Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2455 Ceratophyllum demersum HOM05D005807 ORTHO05D007121 2.5e-46 188.3 90 100.0
CDE06G1924 Ceratophyllum demersum HOM05D005807 ORTHO05D007121 1.8e-28 129.0 89 76.4
CDE06G1535 Ceratophyllum demersum HOM05D005807 ORTHO05D007121 5.2e-28 127.5 89 75.3
MBI14_g11284_MAGBIO Magnolia biondii HOM05D005807 ORTHO05D007121 6.4e-26 120.6 88 69.3
Hma1.2p1_0703F.1_g206510 Hydrangea macrophylla HOM05D005807 ORTHO05D007121 1.1e-25 119.8 89 68.5
HPP92_000412 Vanilla planifolia HOM05D005807 ORTHO05D007121 2.4e-25 118.6 89 69.7
COL.COLO4_19156 Corchorus olitorius HOM05D005807 ORTHO05D007121 7.1e-25 117.1 131 50.4
arahy.Tifrunner.gnm1.ann1.8F6K17 Arachis hypogaea HOM05D005807 ORTHO05D007121 9.2e-25 116.7 88 67.0
arahy.Tifrunner.gnm1.ann1.B02C3Y Arachis hypogaea HOM05D005807 ORTHO05D007121 9.2e-25 116.7 88 67.0
Duzib150G0199 Durio zibethinus HOM05D005807 ORTHO05D007121 1.2e-24 116.3 88 68.2
Duzib168G1045 Durio zibethinus HOM05D005807 ORTHO05D007121 1.2e-24 116.3 88 68.2
Actinidia29698 Actinidia chinensis HOM05D005807 ORTHO05D007121 2.1e-24 115.5 89 65.2
Cpa.g.sc62.98 Carica papaya HOM05D005807 ORTHO05D007121 2.1e-24 115.5 92 64.1
Os01g0668000 Oryza sativa ssp. japonica HOM05D005807 ORTHO05D007121 2.1e-24 115.5 88 68.2
GSVIVG01038735001 Vitis vinifera HOM05D005807 ORTHO05D007121 2.1e-24 115.5 88 67.0
Sabra09G0033100 Salix brachista HOM05D005807 ORTHO05D007121 2.7e-24 115.2 120 51.7
VMungo0540G1230 Vigna mungo HOM05D005807 ORTHO05D007121 2.7e-24 115.2 88 67.0
Glyma.18G063100 Glycine max HOM05D005807 ORTHO05D007121 3.5e-24 114.8 89 65.2
Actinidia13933 Actinidia chinensis HOM05D005807 ORTHO05D007121 4.6e-24 114.4 89 65.2
Migut.N02895 Erythranthe guttata HOM05D005807 ORTHO05D007121 4.6e-24 114.4 88 67.0
HanXRQChr08g0221811 Helianthus annuus HOM05D005807 ORTHO05D007121 4.6e-24 114.4 89 65.2
Phvul.006G068000 Phaseolus vulgaris HOM05D005807 ORTHO05D007121 4.6e-24 114.4 88 65.9
PGR102G0477 Punica granatum HOM05D005807 ORTHO05D007121 4.6e-24 114.4 87 63.2
Zm00001eb110600 Zea mays HOM05D005807 ORTHO05D007121 6.0e-24 114.0 88 68.2
AT5G58740 Arabidopsis thaliana HOM05D005807 ORTHO05D007121 7.8e-24 113.6 89 65.2
Gohir.A13G224500 Gossypium hirsutum HOM05D005807 ORTHO05D007121 7.8e-24 113.6 89 65.2
Gorai.013G260200 Gossypium raimondii HOM05D005807 ORTHO05D007121 7.8e-24 113.6 89 65.2
Thecc.09G301900 Theobroma cacao HOM05D005807 ORTHO05D007121 1.0e-23 113.2 88 65.9
HanXRQChr07g0202931 Helianthus annuus HOM05D005807 ORTHO05D007121 1.3e-23 112.8 89 65.2
Lsat_1_v5_gn_2_122940 Lactuca sativa HOM05D005807 ORTHO05D007121 1.3e-23 112.8 88 65.9
THA.LOC104810714 Tarenaya hassleriana HOM05D005807 ORTHO05D007121 1.3e-23 112.8 88 67.0
