Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2564 Ceratophyllum demersum HOM05D005605 ORTHO05D007615 9.3e-158 560.5 280 100.0
TAR628G1411 Trochodendron aralioides HOM05D005605 ORTHO05D007615 4.4e-59 232.6 257 50.6
PSO541G1874 Papaver somniferum HOM05D005605 ORTHO05D007615 3.8e-58 229.6 245 51.8
MBI02_g03744_MAGBIO Magnolia biondii HOM05D005605 ORTHO05D007615 1.4e-57 227.6 252 52.0
PSO675G3023 Papaver somniferum HOM05D005605 ORTHO05D007615 7.1e-57 225.3 273 48.0
ClCG02G005000 Citrullus lanatus HOM05D005605 ORTHO05D007615 3.9e-55 219.5 248 50.4
Aqoxy6G01115 Aquilegia oxysepala HOM05D005605 ORTHO05D007615 6.6e-55 218.8 200 57.5
MELO3C012521.2 Cucumis melo HOM05D005605 ORTHO05D007615 4.8e-53 212.6 248 50.8
CiPaw.05G064700 Carya illinoinensis HOM05D005605 ORTHO05D007615 8.1e-53 211.8 260 48.1
Sed0006971 Sechium edule HOM05D005605 ORTHO05D007615 1.4e-52 211.1 267 47.2
CsaV3_7G023590 Cucumis sativus L. HOM05D005605 ORTHO05D007615 4.0e-52 209.5 248 50.4
CAN.G1412.8 Capsicum annuum HOM05D005605 ORTHO05D007615 6.9e-52 208.8 248 46.8
SGA_v2.0_scaffold58G20533 Striga asiatica HOM05D005605 ORTHO05D007615 2.0e-51 207.2 239 49.4
Oeu015995.1 Olea europaea HOM05D005605 ORTHO05D007615 2.6e-51 206.8 242 47.1
PGSC0003DMG400000727 Solanum tuberosum HOM05D005605 ORTHO05D007615 4.5e-51 206.1 257 45.5
Solyc01g109630.4 Solanum lycopersicum HOM05D005605 ORTHO05D007615 7.6e-51 205.3 257 45.1
Haze_02388 Corylus avellana HOM05D005605 ORTHO05D007615 9.9e-51 204.9 296 44.9
Sopen01g051820 Solanum pennellii HOM05D005605 ORTHO05D007615 2.9e-50 203.4 257 44.0
Cpa.g.sc62.154 Carica papaya HOM05D005605 ORTHO05D007615 3.8e-50 203.0 253 48.2
Migut.B00234 Erythranthe guttata HOM05D005605 ORTHO05D007615 6.4e-50 202.2 253 46.2
CANSAT01G2366 Cannabis sativa HOM05D005605 ORTHO05D007615 1.1e-49 201.4 265 46.0
GSVIVG01031970001 Vitis vinifera HOM05D005605 ORTHO05D007615 1.4e-49 201.1 148 66.2
MSTRG.20083 Avicennia marina HOM05D005605 ORTHO05D007615 1.9e-49 200.7 252 46.0
Manes.17G101300 Manihot esculenta HOM05D005605 ORTHO05D007615 1.9e-49 200.7 253 46.6
Nn5g29612 Nelumbo nucifera HOM05D005605 ORTHO05D007615 3.2e-49 199.9 194 55.7
Phvul.011G045100 Phaseolus vulgaris HOM05D005605 ORTHO05D007615 2.1e-48 197.2 275 42.5
CSS0010527 Camellia sinensis var. sinensis HOM05D005605 ORTHO05D007615 2.7e-48 196.8 251 45.8
CSS0044100 Camellia sinensis var. sinensis HOM05D005605 ORTHO05D007615 2.7e-48 196.8 251 45.8
Hund00267 Selenicereus undatus HOM05D005605 ORTHO05D007615 6.0e-48 195.7 251 46.6
