Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2552 Ceratophyllum demersum HOM05D000290 ORTHO05D007356 4.3e-30 134.0 70 100.0
CDE04G2561 Ceratophyllum demersum HOM05D000290 ORTHO05D007356 1.7e-21 105.5 68 89.7
Lsat_1_v5_gn_2_126721 Lactuca sativa HOM05D000290 ORTHO05D007356 1.4e-20 102.4 61 83.6
Lj8A52T21 Lonicera japonica HOM05D000290 ORTHO05D007356 1.8e-20 102.1 61 83.6
ECA238G2935 Erigeron canadensis HOM05D000290 ORTHO05D007356 3.1e-20 101.3 58 86.2
HanXRQChr14g0460511 Helianthus annuus HOM05D000290 ORTHO05D007356 3.1e-20 101.3 61 82.0
CSS0016279 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007356 4.1e-20 100.9 61 82.0
CSS0037983 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007356 4.1e-20 100.9 61 82.0
Hma1.2p1_1805F.1_g303120 Hydrangea macrophylla HOM05D000290 ORTHO05D007356 6.9e-20 100.1 61 80.3
Rhsim03G0153700 Rhododendron simsii HOM05D000290 ORTHO05D007356 6.9e-20 100.1 61 82.0
TWI09G1541 Tripterygium wilfordii HOM05D000290 ORTHO05D007356 6.9e-20 100.1 58 86.2
Dinv34498 Davidia involucrata HOM05D000290 ORTHO05D007356 9.1e-20 99.8 61 80.3
MD07G1235400 Malus domestica HOM05D000290 ORTHO05D007356 9.1e-20 99.8 61 80.3
PSO017G3158 Papaver somniferum HOM05D000290 ORTHO05D007356 9.1e-20 99.8 63 77.8
PSO170G6016 Papaver somniferum HOM05D000290 ORTHO05D007356 9.1e-20 99.8 61 80.3
vmacro06903 Vaccinium macrocarpon HOM05D000290 ORTHO05D007356 1.5e-19 99.0 61 80.3
Aqoxy4G03280 Aquilegia oxysepala HOM05D000290 ORTHO05D007356 2.0e-19 98.6 58 84.5
TAR623G1031 Trochodendron aralioides HOM05D000290 ORTHO05D007356 2.0e-19 98.6 66 75.8
CANSAT56G2455 Cannabis sativa HOM05D000290 ORTHO05D007356 2.6e-19 98.2 58 82.8
Migut.F01231 Erythranthe guttata HOM05D000290 ORTHO05D007356 2.6e-19 98.2 57 84.2
Cpa.g.sc19.40 Carica papaya HOM05D000290 ORTHO05D007356 3.4e-19 97.8 58 84.5
Nn2g10265 Nelumbo nucifera HOM05D000290 ORTHO05D007356 3.4e-19 97.8 57 84.2
PGR142G4431 Punica granatum HOM05D000290 ORTHO05D007356 4.5e-19 97.4 56 85.7
Thecc.10G185100 Theobroma cacao HOM05D000290 ORTHO05D007356 4.5e-19 97.4 58 82.8
ATR1127G020 Amborella trichopoda HOM05D000290 ORTHO05D007356 5.9e-19 97.1 55 85.5
AL6G15040 Arabidopsis lyrata HOM05D000290 ORTHO05D007356 5.9e-19 97.1 63 76.2
AT5G05200 Arabidopsis thaliana HOM05D000290 ORTHO05D007356 5.9e-19 97.1 58 81.0
Cfa001193 Carpinus fangiana HOM05D000290 ORTHO05D007356 5.9e-19 97.1 57 84.2
CiPaw.01G307500 Carya illinoinensis HOM05D000290 ORTHO05D007356 5.9e-19 97.1 57 84.2
Haze_17371 Corylus avellana HOM05D000290 ORTHO05D007356 5.9e-19 97.1 57 84.2
FvH4_7g26150 Fragaria vesca HOM05D000290 ORTHO05D007356 5.9e-19 97.1 58 81.0
FAN01G0461 Fragaria x ananassa HOM05D000290 ORTHO05D007356 5.9e-19 97.1 58 81.0
FAN06G0462 Fragaria x ananassa HOM05D000290 ORTHO05D007356 5.9e-19 97.1 58 81.0
Gohir.A05G404300 Gossypium hirsutum HOM05D000290 ORTHO05D007356 5.9e-19 97.1 58 82.8
Manes.07G142100 Manihot esculenta HOM05D000290 ORTHO05D007356 5.9e-19 97.1 58 81.0
Potri.019G061300 Populus trichocarpa HOM05D000290 ORTHO05D007356 5.9e-19 97.1 61 77.0