THA.LOC104811269 Tarenaya hassleriana HOM05D005807 ORTHO05D007121 1.3e-23 112.8 88 67.0
vmacro10049 Vaccinium macrocarpon HOM05D005807 ORTHO05D007121 1.3e-23 112.8 89 64.0
Ah.15g099940 Amaranthus hybridus HOM05D005807 ORTHO05D007121 1.7e-23 112.5 85 65.9
AL8G35020 Arabidopsis lyrata HOM05D005807 ORTHO05D007121 1.7e-23 112.5 89 64.0
CANSAT25G1325 Cannabis sativa HOM05D005807 ORTHO05D007121 1.7e-23 112.5 89 61.8
Carub.0008s1936 Capsella rubella HOM05D005807 ORTHO05D007121 1.7e-23 112.5 89 64.0
Thhalv10014898m.g Eutrema salsugineum HOM05D005807 ORTHO05D007121 1.7e-23 112.5 89 64.0
Glyma.11G175500 Glycine max HOM05D005807 ORTHO05D007121 1.7e-23 112.5 89 64.0
Nn2g13704 Nelumbo nucifera HOM05D005807 ORTHO05D007121 1.7e-23 112.5 88 65.9
Sp6g20430 Schrenkiella parvula HOM05D005807 ORTHO05D007121 1.7e-23 112.5 89 64.0
CSS0007250 Camellia sinensis var. sinensis HOM05D005807 ORTHO05D007121 2.3e-23 112.1 88 63.6
Manes.02G119500 Manihot esculenta HOM05D005807 ORTHO05D007121 2.3e-23 112.1 90 62.2
Sc12g0000690 Simmondsia chinensis HOM05D005807 ORTHO05D007121 2.3e-23 112.1 84 66.7
TWI31G0235 Tripterygium wilfordii HOM05D005807 ORTHO05D007121 3.0e-23 111.7 84 67.9
TAR636G1782 Trochodendron aralioides HOM05D005807 ORTHO05D007121 3.0e-23 111.7 88 64.8
BcaB01g04495 Brassica carinata HOM05D005807 ORTHO05D007121 3.9e-23 111.3 89 62.9
Gohir.D13G229500 Gossypium hirsutum HOM05D005807 ORTHO05D007121 3.9e-23 111.3 89 64.0
Lalb_Chr18g0050921 Lupinus albus HOM05D005807 ORTHO05D007121 3.9e-23 111.3 88 63.6
Sed0012142 Sechium edule HOM05D005807 ORTHO05D007121 3.9e-23 111.3 88 63.6
Lj5g0019578 Lotus japonicus HOM05D005807 ORTHO05D007121 6.6e-23 110.5 89 61.8
Lj6g0006671 Lotus japonicus HOM05D005807 ORTHO05D007121 6.6e-23 110.5 89 61.8
Aa31LG11G500 Aethionema arabicum HOM05D005807 ORTHO05D007121 8.6e-23 110.2 89 62.9
EL10Ac7g16166 Beta vulgaris HOM05D005807 ORTHO05D007121 8.6e-23 110.2 85 65.9
BcaC04g19835 Brassica carinata HOM05D005807 ORTHO05D007121 8.6e-23 110.2 89 62.9
A10p15530 Brassica napus HOM05D005807 ORTHO05D007121 8.6e-23 110.2 89 62.9
C09p50820 Brassica napus HOM05D005807 ORTHO05D007121 8.6e-23 110.2 89 62.9
BolC9t57942H Brassica oleracea HOM05D005807 ORTHO05D007121 8.6e-23 110.2 89 62.9
BraA10t43680Z Brassica rapa HOM05D005807 ORTHO05D007121 8.6e-23 110.2 89 62.9
MELO3C020551.2 Cucumis melo HOM05D005807 ORTHO05D007121 8.6e-23 110.2 89 62.9
CsaV3_1G036170 Cucumis sativus L. HOM05D005807 ORTHO05D007121 8.6e-23 110.2 89 62.9
Psat5g159160 Pisum sativum HOM05D005807 ORTHO05D007121 8.6e-23 110.2 89 62.9
Prupe.6G057600 Prunus persica HOM05D005807 ORTHO05D007121 8.6e-23 110.2 89 61.8
TWI36G1710 Tripterygium wilfordii HOM05D005807 ORTHO05D007121 1.1e-22 109.8 86 66.3
