Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2346 Ceratophyllum demersum HOM05D002060 ORTHO05D002098 8.4e-154 547.0 274 100.0
CDE07G0905 Ceratophyllum demersum HOM05D002060 ORTHO05D002098 9.6e-57 224.6 163 74.8
CDE04G1025 Ceratophyllum demersum HOM05D002060 ORTHO05D002098 2.2e-21 107.1 183 38.8
CDE06G0126 Ceratophyllum demersum HOM05D002060 ORTHO05D002098 6.1e-19 99.0 182 34.1
TAR629G1814 Trochodendron aralioides HOM05D002060 ORTHO05D002098 4.8e-16 89.4 189 34.4
Nn3g17407 Nelumbo nucifera HOM05D002060 ORTHO05D002098 2.0e-14 84.0 205 31.2
TAR371G0965 Trochodendron aralioides HOM05D002060 ORTHO05D002098 2.6e-14 83.6 192 32.3
MBI19_g05182_MAGBIO Magnolia biondii HOM05D002060 ORTHO05D002098 1.0e-13 81.6 177 30.5
DCAR_025421 Daucus carota HOM05D002060 ORTHO05D002098 3.8e-13 79.7 171 39.2
RcHm_v2.0_Chr2g0166211 Rosa chinensis HOM05D002060 ORTHO05D002098 2.5e-12 77.0 172 33.1
FAN14G1077 Fragaria x ananassa HOM05D002060 ORTHO05D002098 1.6e-11 74.3 167 34.1
TAR622G1434 Trochodendron aralioides HOM05D002060 ORTHO05D002098 2.1e-11 73.9 199 30.7
FAN02G2985 Fragaria x ananassa HOM05D002060 ORTHO05D002098 4.7e-11 72.8 170 35.3
MD09G1063100 Malus domestica HOM05D002060 ORTHO05D002098 4.7e-11 72.8 177 33.3
Aa31LG11G14070 Aethionema arabicum HOM05D002060 ORTHO05D002098 6.1e-11 72.4 178 33.1
EL10Ac2g03120 Beta vulgaris HOM05D002060 ORTHO05D002098 6.1e-11 72.4 169 34.3
GSVIVG01011508001 Vitis vinifera HOM05D002060 ORTHO05D002098 6.1e-11 72.4 160 33.1
Gohir.A09G010500 Gossypium hirsutum HOM05D002060 ORTHO05D002098 7.9e-11 72.0 185 29.7
AT3G01015 Arabidopsis thaliana HOM05D002060 ORTHO05D002098 1.0e-10 71.6 161 34.8
A03p32760 Brassica napus HOM05D002060 ORTHO05D002098 1.0e-10 71.6 167 35.3
BraA03t12445Z Brassica rapa HOM05D002060 ORTHO05D002098 1.0e-10 71.6 167 35.3
FAN09G2487 Fragaria x ananassa HOM05D002060 ORTHO05D002098 1.0e-10 71.6 171 33.3
Prupe.3G257100 Prunus persica HOM05D002060 ORTHO05D002098 1.0e-10 71.6 169 34.3
Actinidia01986 Actinidia chinensis HOM05D002060 ORTHO05D002098 1.4e-10 71.2 198 30.8
Phvul.004G034600 Phaseolus vulgaris HOM05D002060 ORTHO05D002098 1.4e-10 71.2 168 32.7
Duzib264G1038 Durio zibethinus HOM05D002060 ORTHO05D002098 1.8e-10 70.9 178 30.9
Potri.004G118700 Populus trichocarpa HOM05D002060 ORTHO05D002098 2.3e-10 70.5 190 30.5
Aqoxy3G03590 Aquilegia oxysepala HOM05D002060 ORTHO05D002098 3.0e-10 70.1 194 30.4
Oeu023713.2 Olea europaea HOM05D002060 ORTHO05D002098 3.0e-10 70.1 165 33.3
CiPaw.04G057300 Carya illinoinensis HOM05D002060 ORTHO05D002098 3.9e-10 69.7 174 33.3
Dinv33820 Davidia involucrata HOM05D002060 ORTHO05D002098 3.9e-10 69.7 199 28.1
VMungo0464G0669 Vigna mungo HOM05D002060 ORTHO05D002098 3.9e-10 69.7 173 30.1
Glyma.19G028600 Glycine max HOM05D002060 ORTHO05D002098 6.7e-10 68.9 171 30.4
Carub.0003s0118 Capsella rubella HOM05D002060 ORTHO05D002098 8.8e-10 68.6 164 37.8
Lju41A4T69 Lonicera japonica HOM05D002060 ORTHO05D002098 8.8e-10 68.6 180 31.1
SalBow1G3233 Salvia bowleyana HOM05D002060 ORTHO05D002098 8.8e-10 68.6 165 31.5
TWI34G0351 Tripterygium wilfordii HOM05D002060 ORTHO05D002098 8.8e-10 68.6 180 30.6
Thhalv10020582m.g Eutrema salsugineum HOM05D002060 ORTHO05D002098 1.1e-09 68.2 174 34.5
