Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2610 Ceratophyllum demersum HOM05D003681 ORTHO05D004703 0.0e+00 1342.8 693 100.0
CDE07G0234 Ceratophyllum demersum HOM05D003681 ORTHO05D004703 0.0e+00 1117.4 729 82.9
TAR374G1530 Trochodendron aralioides HOM05D003681 ORTHO05D004703 8.2e-214 747.7 723 58.2
TAR622G1195 Trochodendron aralioides HOM05D003681 ORTHO05D004703 5.0e-211 738.4 725 57.5
MBI11_g11079_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D004703 4.2e-210 735.3 727 56.7
GSVIVG01001851001 Vitis vinifera HOM05D003681 ORTHO05D004703 1.7e-206 723.4 728 57.0
CiPaw.04G033000 Carya illinoinensis HOM05D003681 ORTHO05D004703 2.4e-205 719.5 728 58.2
Aqoxy3G01435 Aquilegia oxysepala HOM05D003681 ORTHO05D004703 3.5e-204 715.7 725 55.6
Nn4g22444 Nelumbo nucifera HOM05D003681 ORTHO05D004703 6.5e-203 711.4 731 56.9
Haze_14813 Corylus avellana HOM05D003681 ORTHO05D004703 8.5e-203 711.1 726 57.2
QL02p072923 Quercus lobata HOM05D003681 ORTHO05D004703 1.5e-202 710.3 730 56.8
Thecc.04G027500 Theobroma cacao HOM05D003681 ORTHO05D004703 1.2e-201 707.2 723 55.9
CiPaw.03G050400 Carya illinoinensis HOM05D003681 ORTHO05D004703 2.1e-201 706.4 728 55.9
PSO017G2495 Papaver somniferum HOM05D003681 ORTHO05D004703 8.0e-201 704.5 731 56.1
Atru.chr6.2486 Acer truncatum HOM05D003681 ORTHO05D004703 1.5e-199 700.3 721 56.4
CsaV3_3G027310 Cucumis sativus L. HOM05D003681 ORTHO05D004703 2.0e-199 699.9 728 56.0
Duzib187G0106 Durio zibethinus HOM05D003681 ORTHO05D004703 2.6e-199 699.5 720 55.4
Eucgr.I01693 Eucalyptus grandis HOM05D003681 ORTHO05D004703 2.6e-199 699.5 729 55.0
Cpa.g.sc130.41 Carica papaya HOM05D003681 ORTHO05D004703 6.3e-198 694.9 728 55.6
Cfa007279 Carpinus fangiana HOM05D003681 ORTHO05D004703 1.1e-197 694.1 714 56.9
ClCG05G013220 Citrullus lanatus HOM05D003681 ORTHO05D004703 7.0e-197 691.4 723 55.5
PGR142G3554 Punica granatum HOM05D003681 ORTHO05D004703 1.2e-196 690.6 726 55.4
Ciclev10014307m.g Citrus clementina HOM05D003681 ORTHO05D004703 2.0e-196 689.9 717 55.5
Potri.001G337700 Populus trichocarpa HOM05D003681 ORTHO05D004703 2.7e-196 689.5 725 55.6
Dinv33384 Davidia involucrata HOM05D003681 ORTHO05D004703 2.9e-195 686.0 728 55.2
Manes.17G107300 Manihot esculenta HOM05D003681 ORTHO05D004703 2.9e-195 686.0 722 53.5
Potri.001G337600 Populus trichocarpa HOM05D003681 ORTHO05D004703 3.8e-195 685.6 727 55.2
Gohir.A11G065000 Gossypium hirsutum HOM05D003681 ORTHO05D004703 8.5e-195 684.5 721 54.8
MD17G1018200 Malus domestica HOM05D003681 ORTHO05D004703 8.5e-195 684.5 727 55.2
MD09G1017400 Malus domestica HOM05D003681 ORTHO05D004703 1.5e-194 683.7 721 55.6
PSO478G5006 Papaver somniferum HOM05D003681 ORTHO05D004703 2.5e-194 682.9 726 55.2
Dinv25694 Davidia involucrata HOM05D003681 ORTHO05D004703 7.2e-194 681.4 726 55.2
COL.COLO4_29274 Corchorus olitorius HOM05D003681 ORTHO05D004703 9.4e-194 681.0 728 53.6
Actinidia18423 Actinidia chinensis HOM05D003681 ORTHO05D004703 1.6e-193 680.2 726 54.7
Sed0015235 Sechium edule HOM05D003681 ORTHO05D004703 2.1e-193 679.9 721 56.2