unitig_0.g65 Utricularia gibba HOM05D005605 ORTHO05D007615 7.9e-48 195.3 244 46.3
FvH4_2g08810 Fragaria vesca HOM05D005605 ORTHO05D007615 1.3e-47 194.5 238 47.9
Medtr4g070060 Medicago truncatula HOM05D005605 ORTHO05D007615 1.8e-47 194.1 248 45.2
QL11p043893 Quercus lobata HOM05D005605 ORTHO05D007615 2.3e-47 193.7 290 42.1
Gohir.D13G032600 Gossypium hirsutum HOM05D005605 ORTHO05D007615 3.0e-47 193.4 213 48.8
Gorai.013G037000 Gossypium raimondii HOM05D005605 ORTHO05D007615 3.0e-47 193.4 213 48.8
MD05G1066000 Malus domestica HOM05D005605 ORTHO05D007615 3.9e-47 193.0 235 48.5
TWI31G1015 Tripterygium wilfordii HOM05D005605 ORTHO05D007615 3.9e-47 193.0 286 42.0
Ca_20877_v3 Cicer arietinum L. HOM05D005605 ORTHO05D007615 5.1e-47 192.6 273 43.6
Eucgr.I01271 Eucalyptus grandis HOM05D005605 ORTHO05D007615 6.7e-47 192.2 260 43.5
Ah.01g006280 Amaranthus hybridus HOM05D005605 ORTHO05D007615 8.7e-47 191.8 246 42.3
FAN24G2665 Fragaria x ananassa HOM05D005605 ORTHO05D007615 1.1e-46 191.4 238 47.5
Gohir.A13G034200 Gossypium hirsutum HOM05D005605 ORTHO05D007615 1.1e-46 191.4 297 41.8
FAN15G0883 Fragaria x ananassa HOM05D005605 ORTHO05D007615 1.5e-46 191.0 237 47.7
FAN20G2643 Fragaria x ananassa HOM05D005605 ORTHO05D007615 1.9e-46 190.7 236 46.6
Prupe.8G096600 Prunus persica HOM05D005605 ORTHO05D007615 1.9e-46 190.7 235 48.1
RcHm_v2.0_Chr6g0264281 Rosa chinensis HOM05D005605 ORTHO05D007615 4.3e-46 189.5 240 47.1
EL10Ac9g21723 Beta vulgaris HOM05D005605 ORTHO05D007615 5.6e-46 189.1 240 46.7
CSS0037419 Camellia sinensis var. sinensis HOM05D005605 ORTHO05D007615 7.4e-46 188.7 225 48.4
CSS0012215 Camellia sinensis var. sinensis HOM05D005605 ORTHO05D007615 1.6e-45 187.6 225 48.0
Glyma.12G043100 Glycine max HOM05D005605 ORTHO05D007615 1.6e-45 187.6 275 41.8
Peaxi162Scf00016g00735 Petunia axillaris HOM05D005605 ORTHO05D007615 1.6e-45 187.6 204 51.5
Glyma.11G117700 Glycine max HOM05D005605 ORTHO05D007615 2.1e-45 187.2 255 41.2
Psat7g141400 Pisum sativum HOM05D005605 ORTHO05D007615 2.1e-45 187.2 263 43.3
Hma1.2p1_0066F.1_g036390 Hydrangea macrophylla HOM05D005605 ORTHO05D007615 3.7e-45 186.4 205 51.7
Duzib052G1004 Durio zibethinus HOM05D005605 ORTHO05D007615 1.4e-44 184.5 254 42.9
Potri.009G116200 Populus trichocarpa HOM05D005605 ORTHO05D007615 1.8e-44 184.1 257 44.7
arahy.Tifrunner.gnm1.ann1.XL89DC Arachis hypogaea HOM05D005605 ORTHO05D007615 4.0e-44 183.0 259 43.2
Lsat_1_v5_gn_1_111380 Lactuca sativa HOM05D005605 ORTHO05D007615 5.3e-44 182.6 254 44.5