GSVIVG01032656001 Vitis vinifera HOM05D000290 ORTHO05D007356 5.9e-19 97.1 55 87.3
Atru.chr12.193 Acer truncatum HOM05D000290 ORTHO05D007356 7.7e-19 96.7 58 79.3
Aa31LG11G6040 Aethionema arabicum HOM05D000290 ORTHO05D007356 7.7e-19 96.7 58 81.0
Duzib114G0405 Durio zibethinus HOM05D000290 ORTHO05D007356 7.7e-19 96.7 58 81.0
Gohir.D04G011400 Gossypium hirsutum HOM05D000290 ORTHO05D007356 7.7e-19 96.7 58 81.0
Gorai.012G013600 Gossypium raimondii HOM05D000290 ORTHO05D007356 7.7e-19 96.7 58 81.0
Psat2g061840 Pisum sativum HOM05D000290 ORTHO05D007356 7.7e-19 96.7 58 81.0
RcHm_v2.0_Chr1g0372581 Rosa chinensis HOM05D000290 ORTHO05D007356 7.7e-19 96.7 58 81.0
TPR.G33928 Trifolium pratense HOM05D000290 ORTHO05D007356 7.7e-19 96.7 58 81.0
Ca_23242_v3 Cicer arietinum L. HOM05D000290 ORTHO05D007356 1.0e-18 96.3 58 79.3
ClCG07G005270 Citrullus lanatus HOM05D000290 ORTHO05D007356 1.0e-18 96.3 61 77.0
COL.COLO4_19476 Corchorus olitorius HOM05D000290 ORTHO05D007356 1.0e-18 96.3 57 82.5
Thhalv10013198m.g Eutrema salsugineum HOM05D000290 ORTHO05D007356 1.0e-18 96.3 63 74.6
Prupe.2G265700 Prunus persica HOM05D000290 ORTHO05D007356 1.0e-18 96.3 58 79.3
QL08p065093 Quercus lobata HOM05D000290 ORTHO05D007356 1.0e-18 96.3 57 82.5
Glyma.14G186700 Glycine max HOM05D000290 ORTHO05D007356 1.3e-18 95.9 57 82.5
SalBow2G1855 Salvia bowleyana HOM05D000290 ORTHO05D007356 1.3e-18 95.9 58 81.0
BcaC06g32229 Brassica carinata HOM05D000290 ORTHO05D007356 1.7e-18 95.5 63 73.0
A10p30990 Brassica napus HOM05D000290 ORTHO05D007356 1.7e-18 95.5 63 73.0
C09p71500 Brassica napus HOM05D000290 ORTHO05D007356 1.7e-18 95.5 63 73.0
BolC9t59913H Brassica oleracea HOM05D000290 ORTHO05D007356 1.7e-18 95.5 63 73.0
BraA10t45144Z Brassica rapa HOM05D000290 ORTHO05D007356 1.7e-18 95.5 63 73.0
Oeu039386.1 Olea europaea HOM05D000290 ORTHO05D007356 1.7e-18 95.5 57 82.5
SGA_v2.0_scaffold160G37737 Striga asiatica HOM05D000290 ORTHO05D007356 1.7e-18 95.5 58 81.0
unitig_90.g27551 Utricularia gibba HOM05D000290 ORTHO05D007356 1.7e-18 95.5 59 79.7
EL10Ac2g02669 Beta vulgaris HOM05D000290 ORTHO05D007356 2.2e-18 95.1 60 75.0
Eucgr.G03148 Eucalyptus grandis HOM05D000290 ORTHO05D007356 2.2e-18 95.1 58 79.3
Medtr5g068050 Medicago truncatula HOM05D000290 ORTHO05D007356 2.2e-18 95.1 58 79.3
Phvul.008G186400 Phaseolus vulgaris HOM05D000290 ORTHO05D007356 2.2e-18 95.1 57 80.7
Carub.0006s0413 Capsella rubella HOM05D000290 ORTHO05D007356 2.9e-18 94.7 63 74.6
LjContig00408g0018075 Lotus japonicus HOM05D000290 ORTHO05D007356 2.9e-18 94.7 57 80.7
Lalb_Chr10g0102831 Lupinus albus HOM05D000290 ORTHO05D007356 2.9e-18 94.7 55 83.6
THA.LOC104823168 Tarenaya hassleriana HOM05D000290 ORTHO05D007356 2.9e-18 94.7 55 83.6
Ah.12g064460 Amaranthus hybridus HOM05D000290 ORTHO05D007356 3.8e-18 94.4 58 77.6
arahy.Tifrunner.gnm1.ann1.FMIL5U Arachis hypogaea HOM05D000290 ORTHO05D007356 3.8e-18 94.4 55 83.6
arahy.Tifrunner.gnm1.ann1.S15XUX Arachis hypogaea HOM05D000290 ORTHO05D007356 3.8e-18 94.4 55 83.6