Prupe.3G299500 Prunus persica HOM05D003681 ORTHO05D004703 2.7e-193 679.5 727 54.2
Sed0021158 Sechium edule HOM05D003681 ORTHO05D004703 6.1e-193 678.3 723 55.2
Gohir.D09G033600 Gossypium hirsutum HOM05D003681 ORTHO05D004703 1.0e-192 677.6 736 53.9
Gorai.006G038600 Gossypium raimondii HOM05D003681 ORTHO05D004703 1.0e-192 677.6 736 53.9
Lj7A605G77 Lonicera japonica HOM05D003681 ORTHO05D004703 1.8e-192 676.8 725 55.6
Phvul.004G057300 Phaseolus vulgaris HOM05D003681 ORTHO05D004703 1.8e-192 676.8 725 55.3
CANSAT64G2654 Cannabis sativa HOM05D003681 ORTHO05D004703 4.0e-192 675.6 733 54.4
CSS0025950 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 1.2e-191 674.1 728 54.4
Actinidia16950 Actinidia chinensis HOM05D003681 ORTHO05D004703 1.5e-191 673.7 727 54.6
arahy.Tifrunner.gnm1.ann1.0QF2GW Arachis hypogaea HOM05D003681 ORTHO05D004703 4.4e-191 672.2 721 54.9
TWI12G0555 Tripterygium wilfordii HOM05D003681 ORTHO05D004703 9.8e-191 671.0 730 54.7
Hund06716 Selenicereus undatus HOM05D003681 ORTHO05D004703 1.7e-190 670.2 719 54.1
THA.LOC104805345 Tarenaya hassleriana HOM05D003681 ORTHO05D004703 2.8e-190 669.5 728 53.7
CAN.G473.58 Capsicum annuum HOM05D003681 ORTHO05D004703 3.7e-190 669.1 724 54.4
Gohir.A09G033400 Gossypium hirsutum HOM05D003681 ORTHO05D004703 3.7e-190 669.1 736 53.3
Glyma.05G073400 Glycine max HOM05D003681 ORTHO05D004703 4.8e-190 668.7 720 54.9
Peaxi162Scf00420g00351 Petunia axillaris HOM05D003681 ORTHO05D004703 6.3e-190 668.3 720 54.6
Manes.15G156300 Manihot esculenta HOM05D003681 ORTHO05D004703 8.3e-190 667.9 721 54.2
PGSC0003DMG400020227 Solanum tuberosum HOM05D003681 ORTHO05D004703 8.3e-190 667.9 722 54.7
RcHm_v2.0_Chr2g0174171 Rosa chinensis HOM05D003681 ORTHO05D004703 1.8e-189 666.8 726 53.7
VMungo0464G1197 Vigna mungo HOM05D003681 ORTHO05D004703 1.8e-189 666.8 720 54.6
TWI36G0744 Tripterygium wilfordii HOM05D003681 ORTHO05D004703 3.1e-189 666.0 725 53.7
Glyma.19G077600 Glycine max HOM05D003681 ORTHO05D004703 7.0e-189 664.8 721 54.8
Aa31LG9G900 Aethionema arabicum HOM05D003681 ORTHO05D004703 2.7e-188 662.9 728 52.6
Gohir.D11G069300 Gossypium hirsutum HOM05D003681 ORTHO05D004703 7.7e-188 661.4 718 54.2
Cc07_g00400 Coffea canephora HOM05D003681 ORTHO05D004703 1.7e-187 660.2 721 54.6
TAR371G0788 Trochodendron aralioides HOM05D003681 ORTHO05D004703 2.3e-187 659.8 724 54.3
Gorai.007G074100 Gossypium raimondii HOM05D003681 ORTHO05D004703 3.8e-187 659.1 718 54.2
CARHR213770 Cardamine hirsuta HOM05D003681 ORTHO05D004703 6.6e-187 658.3 730 53.2
Sc03g0006880 Simmondsia chinensis HOM05D003681 ORTHO05D004703 6.6e-187 658.3 713 52.9
Sopen02g038450 Solanum pennellii HOM05D003681 ORTHO05D004703 8.6e-187 657.9 719 54.1
Lj2g0006828 Lotus japonicus HOM05D003681 ORTHO05D004703 1.1e-186 657.5 721 54.2
Solyc02g093810.3 Solanum lycopersicum HOM05D003681 ORTHO05D004703 1.5e-186 657.1 720 53.8
CSS0035050 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 1.9e-186 656.8 722 53.5
PGSC0003DMG400006971 Solanum tuberosum HOM05D003681 ORTHO05D004703 1.9e-186 656.8 722 53.9