MSTRG.22154 Avicennia marina HOM05D005807 ORTHO05D007121 1.5e-22 109.4 86 62.8
CARHR272650 Cardamine hirsuta HOM05D005807 ORTHO05D007121 1.5e-22 109.4 89 64.0
CiPaw.13G077700 Carya illinoinensis HOM05D005807 ORTHO05D007121 1.5e-22 109.4 90 61.1
MD11G1074800 Malus domestica HOM05D005807 ORTHO05D007121 1.5e-22 109.4 88 62.5
THA.LOC104814913 Tarenaya hassleriana HOM05D005807 ORTHO05D007121 1.5e-22 109.4 84 66.7
TAR633G0553 Trochodendron aralioides HOM05D005807 ORTHO05D007121 1.5e-22 109.4 89 62.9
Ciclev10029472m.g Citrus clementina HOM05D005807 ORTHO05D007121 1.9e-22 109.0 92 60.9
Eucgr.B02255 Eucalyptus grandis HOM05D005807 ORTHO05D007121 1.9e-22 109.0 90 60.0
FAN16G0682 Fragaria x ananassa HOM05D005807 ORTHO05D007121 1.9e-22 109.0 89 60.7
FAN21G1466 Fragaria x ananassa HOM05D005807 ORTHO05D007121 1.9e-22 109.0 89 60.7
RcHm_v2.0_Chr5g0069441 Rosa chinensis HOM05D005807 ORTHO05D007121 1.9e-22 109.0 89 60.7
CiPaw.14G059700 Carya illinoinensis HOM05D005807 ORTHO05D007121 2.5e-22 108.6 90 58.9
Manes.01G161700 Manihot esculenta HOM05D005807 ORTHO05D007121 2.5e-22 108.6 83 66.3
Ca_14930_v3 Cicer arietinum L. HOM05D005807 ORTHO05D007121 3.3e-22 108.2 80 66.2
Potri.001G251204 Populus trichocarpa HOM05D005807 ORTHO05D007121 3.3e-22 108.2 88 61.4
SalBow7G1665 Salvia bowleyana HOM05D005807 ORTHO05D007121 3.3e-22 108.2 86 62.8
ClCG03G000770 Citrullus lanatus HOM05D005807 ORTHO05D007121 4.3e-22 107.8 88 62.5
Cc05_g09980 Coffea canephora HOM05D005807 ORTHO05D007121 4.3e-22 107.8 88 62.5
Oeu025375.1 Olea europaea HOM05D005807 ORTHO05D007121 4.3e-22 107.8 86 62.8
SGA_v2.0_scaffold92G28310 Striga asiatica HOM05D005807 ORTHO05D007121 4.3e-22 107.8 86 64.0
MD03G1070800 Malus domestica HOM05D005807 ORTHO05D007121 5.6e-22 107.5 88 61.4
Aqoxy168s004 Aquilegia oxysepala HOM05D005807 ORTHO05D007121 9.5e-22 106.7 88 62.5
Aqoxy2G00908 Aquilegia oxysepala HOM05D005807 ORTHO05D007121 9.5e-22 106.7 88 62.5
Hma1.2p1_0703F.1_g206500 Hydrangea macrophylla HOM05D005807 ORTHO05D007121 9.5e-22 106.7 123 49.6
PSO339G6415 Papaver somniferum HOM05D005807 ORTHO05D007121 9.5e-22 106.7 89 61.8
PSO801G0778 Papaver somniferum HOM05D005807 ORTHO05D007121 9.5e-22 106.7 89 61.8
CAN.G394.126 Capsicum annuum HOM05D005807 ORTHO05D007121 1.2e-21 106.3 88 60.2
Sabra16G0152900 Salix brachista HOM05D005807 ORTHO05D007121 1.2e-21 106.3 86 61.6
Gohir.D09G090500 Gossypium hirsutum HOM05D005807 ORTHO05D007121 1.6e-21 105.9 77 68.8
Nitab4.5_0008156g0020 Nicotiana tabacum HOM05D005807 ORTHO05D007121 1.6e-21 105.9 88 60.2
Solyc06g076940.3 Solanum lycopersicum HOM05D005807 ORTHO05D007121 1.6e-21 105.9 86 60.5
Sopen06g033340 Solanum pennellii HOM05D005807 ORTHO05D007121 1.6e-21 105.9 86 60.5
unitig_8.g3606 Utricularia gibba HOM05D000298 ORTHO05D001646 1.6e-21 105.9 88 60.2
