D006190 ORTHO05D008260 1.1e-17 93.6 112 42.9
arahy.Tifrunner.gnm1.ann1.BBUS42 Arachis hypogaea HOM05D006190 ORTHO05D008260 1.8e-17 92.8 119 43.7
FAN18G3300 Fragaria x ananassa HOM05D006190 ORTHO05D008260 2.3e-17 92.4 117 42.7
Lsat_1_v5_gn_9_105860 Lactuca sativa HOM05D006190 ORTHO05D008260 3.1e-17 92.0 118 39.0
Rhsim04G0034400 Rhododendron simsii HOM05D006190 ORTHO05D008260 3.1e-17 92.0 116 43.1
Psat5g111240 Pisum sativum HOM05D006190 ORTHO05D008260 5.2e-17 91.3 113 39.8
AUR62000500 Chenopodium quinoa HOM05D006190 ORTHO05D008260 8.9e-17 90.5 118 40.7
Sc06g0009680 Simmondsia chinensis HOM05D006190 ORTHO05D008260 8.9e-17 90.5 120 42.5
vmacro12161 Vaccinium macrocarpon HOM05D006190 ORTHO05D008260 8.9e-17 90.5 115 43.5
Phvul.006G013000 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 1.2e-16 90.1 113 42.5
AUR62006846 Chenopodium quinoa HOM05D006190 ORTHO05D008260 2.0e-16 89.4 118 39.8
Phvul.011G111400 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 2.6e-16 89.0 113 41.6
Hund00609 Selenicereus undatus HOM05D006190 ORTHO05D008260 4.4e-16 88.2 116 43.1
Medtr3g080550 Medicago truncatula HOM05D006190 ORTHO05D008260 5.8e-16 87.8 113 41.6
Rhsim04G0027600 Rhododendron simsii HOM05D006190 ORTHO05D008260 5.8e-16 87.8 116 40.5
Glyma.20G058400 Glycine max HOM05D006190 ORTHO05D008260 9.8e-16 87.0 113 43.4
Rhsim04G0033900 Rhododendron simsii HOM05D006190 ORTHO05D008260 9.8e-16 87.0 116 40.5
HanXRQChr03g0075981 Helianthus annuus HOM05D006190 ORTHO05D008260 1.3e-15 86.7 118 39.0
TPR.G342 Trifolium pratense HOM05D006190 ORTHO05D008260 1.3e-15 86.7 113 40.7
Ah.06g190910 Amaranthus hybridus HOM05D006190 ORTHO05D008260 4.1e-14 81.6 118 40.7
DCAR_019742 Daucus carota HOM05D006190 ORTHO05D008260 2.7e-13 79.0 112 33.9
Nitab4.5_0000019g0350 Nicotiana tabacum HOM05D006190 ORTHO05D008260 4.6e-13 78.2 117 35.9
MSTRG.8117 Avicennia marina HOM05D006190 ORTHO05D008260 6.0e-13 77.8 118 34.7
Nitab4.5_0006063g0030 Nicotiana tabacum HOM05D006190 ORTHO05D008260 1.0e-12 77.0 117 35.9
Oeu015050.1 Olea europaea HOM05D006190 ORTHO05D008260 1.0e-12 77.0 122 37.7
Sopen05g026250 Solanum pennellii HOM05D006190 ORTHO05D008260 2.3e-12 75.9 117 36.8
Solyc05g042120.4 Solanum lycopersicum HOM05D006190 ORTHO05D008260 3.0e-12 75.5 117 35.9
Migut.F01671 Erythranthe guttata HOM05D006190 ORTHO05D008260 6.6e-12 74.3 118 35.6
HPP92_020505 Vanilla planifolia HOM05D006190 ORTHO05D008260 6.6e-12 74.3 113 33.6
SHI10054 Sapria himalayana HOM05D006190 ORTHO05D000001 1.5e-11 73.2 120 35.8
Sopen11g022430 Solanum pennellii HOM05D006190 ORTHO05D008260 1.5e-11 73.2 117 35.9
CAN.G795.2 Capsicum annuum HOM05D006190 ORTHO05D008260 1.2e-10 70.1 117 35.0
Peaxi162Scf00100g01525 Petunia axillaris HOM05D006190 ORTHO05D008260 1.4e-09 66.6 120 33.3
ATR0736G101 Amborella trichopoda HOM05D006190 ORTHO05D008260 1.7e-07 59.7 132 31.1
C04p19010 Brassica napus HOM05D006190 ORTHO05D008260 3.7e-07 58.5 55 50.9
ECA240G2645 Erigeron canadensis HOM05D006190 ORTHO05D008260 8.3e-07 57.4 119 33.6


User provided reference genes

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