CARHR208040 Cardamine hirsuta HOM05D000290 ORTHO05D007356 3.8e-18 94.4 55 83.6
Sed0001960 Sechium edule HOM05D000290 ORTHO05D007356 3.8e-18 94.4 55 83.6
BcaB01g05943 Brassica carinata HOM05D000290 ORTHO05D007356 5.0e-18 94.0 63 73.0
A03p02240 Brassica napus HOM05D000290 ORTHO05D007356 5.0e-18 94.0 63 73.0
C03p02580 Brassica napus HOM05D000290 ORTHO05D007356 5.0e-18 94.0 63 73.0
BraA03t09588Z Brassica rapa HOM05D000290 ORTHO05D007356 5.0e-18 94.0 63 73.0
Sp6g37630 Schrenkiella parvula HOM05D000290 ORTHO05D007356 5.0e-18 94.0 55 81.8
AUR62024948 Chenopodium quinoa HOM05D000290 ORTHO05D007356 6.5e-18 93.6 58 74.1
AUR62030591 Chenopodium quinoa HOM05D000290 ORTHO05D007356 6.5e-18 93.6 58 74.1
Cc02_g05200 Coffea canephora HOM05D000290 ORTHO05D007356 6.5e-18 93.6 57 80.7
BcaB01g05718 Brassica carinata HOM05D000290 ORTHO05D007356 8.5e-18 93.2 63 71.4
MELO3C020171.2 Cucumis melo HOM05D000290 ORTHO05D007356 8.5e-18 93.2 55 81.8
CsaV3_5G011120 Cucumis sativus L. HOM05D000290 ORTHO05D007356 1.1e-17 92.8 55 81.8
PGSC0003DMG400022947 Solanum tuberosum HOM05D000290 ORTHO05D007356 1.9e-17 92.0 55 80.0
HPP92_017912 Vanilla planifolia HOM05D000290 ORTHO05D007356 1.9e-17 92.0 55 80.0
Ciclev10031187m.g Citrus clementina HOM05D000290 ORTHO05D007356 3.2e-17 91.3 55 78.2
Os07g0227800 Oryza sativa ssp. japonica HOM05D000290 ORTHO05D007356 4.2e-17 90.9 64 68.8
Sopen03g025570 Solanum pennellii HOM05D000290 ORTHO05D007356 9.4e-17 89.7 55 78.2
CAN.G1229.6 Capsicum annuum HOM05D000290 ORTHO05D007356 1.2e-16 89.4 55 76.4
SEGI_22277 Sequoiadendron giganteum HOM05D000290 ORTHO05D007356 1.6e-16 89.0 55 76.4
Nitab4.5_0005979g0040 Nicotiana tabacum HOM05D000290 ORTHO05D007356 2.1e-16 88.6 55 76.4
Nitab4.5_0000171g0290 Nicotiana tabacum HOM05D000290 ORTHO05D007356 2.7e-16 88.2 55 76.4
Peaxi162Scf00073g02224 Petunia axillaris HOM05D000290 ORTHO05D007356 2.7e-16 88.2 55 76.4
Solyc03g095620.4 Solanum lycopersicum HOM05D000290 ORTHO05D007356 2.7e-16 88.2 55 76.4
Hund13437 Selenicereus undatus HOM05D000290 ORTHO05D007356 3.6e-16 87.8 65 66.2
Sabra19G0075100 Salix brachista HOM05D000290 ORTHO05D007356 4.7e-16 87.4 52 78.8
Mapoly0021s0153 Marchantia polymorpha HOM05D000290 ORTHO05D007356 1.8e-15 85.5 58 69.0
SMO361G0050 Selaginella moellendorffii HOM05D000290 ORTHO05D007356 2.0e-14 82.0 51 76.5
Pp3c1_33470 Physcomitrium patens HOM05D000290 ORTHO05D007356 7.4e-14 80.1 49 77.6
AagrBONN_evm.TU.Sc2ySwM_344.3768 Anthoceros agrestis HOM05D000290 ORTHO05D007356 2.2e-13 78.6 63 60.3
CBR_g39925 Chara braunii HOM05D000290 ORTHO05D007356 3.7e-13 77.8 54 64.8
QL93p0107_0129 Quercus lobata HOM05D000290 ORTHO05D007356 1.3e-10 69.3 50 72.0
Cre09.g407801 Chlamydomonas reinhardtii HOM05D000290 ORTHO05D007356 1.7e-10 68.9 49 63.3
PRCOL_00000290 Prasinoderma coloniale HOM05D000290 ORTHO05D007356 1.7e-10 68.9 49 61.2
Duzib128G1704 Durio zibethinus HOM05D000290 ORTHO05D007356 2.0e-06 55.5 28 96.4


User provided reference genes

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