TPR.G19396 Trifolium pratense HOM05D005605 ORTHO05D007615 2.0e-43 180.6 249 43.4
Cfa005000 Carpinus fangiana HOM05D005605 ORTHO05D007615 2.6e-43 180.3 146 61.0
Atru.chr5.3019 Acer truncatum HOM05D005605 ORTHO05D007615 3.4e-43 179.9 196 48.5
Sp4g00860 Schrenkiella parvula HOM05D005605 ORTHO05D007615 3.4e-43 179.9 257 41.2
Cc02_g17560 Coffea canephora HOM05D005605 ORTHO05D007615 5.8e-43 179.1 148 59.5
Thhalv10000085m.g Eutrema salsugineum HOM05D005605 ORTHO05D007615 7.6e-43 178.7 253 41.9
Sabra09G0089200 Salix brachista HOM05D005605 ORTHO05D007615 7.6e-43 178.7 257 42.8
Carub.0004s0075 Capsella rubella HOM05D005605 ORTHO05D007615 1.0e-42 178.3 259 40.9
Lj3g0011747 Lotus japonicus HOM05D005605 ORTHO05D007615 1.0e-42 178.3 285 39.3
Actinidia00525 Actinidia chinensis HOM05D005605 ORTHO05D007615 1.3e-42 177.9 148 58.8
AL4G10940 Arabidopsis lyrata HOM05D005605 ORTHO05D007615 1.7e-42 177.6 259 40.9
Thecc.02G085000 Theobroma cacao HOM05D005605 ORTHO05D007615 1.7e-42 177.6 295 39.0
BraA09t41190Z Brassica rapa HOM05D005605 ORTHO05D007615 2.9e-42 176.8 261 40.6
Cfa004997 Carpinus fangiana HOM05D005605 ORTHO05D007615 3.8e-42 176.4 247 44.9
HanXRQChr11g0343841 Helianthus annuus HOM05D005605 ORTHO05D007615 3.8e-42 176.4 250 42.8
VMungo1127G2130 Vigna mungo HOM05D005605 ORTHO05D007615 4.9e-42 176.0 258 39.5
Aa31LG7G14820 Aethionema arabicum HOM05D005605 ORTHO05D007615 6.5e-42 175.6 256 40.2
Cfa004998 Carpinus fangiana HOM05D005605 ORTHO05D007615 8.4e-42 175.3 146 59.6
A09p58000 Brassica napus HOM05D005605 ORTHO05D007615 2.5e-41 173.7 261 39.8
Ciclev10028120m.g Citrus clementina HOM05D005605 ORTHO05D007615 2.5e-41 173.7 181 50.8
DCAR_001580 Daucus carota HOM05D005605 ORTHO05D007615 3.2e-41 173.3 246 41.1
Lj5C196G6 Lonicera japonica HOM05D005605 ORTHO05D007615 3.2e-41 173.3 208 43.8
ATR0772G053 Amborella trichopoda HOM05D005605 ORTHO05D007615 7.1e-41 172.2 252 41.3
PGR142G2567 Punica granatum HOM05D005605 ORTHO05D007615 7.1e-41 172.2 226 43.8
AT2G21710 Arabidopsis thaliana HOM05D005605 ORTHO05D007615 9.3e-41 171.8 287 38.0
THA.LOC104824826 Tarenaya hassleriana HOM05D005605 ORTHO05D007615 9.3e-41 171.8 247 40.1
BcaB08g35002 Brassica carinata HOM05D005605 ORTHO05D007615 1.2e-40 171.4 260 39.2
BcaC07g41121 Brassica carinata HOM05D005605 ORTHO05D007615 1.2e-40 171.4 257 41.6
BolC8t51688H Brassica oleracea HOM05D005605 ORTHO05D007615 1.2e-40 171.4 257 41.6
Lalb_Chr03g0025671 Lupinus albus HOM05D005605 ORTHO05D007615 1.6e-40 171.0 211 43.6
COL.COLO4_25933 Corchorus olitorius HOM05D005605 ORTHO05D007615 1.3e-39 167.9 146 54.1