Ah.12g062660 Amaranthus hybridus HOM05D002060 ORTHO05D002098 1.5e-09 67.8 185 29.7
FAN05G3685 Fragaria x ananassa HOM05D002060 ORTHO05D002098 3.3e-09 66.6 170 32.9
Gohir.D09G009600 Gossypium hirsutum HOM05D002060 ORTHO05D002098 3.3e-09 66.6 185 29.2
Thecc.04G092600 Theobroma cacao HOM05D002060 ORTHO05D002098 3.3e-09 66.6 179 28.5
AUR62042424 Chenopodium quinoa HOM05D002060 ORTHO05D002098 4.4e-09 66.2 172 32.0
PSO017G2611 Papaver somniferum HOM05D002060 ORTHO05D002098 4.4e-09 66.2 211 29.9
CSS0004087 Camellia sinensis var. sinensis HOM05D002060 ORTHO05D002098 5.7e-09 65.9 193 30.1
CSS0028622 Camellia sinensis var. sinensis HOM05D002060 ORTHO05D002098 5.7e-09 65.9 193 30.1
Hma1.2p1_0481F.1_g161980 Hydrangea macrophylla HOM05D002060 ORTHO05D002098 5.7e-09 65.9 195 29.2
QL02p039183 Quercus lobata HOM05D002060 ORTHO05D002098 5.7e-09 65.9 193 31.6
Hund13160 Selenicereus undatus HOM05D002060 ORTHO05D002098 5.7e-09 65.9 190 32.1
AL3G11270 Arabidopsis lyrata HOM05D002060 ORTHO05D002098 7.4e-09 65.5 162 35.2
AL6G26360 Arabidopsis lyrata HOM05D002060 ORTHO05D002098 7.4e-09 65.5 166 29.5
BcaC01g04491 Brassica carinata HOM05D002060 ORTHO05D002098 7.4e-09 65.5 169 33.7
CAN.G979.6 Capsicum annuum HOM05D002060 ORTHO05D002098 7.4e-09 65.5 167 32.3
Ciclev10011468m.g Citrus clementina HOM05D002060 ORTHO05D002098 7.4e-09 65.5 179 31.8
FvH4_6g47160 Fragaria vesca HOM05D002060 ORTHO05D002098 7.4e-09 65.5 171 32.2
Sp6g28590 Schrenkiella parvula HOM05D002060 ORTHO05D002098 7.4e-09 65.5 209 28.7
THA.LOC104822338 Tarenaya hassleriana HOM05D002060 ORTHO05D002098 7.4e-09 65.5 185 33.5
BcaC01g04460 Brassica carinata HOM05D002060 ORTHO05D002098 9.7e-09 65.1 166 34.3
C03p39860 Brassica napus HOM05D002060 ORTHO05D002098 9.7e-09 65.1 166 34.3
CARHR197800 Cardamine hirsuta HOM05D002060 ORTHO05D002098 9.7e-09 65.1 173 31.8
Thhalv10013627m.g Eutrema salsugineum HOM05D002060 ORTHO05D002098 9.7e-09 65.1 185 30.8
Gohir.A12G087200 Gossypium hirsutum HOM05D002060 ORTHO05D002098 9.7e-09 65.1 180 31.1
Gohir.D12G085300 Gossypium hirsutum HOM05D002060 ORTHO05D002098 9.7e-09 65.1 180 30.0
HanXRQChr14g0450091 Helianthus annuus HOM05D002060 ORTHO05D002098 9.7e-09 65.1 166 30.1
Gorai.006G011300 Gossypium raimondii HOM05D002060 ORTHO05D002098 1.3e-08 64.7 172 28.5
Phvul.004G034700 Phaseolus vulgaris HOM05D002060 ORTHO05D002098 1.3e-08 64.7 174 28.7
Medtr6g015010 Medicago truncatula HOM05D002060 ORTHO05D002098 1.7e-08 64.3 182 28.6
Sed0010755 Sechium edule HOM05D002060 ORTHO05D002098 2.2e-08 63.9 188 30.3
BcaC01g04492 Brassica carinata HOM05D002060 ORTHO05D002098 2.8e-08 63.5 170 32.9
Hma1.2p1_0029F.1_g018100 Hydrangea macrophylla HOM05D002060 ORTHO05D002098 2.8e-08 63.5 212 28.3
Manes.02G053500 Manihot esculenta HOM05D002060 ORTHO05D002098 2.8e-08 63.5 205 31.7
MSTRG.3349 Avicennia marina HOM05D002060 ORTHO05D002098 3.7e-08 63.2 176 30.7
AUR62018170 Chenopodium quinoa HOM05D002060 ORTHO05D002098 3.7e-08 63.2 173 32.4
Cc07_g03980 Coffea canephora HOM05D002060 ORTHO05D002098 3.7e-08 63.2 200 29.0
Sp3g01130 Schrenkiella parvula HOM05D002060 ORTHO05D002098 3.7e-08 63.2 155 34.8
