Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 3.1e-116 421.8 210 100.0
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 6.9e-55 218.0 182 56.6
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 2.9e-53 212.6 210 51.0
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 1.9e-52 209.9 190 53.7
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 2.1e-51 206.5 201 51.2
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 2.1e-51 206.5 201 51.2
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 3.5e-51 205.7 177 54.8
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 3.5e-51 205.7 182 52.2
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 3.3e-49 199.1 210 47.1
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 7.3e-49 198.0 201 47.8
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 1.3e-48 197.2 190 48.4
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 3.6e-48 195.7 201 45.8
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 8.1e-48 194.5 195 49.7
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 1.1e-47 194.1 208 46.2
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 1.4e-47 193.7 205 47.3
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 4.0e-47 192.2 211 48.3
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 5.3e-47 191.8 202 44.1
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 6.9e-47 191.4 210 46.7
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 6.9e-47 191.4 205 43.9
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 3.4e-46 189.1 177 49.7
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 7.6e-46 188.0 204 45.6
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 7.6e-46 188.0 210 47.1
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 7.6e-46 188.0 211 45.5
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 1.7e-45 186.8 204 45.1
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 1.7e-45 186.8 183 48.6
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 3.8e-45 185.7 205 44.4
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 3.8e-45 185.7 205 44.4
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 1.1e-44 184.1 186 46.8
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 1.4e-44 183.7 180 49.4
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 1.9e-44 183.3 210 45.7
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 1.9e-44 183.3 178 47.8
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 1.9e-44 183.3 189 47.6
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 4.2e-44 182.2 205 42.9
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 5.4e-44 181.8 195 47.7
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 7.1e-44 181.4 206 46.6
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 9.3e-44 181.0 180 47.2
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 2.7e-43 179.5 201 44.8
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 6.0e-43 178.3 177 46.9
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 1.0e-42 177.6 182 48.9
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 1.0e-42 177.6 195 46.7
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 3.0e-42 176.0 197 47.2
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 3.0e-42 176.0 197 46.7
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 3.0e-42 176.0 197 46.7
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 3.9e-42 175.6 197 47.2
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 6.7e-42 174.9 195 45.6
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 8.7e-42 174.5 181 49.2
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 1.1e-41 174.1 202 44.1
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 1.5e-41 173.7 210 42.9
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 1.9e-41 173.3 195 44.6
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 2.5e-41 172.9 210 44.3
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 5.6e-41 171.8 206 45.6
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.3e-40 170.6 278 36.3
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 3.7e-40 169.1 203 42.4
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 4.8e-40 168.7 195 43.6
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 1.8e-39 166.8 211 42.7
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 1.8e-39 166.8 210 43.8
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 3.1e-39 166.0 211 43.1
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 3.1e-39 166.0 191 45.0
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 5.3e-39 165.2 199 40.7
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 6.9e-39 164.9 206 44.7
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 6.9e-39 164.9 186 43.5
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 6.9e-39 164.9 186 44.6
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 9.0e-39 164.5 191 44.5
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 1.2e-38 164.1 211 42.2
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 1.2e-38 164.1 210 42.9
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.6e-38 162.9 204 39.7
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 4.5e-38 162.2 211 42.2
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 4.5e-38 162.2 183 43.7
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 4.5e-38 162.2 192 42.7
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 1.0e-37 161.0 211 42.7
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 1.0e-37 161.0 197 43.7
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 1.0e-37 161.0 189 43.9
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 1.3e-37 160.6 204 39.2
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 1.7e-37 160.2 211 43.1
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 2.2e-37 159.8 211 42.2
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 2.9e-37 159.5 171 43.9
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.9e-37 159.5 204 38.7
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 2.9e-37 159.5 188 43.6
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 3.8e-37 159.1 206 42.2
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 6.5e-37 158.3 206 42.7
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 6.5e-37 158.3 189 44.4
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 8.4e-37 157.9 204 38.7
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 8.4e-37 157.9 204 38.7
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 3.2e-36 156.0 179 44.7
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 7.1e-36 154.8 208 39.9
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 3.0e-34 149.4 182 40.7
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 3.9e-34 149.1 211 41.2
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 1.5e-30 137.1 208 39.4
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 1.3e-29 134.0 177 36.2
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 7.1e-28 128.3 195 39.0
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 1.6e-24 117.1 122 48.4
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 1.8e-23 113.6 132 46.2
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 5.5e-20 102.1 127 43.3
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 3.6e-19 99.4 127 42.5
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 7.9e-19 98.2 83 51.8
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 1.1e-17 94.4 86 47.7
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 1.1e-17 94.4 122 36.9
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 1.5e-17 94.0 208 33.2
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 9.7e-17 91.3 125 38.4
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 2.2e-16 90.1 183 33.3
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 1.5e-14 84.0 78 53.8
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 1.5e-14 84.0 190 27.9
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 5.9e-14 82.0 87 48.3
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 2.5e-12 76.6 61 55.7
AagrBONN_evm.TU.Sc2ySwM_117.1072 Anthoceros agrestis HOM05D007171 ORTHO05D008946 3.9e-10 69.3 174 26.4
CBR_g5643 Chara braunii HOM05D062952 ORTHO05D008946 4.4e-09 65.9 211 23.2
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 4.4e-09 65.9 69 47.8


User provided reference genes

Program Settings