Thhalv10027657m.g Eutrema salsugineum HOM05D003681 ORTHO05D004703 2.5e-186 656.4 728 53.0
AL7G49000 Arabidopsis lyrata HOM05D003681 ORTHO05D004703 3.3e-186 656.0 729 52.9
EL10Ac4g08610 Beta vulgaris HOM05D003681 ORTHO05D004703 7.2e-186 654.8 720 53.8
Sp7g01150 Schrenkiella parvula HOM05D003681 ORTHO05D004703 9.5e-186 654.4 728 52.5
Gohir.D10G085200 Gossypium hirsutum HOM05D003681 ORTHO05D004703 1.6e-185 653.7 721 52.6
AT5G40740 Arabidopsis thaliana HOM05D003681 ORTHO05D004703 2.8e-185 652.9 729 52.8
Carub.0007s3474 Capsella rubella HOM05D003681 ORTHO05D004703 2.8e-185 652.9 732 52.5
HanXRQChr07g0199161 Helianthus annuus HOM05D003681 ORTHO05D004703 4.7e-185 652.1 720 53.9
Lalb_Chr02g0157941 Lupinus albus HOM05D003681 ORTHO05D004703 4.7e-185 652.1 720 53.1
BraA04t17035Z Brassica rapa HOM05D003681 ORTHO05D004703 8.0e-185 651.4 736 52.6
Migut.H00059 Erythranthe guttata HOM05D003681 ORTHO05D004703 1.0e-184 651.0 721 54.0
Gorai.011G093100 Gossypium raimondii HOM05D003681 ORTHO05D004703 3.0e-184 649.4 721 52.4
Sopen02g017120 Solanum pennellii HOM05D003681 ORTHO05D004703 8.9e-184 647.9 721 53.7
vmacro18313 Vaccinium macrocarpon HOM05D003681 ORTHO05D004703 8.9e-184 647.9 722 52.5
SGA_v2.0_scaffold18G08242 Striga asiatica HOM05D003681 ORTHO05D004703 1.2e-183 647.5 746 52.8
Sabra16G0218500 Salix brachista HOM05D003681 ORTHO05D004703 1.5e-183 647.1 730 52.9
MSTRG.3111 Avicennia marina HOM05D003681 ORTHO05D004703 4.4e-183 645.6 721 53.8
A04p13760 Brassica napus HOM05D003681 ORTHO05D004703 4.4e-183 645.6 739 52.4
CAN.G1057.25 Capsicum annuum HOM05D003681 ORTHO05D004703 1.7e-182 643.7 719 54.1
FvH4_6g52640 Fragaria vesca HOM05D003681 ORTHO05D004703 2.2e-182 643.3 727 53.2
vmacro05923 Vaccinium macrocarpon HOM05D003681 ORTHO05D004703 2.2e-182 643.3 733 52.9
C04p47540 Brassica napus HOM05D003681 ORTHO05D004703 3.7e-182 642.5 731 52.3
CSS0007013 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 4.1e-181 639.0 706 53.7
AUR62036017 Chenopodium quinoa HOM05D003681 ORTHO05D004703 7.0e-181 638.3 706 54.2
BcaC08g44481 Brassica carinata HOM05D003681 ORTHO05D004703 1.6e-180 637.1 737 52.2
BolC4t26356H Brassica oleracea HOM05D003681 ORTHO05D004703 1.6e-180 637.1 729 52.0
ECA238G4183 Erigeron canadensis HOM05D003681 ORTHO05D004703 2.7e-180 636.3 695 54.2
SalBow1G2960 Salvia bowleyana HOM05D003681 ORTHO05D004703 2.7e-180 636.3 721 52.6
SalBow1G7977 Salvia bowleyana HOM05D003681 ORTHO05D004703 2.7e-180 636.3 721 52.6
BolC6t37131H Brassica oleracea HOM05D003681 ORTHO05D004703 4.5e-180 635.6 734 51.6
FAN14G5093 Fragaria x ananassa HOM05D003681 ORTHO05D004703 5.9e-180 635.2 745 52.2
Hma1.2p1_0279F.1_g112260 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 1.7e-179 633.6 767 52.4
C06p19360 Brassica napus HOM05D003681 ORTHO05D004703 2.9e-179 632.9 737 51.8
Psat1g082400 Pisum sativum HOM05D003681 ORTHO05D004703 6.6e-179 631.7 720 53.2
BcaB02g07929 Brassica carinata HOM05D003681 ORTHO05D004703 1.1e-178 630.9 734 51.4
BraA07t29742Z Brassica rapa HOM05D003681 ORTHO05D004703 1.1e-178 630.9 731 51.4
FAN02G4174 Fragaria x ananassa HOM05D003681 ORTHO05D004703 1.5e-178 630.6 727 53.1