TWI60G0152 Tripterygium wilfordii HOM05D002060 ORTHO05D002098 3.7e-08 63.2 188 29.8
Gorai.008G095700 Gossypium raimondii HOM05D002060 ORTHO05D002098 4.8e-08 62.8 178 28.7
CAN.G398.9 Capsicum annuum HOM05D002060 ORTHO05D002098 6.3e-08 62.4 219 26.5
Lj2g0004119 Lotus japonicus HOM05D002060 ORTHO05D002098 6.3e-08 62.4 172 29.7
arahy.Tifrunner.gnm1.ann1.882L60 Arachis hypogaea HOM05D002060 ORTHO05D002098 8.2e-08 62.0 269 23.4
Cpa.g.sc14.165 Carica papaya HOM05D002060 ORTHO05D002098 8.2e-08 62.0 189 30.7
Glyma.13G057600 Glycine max HOM05D002060 ORTHO05D002098 8.2e-08 62.0 183 27.3
Potri.017G092100 Populus trichocarpa HOM05D002060 ORTHO05D002098 8.2e-08 62.0 226 29.6
TPR.G9999 Trifolium pratense HOM05D002060 ORTHO05D002098 1.4e-07 61.2 200 28.5
arahy.Tifrunner.gnm1.ann1.K6HCQ9 Arachis hypogaea HOM05D002060 ORTHO05D002098 1.8e-07 60.8 269 23.0
Cfa007644 Carpinus fangiana HOM05D002060 ORTHO05D002098 1.8e-07 60.8 195 31.8
CDE07G0257 Ceratophyllum demersum HOM05D000001 ORTHO05D129923 1.8e-07 60.8 25 100.0
PSO478G1573 Papaver somniferum HOM05D002060 ORTHO05D002098 1.8e-07 60.8 187 29.4
Atru.chr8.414 Acer truncatum HOM05D002060 ORTHO05D002098 2.4e-07 60.5 178 30.3
BolC3t16249H Brassica oleracea HOM05D002060 ORTHO05D002098 3.1e-07 60.1 170 32.9
Sabra04G0068600 Salix brachista HOM05D002060 ORTHO05D002098 3.1e-07 60.1 190 28.9
Carub.0006s1367 Capsella rubella HOM05D002060 ORTHO05D002098 4.1e-07 59.7 155 32.3
Ca_04299_v3 Cicer arietinum L. HOM05D002060 ORTHO05D002098 4.1e-07 59.7 203 28.1
Lsat_1_v5_gn_2_87661 Lactuca sativa HOM05D002060 ORTHO05D002098 4.1e-07 59.7 197 30.5
Sabra17G0081100 Salix brachista HOM05D002060 ORTHO05D002098 5.3e-07 59.3 188 29.3
PGR004G2324 Punica granatum HOM05D002060 ORTHO05D002098 6.9e-07 58.9 192 29.2
Migut.K01279 Erythranthe guttata HOM05D002060 ORTHO05D002098 9.1e-07 58.5 176 30.7
PGSC0003DMG400025143 Solanum tuberosum HOM05D002060 ORTHO05D002098 9.1e-07 58.5 218 24.3
Aa31LG5G12610 Aethionema arabicum HOM05D002060 ORTHO05D002098 2.0e-06 57.4 158 31.6
CiPaw.03G090300 Carya illinoinensis HOM05D002060 ORTHO05D002098 2.0e-06 57.4 189 29.6
Sopen02g016180 Solanum pennellii HOM05D002060 ORTHO05D002098 2.0e-06 57.4 221 25.3
CsaV3_5G038450 Cucumis sativus L. HOM05D002060 ORTHO05D002098 2.6e-06 57.0 185 28.1
MBI16_g20811_MAGBIO Magnolia biondii HOM05D002060 ORTHO05D002098 2.6e-06 57.0 109 34.9
MBI16_g19290_MAGBIO Magnolia biondii HOM05D002060 ORTHO05D002098 3.4e-06 56.6 93 37.6
CANSAT64G1295 Cannabis sativa HOM05D002060 ORTHO05D002098 4.5e-06 56.2 208 26.4
Haze_14450 Corylus avellana HOM05D002060 ORTHO05D002098 4.5e-06 56.2 195 29.2
MD17G1057000 Malus domestica HOM05D002060 ORTHO05D002098 4.5e-06 56.2 177 28.8
CSS0010449 Camellia sinensis var. sinensis HOM05D002060 ORTHO05D002098 5.9e-06 55.8 174 28.7
THA.LOC104821005 Tarenaya hassleriana HOM05D002060 ORTHO05D002098 5.9e-06 55.8 189 29.1
HanXRQChr17g0551801 Helianthus annuus HOM05D002060 ORTHO05D002098 7.7e-06 55.5 128 31.2
Lalb_Chr02g0158991 Lupinus albus HOM05D002060 ORTHO05D002098 7.7e-06 55.5 108 35.2
Sc10g0004610 Simmondsia chinensis HOM05D002060 ORTHO05D002098 7.7e-06 55.5 189 27.5


User provided reference genes

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