PGSC0003DMG400030355 Solanum tuberosum HOM05D005807 ORTHO05D007121 2.1e-21 105.5 86 60.5
FvH4_3g38540 Fragaria vesca HOM05D005807 ORTHO05D007121 3.6e-21 104.8 89 59.6
FAN11G3045 Fragaria x ananassa HOM05D005807 ORTHO05D007121 3.6e-21 104.8 89 59.6
Nitab4.5_0000010g0300 Nicotiana tabacum HOM05D005807 ORTHO05D007121 3.6e-21 104.8 86 60.5
Atru.chr3.4221 Acer truncatum HOM05D005807 ORTHO05D007121 8.1e-21 103.6 86 58.1
DCAR_013059 Daucus carota HOM05D000043 ORTHO05D000223 1.4e-20 102.8 86 59.3
Sed0002691 Sechium edule HOM05D005807 ORTHO05D007121 6.8e-20 100.5 74 64.9
SEGI_25973 Sequoiadendron giganteum HOM05D005807 ORTHO05D007121 1.2e-19 99.8 74 63.5
QL01p038261 Quercus lobata HOM05D005807 ORTHO05D007121 3.4e-19 98.2 117 46.2
SMO116G0032 Selaginella moellendorffii HOM05D005807 ORTHO05D007121 3.5e-16 88.2 85 50.6
RcHm_v2.0_Chr6g0251941 Rosa chinensis HOM05D005807 ORTHO05D007121 3.0e-15 85.1 80 52.5
Hund18849 Selenicereus undatus HOM05D005807 ORTHO05D007121 5.6e-14 80.9 68 63.2
ATR0618G394 Amborella trichopoda HOM05D005807 ORTHO05D007121 1.6e-13 79.3 58 69.0
Mapoly0037s0041 Marchantia polymorpha HOM05D005807 ORTHO05D007121 1.6e-13 79.3 84 47.6
Cfa011694 Carpinus fangiana HOM05D005807 ORTHO05D007121 6.2e-13 77.4 57 66.7
AUR62001647 Chenopodium quinoa HOM05D005807 ORTHO05D007121 1.4e-12 76.3 57 64.9
Dinv34391 Davidia involucrata HOM05D005807 ORTHO05D007121 2.4e-12 75.5 57 66.7
ECA238G3051 Erigeron canadensis HOM05D005807 ORTHO05D007121 2.4e-12 75.5 62 59.7
AUR62020129 Chenopodium quinoa HOM05D005807 ORTHO05D007121 4.0e-12 74.7 57 63.2
Peaxi162Scf00540g00427 Petunia axillaris HOM05D005807 ORTHO05D007121 4.0e-12 74.7 59 59.3
Haze_24321 Corylus avellana HOM05D005807 ORTHO05D007121 1.5e-11 72.8 46 71.7
TPR.G21179 Trifolium pratense HOM05D005807 ORTHO05D007121 2.0e-11 72.4 58 62.1
Medtr3g463620 Medicago truncatula HOM05D005807 ORTHO05D007121 3.4e-11 71.6 58 62.1
SHI19135 Sapria himalayana HOM05D005807 ORTHO05D007121 7.6e-11 70.5 53 66.0
Pp3c16_190 Physcomitrium patens HOM05D005807 ORTHO05D007121 6.4e-10 67.4 74 43.2
Gohir.A09G090400 Gossypium hirsutum HOM05D005807 ORTHO05D007121 8.4e-10 67.0 42 73.8
Nn2g11480 Nelumbo nucifera HOM05D005807 ORTHO05D007121 9.3e-09 63.5 49 67.3
Oeu010994.1 Olea europaea HOM05D005807 ORTHO05D007121 1.2e-08 63.2 47 57.4
DCAR_011808 Daucus carota HOM05D005807 ORTHO05D007121 1.6e-08 62.8 65 53.8
BcaB01g04639 Brassica carinata HOM05D005807 ORTHO05D007121 4.6e-08 61.2 48 62.5
Cre08.g369400 Chlamydomonas reinhardtii HOM05D005807 ORTHO05D007121 1.5e-06 56.2 70 41.4
MCO15G629 Micromonas commoda HOM05D005807 ORTHO05D007121 1.9e-06 55.8 73 39.7


User provided reference genes

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