FAN09G4630 Fragaria x ananassa HOM05D003681 ORTHO05D004703 1.5e-178 630.6 745 52.1
Solyc02g067990.3 Solanum lycopersicum HOM05D003681 ORTHO05D004703 2.5e-178 629.8 706 53.0
A07p20510 Brassica napus HOM05D003681 ORTHO05D004703 2.8e-177 626.3 734 51.4
BcaB06g27549 Brassica carinata HOM05D003681 ORTHO05D004703 6.1e-177 625.2 722 51.5
Medtr6g022730 Medicago truncatula HOM05D003681 ORTHO05D004703 5.2e-176 622.1 722 52.2
Lalb_Chr21g0317601 Lupinus albus HOM05D003681 ORTHO05D004703 6.8e-176 621.7 721 51.2
ATR0824G011 Amborella trichopoda HOM05D003681 ORTHO05D004703 1.2e-175 620.9 645 57.5
FAN05G4404 Fragaria x ananassa HOM05D003681 ORTHO05D004703 1.5e-175 620.5 772 50.5
Nitab4.5_0008718g0020 Nicotiana tabacum HOM05D003681 ORTHO05D004703 3.7e-174 615.9 724 51.7
Sabra16G0218400 Salix brachista HOM05D003681 ORTHO05D004703 4.9e-174 615.5 714 52.2
Rhsim10G0011100 Rhododendron simsii HOM05D003681 ORTHO05D004703 6.4e-174 615.1 736 51.9
Nitab4.5_0001863g0130 Nicotiana tabacum HOM05D003681 ORTHO05D004703 1.1e-173 614.4 721 51.5
Nitab4.5_0000040g0490 Nicotiana tabacum HOM05D003681 ORTHO05D004703 2.4e-173 613.2 724 51.5
Os02g0329300 Oryza sativa ssp. japonica HOM05D003681 ORTHO05D004703 3.2e-173 612.8 724 53.6
Ca_04403_v3 Cicer arietinum L. HOM05D003681 ORTHO05D004703 9.2e-173 611.3 615 56.6
Gohir.A10G160600 Gossypium hirsutum HOM05D003681 ORTHO05D004703 7.8e-172 608.2 547 60.1
Actinidia36165 Actinidia chinensis HOM05D003681 ORTHO05D004703 1.3e-171 607.4 710 51.7
Rhsim08G0046300 Rhododendron simsii HOM05D003681 ORTHO05D004703 2.3e-171 606.7 749 50.1
Oeu050433.3 Olea europaea HOM05D003681 ORTHO05D004703 3.0e-171 606.3 743 50.7
HPP92_006269 Vanilla planifolia HOM05D003681 ORTHO05D004703 3.0e-171 606.3 614 58.3
AUR62035509 Chenopodium quinoa HOM05D003681 ORTHO05D004703 6.6e-171 605.1 706 52.4
Zm00001eb235200 Zea mays HOM05D003681 ORTHO05D004703 1.9e-170 603.6 718 52.1
Lsat_1_v5_gn_2_93641 Lactuca sativa HOM05D003681 ORTHO05D004703 5.8e-167 592.0 722 50.7
Peaxi162Scf00080g01724 Petunia axillaris HOM05D003681 ORTHO05D004703 1.7e-166 590.5 724 50.4
SGA_v2.0_scaffold135G34941 Striga asiatica HOM05D003681 ORTHO05D004703 4.1e-165 585.9 744 50.0
Oeu058755.3 Olea europaea HOM05D003681 ORTHO05D004703 3.0e-163 579.7 764 48.6
Lj1g0019639 Lotus japonicus HOM05D003681 ORTHO05D004703 3.9e-163 579.3 731 49.5
Sc03g0007020 Simmondsia chinensis HOM05D003681 ORTHO05D004703 3.6e-161 572.8 713 48.8
TAR374G1355 Trochodendron aralioides HOM05D003681 ORTHO05D004703 1.1e-157 561.2 439 67.2
TPR.G36528 Trifolium pratense HOM05D003681 ORTHO05D004703 8.1e-153 545.0 787 46.3
unitig_21.g20482 Utricularia gibba HOM05D003681 ORTHO05D004703 2.1e-140 503.8 720 46.4
unitig_744.g24365 Utricularia gibba HOM05D003681 ORTHO05D004703 3.9e-139 499.6 593 52.6
DCAR_011289 Daucus carota HOM05D003681 ORTHO05D004703 1.2e-135 488.0 537 55.3
QL07p006188 Quercus lobata HOM05D003681 ORTHO05D004703 3.8e-118 429.9 373 63.0
Mapoly0032s0042 Marchantia polymorpha HOM05D003681 ORTHO05D004703 8.2e-105 385.6 642 41.1
