Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 4.4e-59 231.1 119 100.0
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 1.7e-55 219.2 119 94.1
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 3.9e-39 164.9 118 68.6
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 4.9e-34 147.9 118 65.3
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 6.5e-34 147.5 119 64.7
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 1.4e-33 146.4 119 63.9
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 3.2e-33 145.2 119 63.0
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.2e-32 143.3 119 63.0
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 1.6e-32 142.9 121 61.2
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 2.1e-32 142.5 119 64.7
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 3.5e-32 141.7 116 61.2
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 3.5e-32 141.7 116 61.2
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 6.0e-32 141.0 115 66.1
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 7.9e-32 140.6 116 61.2
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 1.8e-31 139.4 116 62.1
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 2.3e-31 139.0 115 62.6
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 2.3e-31 139.0 122 63.9
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.3e-31 139.0 116 60.3
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 2.3e-31 139.0 116 66.4
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 3.0e-31 138.7 119 63.0
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 3.0e-31 138.7 118 63.6
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 3.9e-31 138.3 117 64.1
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 6.7e-31 137.5 116 62.1
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 8.7e-31 137.1 118 62.7
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 8.7e-31 137.1 120 60.0
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 1.5e-30 136.3 120 59.2
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 1.5e-30 136.3 116 59.5
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 2.5e-30 135.6 117 64.1
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 3.3e-30 135.2 122 59.8
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 5.7e-30 134.4 118 58.5
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 5.7e-30 134.4 119 63.0
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 7.4e-30 134.0 118 60.2
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 7.4e-30 134.0 123 63.4
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 9.6e-30 133.7 117 60.7
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 2.1e-29 132.5 118 60.2
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 2.1e-29 132.5 102 67.6
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 4.8e-29 131.3 119 59.7
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 4.8e-29 131.3 119 59.7
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 6.2e-29 131.0 121 58.7
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 8.2e-29 130.6 119 59.7
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 1.1e-28 130.2 119 59.7
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 1.8e-28 129.4 119 59.7
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 9.0e-28 127.1 118 58.5
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 1.5e-27 126.3 121 56.2
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.5e-27 126.3 117 59.0
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 2.6e-27 125.6 128 57.0
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 2.6e-27 125.6 119 56.3
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 4.5e-27 124.8 120 57.5
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 5.8e-27 124.4 120 56.7
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.3e-26 123.2 117 57.3
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 1.3e-26 123.2 120 56.7
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.3e-26 123.2 116 56.0
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 5.0e-26 121.3 122 58.2
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 5.0e-26 121.3 111 55.9
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 5.0e-26 121.3 120 57.5
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 5.0e-26 121.3 120 57.5
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 5.0e-26 121.3 119 57.1
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 1.1e-25 120.2 94 64.9
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 1.1e-25 120.2 121 58.7
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 1.1e-25 120.2 121 58.7
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 1.4e-25 119.8 115 53.9
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 1.9e-25 119.4 120 56.7
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 1.9e-25 119.4 117 57.3
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 1.9e-25 119.4 117 57.3
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 4.2e-25 118.2 116 56.0
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 5.5e-25 117.9 120 56.7
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 5.5e-25 117.9 116 56.9
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 5.5e-25 117.9 119 58.0
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 7.2e-25 117.5 122 52.5
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 9.3e-25 117.1 111 54.1
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.7e-24 115.5 123 55.3
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 4.6e-24 114.8 64 85.9
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 4.6e-24 114.8 116 56.0
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 6.1e-24 114.4 120 52.5
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 1.0e-23 113.6 113 54.9
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 1.3e-23 113.2 105 62.9
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 2.3e-23 112.5 115 54.8
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 2.3e-23 112.5 120 53.3
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 3.0e-23 112.1 68 76.5
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 8.7e-23 110.5 112 55.4
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 3.3e-22 108.6 85 63.5
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 4.3e-22 108.2 105 60.0
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 5.7e-22 107.8 117 53.0
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 5.7e-22 107.8 141 49.6
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 9.7e-22 107.1 120 50.8
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 3.7e-21 105.1 66 74.2
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 2.4e-20 102.4 114 47.4
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 4.1e-20 101.7 84 63.1
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 6.9e-20 100.9 79 67.1
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 9.0e-20 100.5 87 59.8
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 1.2e-19 100.1 118 48.3
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 1.5e-19 99.8 118 47.5
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 3.4e-19 98.6 104 51.0
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 3.4e-19 98.6 64 71.9
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 4.5e-19 98.2 63 69.8
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 7.7e-19 97.4 112 50.0
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 1.0e-18 97.1 115 47.8
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 1.3e-18 96.7 122 47.5
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 1.7e-18 96.3 118 47.5
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 2.9e-18 95.5 105 53.3
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 5.0e-18 94.7 124 47.6
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 8.5e-18 94.0 121 44.6
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 4.2e-17 91.7 102 52.9
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 4.6e-16 88.2 120 45.0
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 6.1e-16 87.8 118 43.2
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 5.1e-15 84.7 109 53.2
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.5e-14 82.4 84 51.2
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 3.7e-13 78.6 101 47.5
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 6.3e-13 77.8 84 50.0
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 3.1e-12 75.5 115 47.0
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 2.0e-11 72.8 87 47.1
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 3.4e-11 72.0 69 52.2
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 4.5e-11 71.6 118 39.0
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 1.2e-08 63.5 83 43.4
SEGI_16463 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 7.9e-08 60.8 54 59.3
CiPaw.09G207700 Carya illinoinensis HOM05D007113 ORTHO05D008859 1.1e-06 57.0 119 42.9
Peaxi162Scf01313g00026 Petunia axillaris HOM05D007113 ORTHO05D008859 1.5e-06 56.6 31 83.9
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 9.7e-06 53.9 52 55.8


User provided reference genes

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