C08p41210 Brassica napus HOM05D005605 ORTHO05D007615 3.9e-39 166.4 260 40.4
Haze_02444 Corylus avellana HOM05D005605 ORTHO05D007615 1.9e-38 164.1 226 44.2
ECA248G2826 Erigeron canadensis HOM05D005605 ORTHO05D007615 1.9e-38 164.1 179 49.7
arahy.Tifrunner.gnm1.ann1.IZ1QNN Arachis hypogaea HOM05D005605 ORTHO05D007615 4.3e-38 162.9 266 39.8
Rhsim11G0177400 Rhododendron simsii HOM05D005605 ORTHO05D007615 8.2e-37 158.7 258 40.3
AUR62011322 Chenopodium quinoa HOM05D005605 ORTHO05D007615 1.4e-36 157.9 147 51.0
Haze_02391 Corylus avellana HOM05D005605 ORTHO05D007615 1.4e-36 157.9 125 60.0
HPP92_026666 Vanilla planifolia HOM05D005605 ORTHO05D007615 1.4e-36 157.9 232 40.5
Sc18g0004450 Simmondsia chinensis HOM05D005605 ORTHO05D007615 1.2e-35 154.8 275 37.1
Dinv23519 Davidia involucrata HOM05D005605 ORTHO05D007615 1.0e-34 151.8 219 44.3
Nitab4.5_0004172g0020 Nicotiana tabacum HOM05D005605 ORTHO05D007615 1.7e-34 151.0 253 39.1
Zm00001eb299540 Zea mays HOM05D005605 ORTHO05D007615 1.7e-34 151.0 177 44.1
SEGI_23691 Sequoiadendron giganteum HOM05D005605 ORTHO05D007615 6.5e-34 149.1 222 40.5
Os07g0134700 Oryza sativa ssp. japonica HOM05D005605 ORTHO05D007615 1.9e-33 147.5 169 45.6
AUR62016738 Chenopodium quinoa HOM05D005605 ORTHO05D007615 3.2e-33 146.7 114 57.9
AagrBONN_evm.TU.Sc2ySwM_228.1452 Anthoceros agrestis HOM05D005605 ORTHO05D007615 9.0e-28 128.6 151 39.7
Nitab4.5_0000308g0140 Nicotiana tabacum HOM05D005605 ORTHO05D007615 1.2e-27 128.3 288 31.9
Rhsim07G0028500 Rhododendron simsii HOM05D005605 ORTHO05D007615 6.1e-24 115.9 234 36.3
vmacro02103 Vaccinium macrocarpon HOM05D005605 ORTHO05D007615 6.1e-24 115.9 314 33.1
Mapoly0073s0074 Marchantia polymorpha HOM05D005605 ORTHO05D007615 2.0e-22 110.9 140 39.3
Pp3c3_15310 Physcomitrium patens HOM05D005605 ORTHO05D007615 3.7e-21 106.7 152 34.2
Haze_02436 Corylus avellana HOM05D005605 ORTHO05D007615 2.4e-20 104.0 151 41.1
SMO358G0083 Selaginella moellendorffii HOM05D005605 ORTHO05D007615 5.9e-19 99.4 127 38.6
MBI02_g24399_MAGBIO Magnolia biondii HOM05D005605 ORTHO05D007615 1.8e-12 77.8 67 55.2
Dinv07689 Davidia involucrata HOM05D005605 ORTHO05D007615 7.0e-12 75.9 88 48.9
SalBow6G1488 Salvia bowleyana HOM05D002700 ORTHO05D003228 5.9e-11 72.8 63 55.6
CARHR112700 Cardamine hirsuta HOM05D005605 ORTHO05D007615 1.1e-09 68.6 73 41.1
Haze_02447 Corylus avellana HOM05D005605 ORTHO05D007615 5.7e-06 56.2 124 36.3


User provided reference genes

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