SMO367G0854 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 5.0e-102 376.3 622 40.5
Pp3c13_14720 Physcomitrium patens HOM05D003681 ORTHO05D004703 1.9e-101 374.4 625 40.8
Pp3c13_14730 Physcomitrium patens HOM05D003681 ORTHO05D004703 1.9e-101 374.4 625 40.8
Pp3c4_18170 Physcomitrium patens HOM05D003681 ORTHO05D004703 2.3e-99 367.5 625 40.0
Pp3c3_25790 Physcomitrium patens HOM05D003681 ORTHO05D004703 7.0e-96 355.9 477 44.4
SHI03860 Sapria himalayana HOM05D003681 ORTHO05D004703 3.5e-95 353.6 436 50.7
QL09p045970 Quercus lobata HOM05D003681 ORTHO05D004703 2.2e-86 324.3 304 60.5
SEGI_13919 Sequoiadendron giganteum HOM05D003681 ORTHO05D004703 5.4e-80 303.1 366 48.9
Actinidia35791 Actinidia chinensis HOM05D003681 ORTHO05D004703 2.1e-76 291.2 257 63.0
MELO3C014854.2 Cucumis melo HOM05D003681 ORTHO05D004703 4.1e-72 276.9 418 44.0
CBR_g66670 Chara braunii HOM05D003681 ORTHO05D004703 5.9e-71 273.1 565 33.8
RcHm_v2.0_Chr2g0109021 Rosa chinensis HOM05D002608 ORTHO05D004703 3.2e-64 250.8 269 51.7
MBI06_g35146_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D004703 7.8e-63 246.1 333 46.5
AagrBONN_evm.TU.Sc2ySwM_228.437 Anthoceros agrestis HOM05D003681 ORTHO05D004703 6.4e-57 226.5 353 41.9
SGA_v2.0_scaffold135G34947 Striga asiatica HOM05D003681 ORTHO05D004703 1.2e-55 222.2 274 48.5
Nn3g16565 Nelumbo nucifera HOM05D003681 ORTHO05D004703 3.5e-55 220.7 183 66.1
RcHm_v2.0_Chr5g0047251 Rosa chinensis HOM05D002608 ORTHO05D021346 7.1e-48 196.4 416 35.6
SMO367G0212 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 1.7e-41 175.3 582 31.3
TAR629G3339 Trochodendron aralioides HOM05D003681 ORTHO05D030546 3.2e-40 171.0 404 30.9
Lsat_1_v5_gn_3_79520 Lactuca sativa HOM05D003681 ORTHO05D004703 7.1e-40 169.9 274 42.7
SMO367G0417 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 1.3e-30 139.0 600 29.5
RcHm_v2.0_Chr6g0248701 Rosa chinensis HOM05D002608 ORTHO05D013040 2.3e-30 138.3 102 63.7
RcHm_v2.0_Chr5g0045391 Rosa chinensis HOM05D003681 ORTHO05D004703 3.4e-26 124.4 96 61.5
RcHm_v2.0_Chr2g0096321 Rosa chinensis HOM05D003681 ORTHO05D004703 1.3e-25 122.5 96 60.4
SMO275G0043 Selaginella moellendorffii HOM05D003681 ORTHO05D030546 1.9e-24 118.6 104 62.5
BcaC05g26953 Brassica carinata HOM05D003681 ORTHO05D024003 4.2e-24 117.5 70 74.3
C05p28020 Brassica napus HOM05D003681 ORTHO05D024003 4.2e-24 117.5 70 74.3
BolC5t31529H Brassica oleracea HOM05D003681 ORTHO05D024003 6.6e-22 110.2 70 72.9
RcHm_v2.0_Chr6g0248711 Rosa chinensis HOM05D003681 ORTHO05D030546 2.4e-19 101.7 51 90.2
SEGI_03694 Sequoiadendron giganteum HOM05D003681 ORTHO05D024003 3.2e-16 91.3 60 71.7
MBI02_g11376_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D024003 7.1e-16 90.1 60 68.3
Hma1.2p1_0026F.1_g016370 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 2.9e-09 68.2 194 31.4
SHI03859 Sapria himalayana HOM05D000105 ORTHO05D000023 1.6e-07 62.4 293 28.0
SMO367G0834 Selaginella moellendorffii HOM05D003681 ORTHO05D030546 1.3e-06 59.3 86 44.2


User provided reference genes

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